RNA–Protein interactions for RNA: ENST00000509009.5

PDPN-208, Transcript of podoplanin, humanhuman

TSL 4 BASIC

Gene PDPN, Length 571 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-208ENST00000509009 OR11H4Q8NGC9 324 aa8.3□□□□□ -1.08
PDPN-208ENST00000509009 SFRP2Q96HF1 295 aa8.3□□□□□ -1.08
PDPN-208ENST00000509009 TMEM70Q9BUB7 260 aa8.3□□□□□ -1.08
PDPN-208ENST00000509009 DAZ3Q9NR90 486 aaKnown RBP8.3□□□□□ -1.08
PDPN-208ENST00000509009 FAM30AQ9NZY2 134 aa8.3□□□□□ -1.08
PDPN-208ENST00000509009 FLG2Q5D862 2391 aaPredicted RBP8.3□□□□□ -1.08
PDPN-208ENST00000509009 TMSB15BA0A087X1C1 80 aa8.29□□□□□ -1.08
PDPN-208ENST00000509009 TRAV8-3A0A0A6YYJ7 113 aa8.29□□□□□ -1.08
PDPN-208ENST00000509009 RHODO00212 210 aa8.29□□□□□ -1.08
PDPN-208ENST00000509009 LTAP01374 205 aa8.29□□□□□ -1.08
PDPN-208ENST00000509009 HAMPP81172 84 aa8.29□□□□□ -1.08
PDPN-208ENST00000509009 WFDC2Q14508 124 aa8.29□□□□□ -1.08
PDPN-208ENST00000509009 STOML3Q8TAV4 291 aa8.29□□□□□ -1.08
PDPN-208ENST00000509009 TCEAL7Q9BRU2 100 aa8.29□□□□□ -1.08
PDPN-208ENST00000509009 PHLDA3Q9Y5J5 127 aa8.29□□□□□ -1.08
PDPN-208ENST00000509009 A0A087WWL8 130 aa8.28□□□□□ -1.08
PDPN-208ENST00000509009 SMLR1H3BR10 107 aa8.28□□□□□ -1.08
PDPN-208ENST00000509009 PAGE4O60829 102 aa8.28□□□□□ -1.08
PDPN-208ENST00000509009 TPT1P13693 172 aaKnown RBP8.28□□□□□ -1.08
PDPN-208ENST00000509009 LINC01559Q495D7 138 aa8.28□□□□□ -1.08
PDPN-208ENST00000509009 FAM74A4Q5TZK3 123 aa8.28□□□□□ -1.08
PDPN-208ENST00000509009 KCNRGQ8N5I3 272 aa8.28□□□□□ -1.08
PDPN-208ENST00000509009 MBD3L1Q8WWY6 194 aa8.28□□□□□ -1.08
PDPN-208ENST00000509009 HERC1Q15751 4861 aa8.28□□□□□ -1.08
PDPN-208ENST00000509009 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
PDPN-208ENST00000509009 M0R381 172 aa8.27□□□□□ -1.09
PDPN-208ENST00000509009 C1QBP02746 253 aa8.27□□□□□ -1.09
PDPN-208ENST00000509009 TOR2AQ5JU69 321 aa8.27□□□□□ -1.09
PDPN-208ENST00000509009 NIT1Q86X76 327 aa8.27□□□□□ -1.09
PDPN-208ENST00000509009 SFT2D1Q8WV19 159 aa8.27□□□□□ -1.09
PDPN-208ENST00000509009 SEC11BP0C7V7 166 aa8.26□□□□□ -1.09
PDPN-208ENST00000509009 AKR1C3P42330 323 aa8.26□□□□□ -1.09
PDPN-208ENST00000509009 DNAH8Q96JB1 4490 aa8.26□□□□□ -1.09
PDPN-208ENST00000509009 TRBV10-1A0A0K0K1A3 114 aa8.25□□□□□ -1.09
PDPN-208ENST00000509009 UMAD1C9J7I0 102 aa8.25□□□□□ -1.09
PDPN-208ENST00000509009 LECT2O14960 151 aa8.25□□□□□ -1.09
PDPN-208ENST00000509009 S100A9P06702 114 aaKnown RBP8.25□□□□□ -1.09
PDPN-208ENST00000509009 ZNF345Q14585 488 aa8.25□□□□□ -1.09
PDPN-208ENST00000509009 ZFP82Q8N141 532 aa8.25□□□□□ -1.09
PDPN-208ENST00000509009 FAM213BQ8TBF2 198 aa8.25□□□□□ -1.09
PDPN-208ENST00000509009 BAALCQ8WXS3 180 aa8.25□□□□□ -1.09
PDPN-208ENST00000509009 DNAJC30Q96LL9 226 aa8.25□□□□□ -1.09
PDPN-208ENST00000509009 MLST8Q9BVC4 326 aa8.25□□□□□ -1.09
PDPN-208ENST00000509009 COX11Q9Y6N1 276 aa8.25□□□□□ -1.09
PDPN-208ENST00000509009 TRBV7-3A0A075B6L6 115 aa8.24□□□□□ -1.09
PDPN-208ENST00000509009 HMSDA8MTL9 139 aa8.24□□□□□ -1.09
PDPN-208ENST00000509009 UBE2D3P61077 147 aa8.24□□□□□ -1.09
PDPN-208ENST00000509009 UBE2D2P62837 147 aa8.24□□□□□ -1.09
PDPN-208ENST00000509009 RPL36AP83881 106 aaKnown RBP8.24□□□□□ -1.09
PDPN-208ENST00000509009 RPL19P84098 196 aaKnown RBP8.24□□□□□ -1.09
PDPN-208ENST00000509009 BAGE2Q86Y30 109 aa8.24□□□□□ -1.09
PDPN-208ENST00000509009 RPL36ALQ969Q0 106 aaKnown RBP8.24□□□□□ -1.09
PDPN-208ENST00000509009 KLK12Q9UKR0 248 aa8.24□□□□□ -1.09
PDPN-208ENST00000509009 URGCP-MRPS24S4R325 110 aa8.24□□□□□ -1.09
PDPN-208ENST00000509009 MYCBP2O75592 4640 aa8.23□□□□□ -1.09
PDPN-208ENST00000509009 A0A0D9SG52 128 aa8.23□□□□□ -1.09
PDPN-208ENST00000509009 A0A1B0GV50 99 aa8.23□□□□□ -1.09
PDPN-208ENST00000509009 SCO2A0A1W2PP80 73 aa8.23□□□□□ -1.09
PDPN-208ENST00000509009 RAB4BP61018 213 aa8.23□□□□□ -1.09
PDPN-208ENST00000509009 TMUB2Q71RG4 321 aa8.23□□□□□ -1.09
PDPN-208ENST00000509009 OR10G8Q8NGN5 311 aa8.23□□□□□ -1.09
PDPN-208ENST00000509009 OR10AG1Q8NH19 301 aa8.23□□□□□ -1.09
PDPN-208ENST00000509009 RMI2Q96E14 147 aa8.23□□□□□ -1.09
PDPN-208ENST00000509009 SSBP4Q9BWG4 385 aaPredicted RBP8.23□□□□□ -1.09
PDPN-208ENST00000509009 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.22□□□□□ -1.09
PDPN-208ENST00000509009 IGKV2D-24A0A075B6R9 120 aa8.22□□□□□ -1.09
PDPN-208ENST00000509009 A0A087WX48 190 aa8.22□□□□□ -1.09
PDPN-208ENST00000509009 CXCL1P09341 107 aa8.22□□□□□ -1.09
PDPN-208ENST00000509009 H2AFB1P0C5Y9 115 aa8.22□□□□□ -1.09
PDPN-208ENST00000509009 PRR27Q6MZM9 219 aa8.22□□□□□ -1.09
PDPN-208ENST00000509009 Q6ZSA8 131 aa8.22□□□□□ -1.09
PDPN-208ENST00000509009 Q8N976 141 aa8.22□□□□□ -1.09
PDPN-208ENST00000509009 CHCHD7Q9BUK0 85 aa8.22□□□□□ -1.09
PDPN-208ENST00000509009 ZNF471Q9BX82 626 aaPredicted RBP8.22□□□□□ -1.09
PDPN-208ENST00000509009 MUC21A0A0G2JKD1 596 aa8.21□□□□□ -1.1
PDPN-208ENST00000509009 MUC21A0A140T8X8 626 aa8.21□□□□□ -1.1
PDPN-208ENST00000509009 BCL2L11O43521 198 aa8.21□□□□□ -1.1
PDPN-208ENST00000509009 SNAI2O43623 268 aa8.21□□□□□ -1.1
PDPN-208ENST00000509009 ELOBQ15370 118 aa8.21□□□□□ -1.1
PDPN-208ENST00000509009 NEXN-AS1Q8NBZ9 246 aa8.21□□□□□ -1.1
PDPN-208ENST00000509009 UBE2WQ96B02 151 aa8.21□□□□□ -1.1
PDPN-208ENST00000509009 hCG_2014768A0A024R1R8 64 aa8.2□□□□□ -1.1
PDPN-208ENST00000509009 TRBV6-8A0A0A6YYG3 113 aa8.2□□□□□ -1.1
PDPN-208ENST00000509009 KANTRA0A1W2PQU2 76 aa8.2□□□□□ -1.1
PDPN-208ENST00000509009 TMEM262E9PQX1 116 aa8.2□□□□□ -1.1
PDPN-208ENST00000509009 PFDN1O60925 122 aa8.2□□□□□ -1.1
PDPN-208ENST00000509009 OR5AL1P0C617 328 aa8.2□□□□□ -1.1
PDPN-208ENST00000509009 CCL20P78556 96 aa8.2□□□□□ -1.1
PDPN-208ENST00000509009 LINC01620Q4KN68 170 aa8.2□□□□□ -1.1
PDPN-208ENST00000509009 ATRAIDQ6UW56 229 aa8.2□□□□□ -1.1
PDPN-208ENST00000509009 RBFOX3A6NFN3 312 aa8.19□□□□□ -1.1
PDPN-208ENST00000509009 EIF5AP63241 154 aaKnown RBP8.19□□□□□ -1.1
PDPN-208ENST00000509009 KCNIP4Q6PIL6 250 aa8.19□□□□□ -1.1
PDPN-208ENST00000509009 ENHOQ6UWT2 76 aa8.19□□□□□ -1.1
PDPN-208ENST00000509009 F5H697 171 aa8.18□□□□□ -1.1
PDPN-208ENST00000509009 RPL35P42766 123 aaKnown RBP8.18□□□□□ -1.1
PDPN-208ENST00000509009 SSTP61278 116 aa8.18□□□□□ -1.1
PDPN-208ENST00000509009 Q0VG73 95 aa8.18□□□□□ -1.1
PDPN-208ENST00000509009 ZNF56Q15929 161 aa8.18□□□□□ -1.1
PDPN-208ENST00000509009 SPANXN1Q5VSR9 72 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms