RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 LEPP41159 167 aa3.47□□□□□ -1.85
PDLIM5-211ENST00000508531 ZNF138P52744 262 aa3.47□□□□□ -1.85
PDLIM5-211ENST00000508531 PDE6HQ13956 83 aa3.47□□□□□ -1.85
PDLIM5-211ENST00000508531 GTSCR1Q86UQ5 136 aa3.47□□□□□ -1.85
PDLIM5-211ENST00000508531 SRSF12Q8WXF0 261 aaKnown RBP3.47□□□□□ -1.85
PDLIM5-211ENST00000508531 ASCL2Q99929 193 aa3.47□□□□□ -1.85
PDLIM5-211ENST00000508531 FOXC2Q99958 501 aa3.47□□□□□ -1.85
PDLIM5-211ENST00000508531 WI2-2373I1.2A0A1W2PRP0 233 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 C5orf63A6NC05 138 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 NDUFC2O95298 119 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 IGLV1-44P01699 117 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 IGHV4-34P06331 123 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 CD7P09564 240 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 ARMS2P0C7Q2 107 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 INAFM2P0DMQ5 153 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 PPP1CAP62136 330 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 MRPS36P82909 103 aaKnown RBP3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 ZNF415Q09FC8 603 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 LAGE3Q14657 143 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 DEFB110Q30KQ9 67 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 LINC01620Q4KN68 170 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 FAM53AQ6NSI3 398 aaPredicted RBP3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 LINC00305Q7Z4B0 112 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 COX8CQ7Z4L0 72 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 TRPT1Q86TN4 253 aaKnown RBP3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 ZCCHC24Q8N2G6 241 aaKnown RBP3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 SLC25A45Q8N413 288 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 ITLN1Q8WWA0 313 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 C18orf15Q96N68 181 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 DCTN5Q9BTE1 182 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 CNFNQ9BYD5 112 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 GNG12Q9UBI6 72 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 LAMTOR3Q9UHA4 124 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 KLF13Q9Y2Y9 288 aaPredicted RBP3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 SELENOKQ9Y6D0 94 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 V9GYY9 64 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 APCP25054 2843 aa3.46□□□□□ -1.86
PDLIM5-211ENST00000508531 IGKV2D-26A0A0A0MRZ7 120 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 IGHV1-45A0A0A0MS14 117 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 TRAV17A0A0B4J275 112 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 TRBV30A0A0K0K1B3 111 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 LOC389332A0A1B0GUA5 103 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 FAM236AA0A1B0GUQ0 79 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 FAM236BA0A1B0GV22 79 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 A0A1W2PR77 199 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 ZNF815PA8K554 130 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 KRTAP16-1A8MUX0 517 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 UPK2O00526 184 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 VCYO14598 125 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 RS1O15537 224 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 IGLV3-19P01714 112 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 GNG5P63218 68 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 CCL8P80075 99 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 EBI3Q14213 229 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 ZNF56Q15929 161 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 MRPL51Q4U2R6 128 aaKnown RBP3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 TMEM155Q4W5P6 130 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 SPINK9Q5DT21 86 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 C2orf82Q6UX34 121 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 SIGLEC15Q6ZMC9 328 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 SLC22A18ASQ8N1D0 253 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 RFESDQ8TAC1 157 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 PLEKHB2Q96CS7 222 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 ODF3Q96PU9 254 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 MCRIP2Q9BUT9 160 aaKnown RBP3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 Q9H3A6 140 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 EDA2RQ9HAV5 297 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 CALYQ9NYX4 217 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 RP1P56715 2156 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 NBEAL1Q6ZS30 2694 aa3.45□□□□□ -1.86
PDLIM5-211ENST00000508531 GTF3C1Q12789 2109 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 MYO7BQ6PIF6 2116 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 HIVEP3Q5T1R4 2406 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 EXPH5Q8NEV8 1989 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 IGLV3-12A0A075B6K2 115 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 TRAV40A0A0B4J280 105 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 IGHV1-69DA0A0B4J2H0 117 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 EFNA2O43921 213 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 RNASE2P10153 161 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 LMO4P61968 165 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 KLRB1Q12918 225 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 DEFB109BQ30KR1 87 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 GUSBP11Q6P575 273 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 PRNTQ86SH4 94 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 C11orf53Q8IXP5 236 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 SLC25A29Q8N8R3 303 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 DAND5Q8N907 189 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 FLYWCH2Q96CP2 140 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 DEFB126Q9BYW3 111 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 MRPL35Q9NZE8 188 aaKnown RBP3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 U3KQA8 63 aa3.44□□□□□ -1.86
PDLIM5-211ENST00000508531 FN1P02751 2386 aaKnown RBP3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 TRAV13-1A0A0B4J241 112 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 MRPL33O75394 65 aaKnown RBP3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 PYYP10082 97 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 COX6A1P12074 109 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 GP9P14770 177 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 LIFP15018 202 aa3.43□□□□□ -1.86
PDLIM5-211ENST00000508531 PSMB8P28062 276 aa3.43□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 158.2 ms