RNA–Protein interactions for RNA: ENST00000508357.5

PTPN20-218, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best)

Gene PTPN20, Length 1,213 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-218ENST00000508357 OR5AL1P0C617 328 aa8.47□□□□□ -1.05
PTPN20-218ENST00000508357 SRIP30626 198 aa8.47□□□□□ -1.05
PTPN20-218ENST00000508357 SRSF3P84103 164 aaKnown RBP8.47□□□□□ -1.05
PTPN20-218ENST00000508357 MRPL23Q16540 153 aaKnown RBP8.47□□□□□ -1.05
PTPN20-218ENST00000508357 ZFP2Q6ZN57 461 aa8.47□□□□□ -1.05
PTPN20-218ENST00000508357 ZFP82Q8N141 532 aa8.47□□□□□ -1.05
PTPN20-218ENST00000508357 C14orf178Q8N769 122 aaPredicted RBP8.47□□□□□ -1.05
PTPN20-218ENST00000508357 SYT8Q8NBV8 401 aa8.47□□□□□ -1.05
PTPN20-218ENST00000508357 OR2D3Q8NGH3 330 aa8.47□□□□□ -1.05
PTPN20-218ENST00000508357 OCC1Q8TAD7 63 aa8.47□□□□□ -1.05
PTPN20-218ENST00000508357 RNASE7Q9H1E1 156 aaKnown RBP8.47□□□□□ -1.05
PTPN20-218ENST00000508357 NBDYA0A0U1RRE5 68 aa8.46□□□□□ -1.06
PTPN20-218ENST00000508357 CIDEAO60543 219 aa8.46□□□□□ -1.06
PTPN20-218ENST00000508357 NDUFS6O75380 124 aaKnown RBP8.46□□□□□ -1.06
PTPN20-218ENST00000508357 CEBPGP53567 150 aa8.46□□□□□ -1.06
PTPN20-218ENST00000508357 RHOHQ15669 191 aa8.46□□□□□ -1.06
PTPN20-218ENST00000508357 LYPD5Q6UWN5 251 aa8.46□□□□□ -1.06
PTPN20-218ENST00000508357 NEGR1Q7Z3B1 354 aa8.46□□□□□ -1.06
PTPN20-218ENST00000508357 NUDT10Q8NFP7 164 aa8.46□□□□□ -1.06
PTPN20-218ENST00000508357 NUDT11Q96G61 164 aa8.46□□□□□ -1.06
PTPN20-218ENST00000508357 EIF5A2Q9GZV4 153 aaKnown RBP8.46□□□□□ -1.06
PTPN20-218ENST00000508357 DNAH5Q8TE73 4624 aa8.45□□□□□ -1.06
PTPN20-218ENST00000508357 P01737 135 aa8.45□□□□□ -1.06
PTPN20-218ENST00000508357 FAM74A4Q5TZK3 123 aa8.45□□□□□ -1.06
PTPN20-218ENST00000508357 Q9H8V8 135 aa8.45□□□□□ -1.06
PTPN20-218ENST00000508357 RHODO00212 210 aa8.44□□□□□ -1.06
PTPN20-218ENST00000508357 WFDC10BQ8IUB3 73 aa8.44□□□□□ -1.06
PTPN20-218ENST00000508357 FER1L6-AS1Q8NA97 138 aa8.44□□□□□ -1.06
PTPN20-218ENST00000508357 SMIM7Q9BQ49 75 aa8.44□□□□□ -1.06
PTPN20-218ENST00000508357 KIF25-AS1Q9Y6Z4 181 aa8.44□□□□□ -1.06
PTPN20-218ENST00000508357 GAGE12JA6NER3 117 aa8.43□□□□□ -1.06
PTPN20-218ENST00000508357 CTRLP40313 264 aa8.43□□□□□ -1.06
PTPN20-218ENST00000508357 LINC00315P59091 139 aa8.43□□□□□ -1.06
PTPN20-218ENST00000508357 RPS20P60866 119 aaKnown RBP8.43□□□□□ -1.06
PTPN20-218ENST00000508357 GAGE1Q13065 139 aa8.43□□□□□ -1.06
PTPN20-218ENST00000508357 GAGE4Q13068 117 aa8.43□□□□□ -1.06
PTPN20-218ENST00000508357 GAGE5Q13069 117 aa8.43□□□□□ -1.06
PTPN20-218ENST00000508357 GAGE13Q4V321 117 aa8.43□□□□□ -1.06
PTPN20-218ENST00000508357 LINC01551Q86U37 167 aa8.43□□□□□ -1.06
PTPN20-218ENST00000508357 DAZAP1Q96EP5 407 aaKnown RBP8.43□□□□□ -1.06
PTPN20-218ENST00000508357 PRADC1Q9BSG0 188 aa8.43□□□□□ -1.06
PTPN20-218ENST00000508357 TPPP3Q9BW30 176 aa8.43□□□□□ -1.06
PTPN20-218ENST00000508357 RPP21Q9H633 154 aaKnown RBP8.43□□□□□ -1.06
PTPN20-218ENST00000508357 MSRB1Q9NZV6 116 aa8.43□□□□□ -1.06
PTPN20-218ENST00000508357 TIRAPP58753 221 aa8.42□□□□□ -1.06
PTPN20-218ENST00000508357 SSTP61278 116 aa8.42□□□□□ -1.06
PTPN20-218ENST00000508357 IFITM2Q01629 132 aa8.42□□□□□ -1.06
PTPN20-218ENST00000508357 SPANXN1Q5VSR9 72 aa8.42□□□□□ -1.06
PTPN20-218ENST00000508357 GTSF1Q8WW33 167 aa8.42□□□□□ -1.06
PTPN20-218ENST00000508357 BIN3Q9NQY0 253 aa8.42□□□□□ -1.06
PTPN20-218ENST00000508357 LY96Q9Y6Y9 160 aa8.42□□□□□ -1.06
PTPN20-218ENST00000508357 LRP1BQ9NZR2 4599 aa8.41□□□□□ -1.06
PTPN20-218ENST00000508357 A0A1B0GVY2 172 aa8.41□□□□□ -1.06
PTPN20-218ENST00000508357 LYZL1Q6UWQ5 148 aa8.41□□□□□ -1.06
PTPN20-218ENST00000508357 FAM231DQ6ZW35 169 aa8.41□□□□□ -1.06
PTPN20-218ENST00000508357 CNFNQ9BYD5 112 aa8.41□□□□□ -1.06
PTPN20-218ENST00000508357 ZNF727A8MUV8 499 aa8.4□□□□□ -1.06
PTPN20-218ENST00000508357 SIVA1O15304 175 aa8.4□□□□□ -1.06
PTPN20-218ENST00000508357 C1orf134Q5TEV5 83 aa8.4□□□□□ -1.06
PTPN20-218ENST00000508357 AP1S3Q96PC3 154 aa8.4□□□□□ -1.06
PTPN20-218ENST00000508357 A0A1W2PPQ1 181 aa8.39□□□□□ -1.07
PTPN20-218ENST00000508357 XKRY2A2RUG3 117 aa8.39□□□□□ -1.07
PTPN20-218ENST00000508357 DNAH10OSP0CZ25 163 aa8.39□□□□□ -1.07
PTPN20-218ENST00000508357 ZNF56Q15929 161 aa8.39□□□□□ -1.07
PTPN20-218ENST00000508357 TTC32Q5I0X7 151 aa8.39□□□□□ -1.07
PTPN20-218ENST00000508357 SH2D6Q7Z4S9 175 aa8.39□□□□□ -1.07
PTPN20-218ENST00000508357 C6orf223Q8N319 242 aa8.39□□□□□ -1.07
PTPN20-218ENST00000508357 Q8N3U1 123 aa8.39□□□□□ -1.07
PTPN20-218ENST00000508357 ATP6V0E2Q8NHE4 81 aa8.39□□□□□ -1.07
PTPN20-218ENST00000508357 HERC2O95714 4834 aa8.39□□□□□ -1.07
PTPN20-218ENST00000508357 KIAA1109Q2LD37 5005 aa8.38□□□□□ -1.07
PTPN20-218ENST00000508357 PRSS29PA6NIE9 313 aa8.38□□□□□ -1.07
PTPN20-218ENST00000508357 GATCO43716 136 aaKnown RBP8.38□□□□□ -1.07
PTPN20-218ENST00000508357 RAB4BP61018 213 aa8.38□□□□□ -1.07
PTPN20-218ENST00000508357 RPL23P62829 140 aaKnown RBP8.38□□□□□ -1.07
PTPN20-218ENST00000508357 CACNG7P62955 275 aa8.38□□□□□ -1.07
PTPN20-218ENST00000508357 CT83Q5H943 113 aa8.38□□□□□ -1.07
PTPN20-218ENST00000508357 Q6ZRN7 208 aaPredicted RBP8.38□□□□□ -1.07
PTPN20-218ENST00000508357 LINC00336Q6ZUF6 198 aa8.38□□□□□ -1.07
PTPN20-218ENST00000508357 NEXN-AS1Q8NBZ9 246 aa8.38□□□□□ -1.07
PTPN20-218ENST00000508357 ISOC2Q96AB3 205 aa8.38□□□□□ -1.07
PTPN20-218ENST00000508357 GTSF1LQ9H1H1 148 aa8.38□□□□□ -1.07
PTPN20-218ENST00000508357 TRBV10-1A0A0K0K1A3 114 aa8.37□□□□□ -1.07
PTPN20-218ENST00000508357 F2Z2F3 143 aa8.37□□□□□ -1.07
PTPN20-218ENST00000508357 EVI2AP22794 236 aa8.37□□□□□ -1.07
PTPN20-218ENST00000508357 ERVFC1-1P60608 527 aa8.37□□□□□ -1.07
PTPN20-218ENST00000508357 UBE2D3P61077 147 aa8.37□□□□□ -1.07
PTPN20-218ENST00000508357 UBE2D2P62837 147 aa8.37□□□□□ -1.07
PTPN20-218ENST00000508357 TNP2Q05952 138 aa8.37□□□□□ -1.07
PTPN20-218ENST00000508357 PEA15Q15121 130 aa8.37□□□□□ -1.07
PTPN20-218ENST00000508357 LELP1Q5T871 98 aa8.37□□□□□ -1.07
PTPN20-218ENST00000508357 OR10G8Q8NGN5 311 aa8.37□□□□□ -1.07
PTPN20-218ENST00000508357 TNFRSF18Q9Y5U5 241 aa8.37□□□□□ -1.07
PTPN20-218ENST00000508357 V9GYV3 84 aa8.37□□□□□ -1.07
PTPN20-218ENST00000508357 MGPP08493 103 aa8.36□□□□□ -1.07
PTPN20-218ENST00000508357 NTF3P20783 257 aa8.36□□□□□ -1.07
PTPN20-218ENST00000508357 FAM74A3Q4VXF1 159 aa8.36□□□□□ -1.07
PTPN20-218ENST00000508357 SUMO4Q6EEV6 95 aa8.36□□□□□ -1.07
PTPN20-218ENST00000508357 WDR73Q6P4I2 378 aa8.36□□□□□ -1.07
PTPN20-218ENST00000508357 OSTCQ9NRP0 149 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms