RNA–Protein interactions for RNA: ENST00000508342.5

NEDD4-208, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,235 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-208ENST00000508342 MRPS18AQ9NVS2 196 aaKnown RBP2.29□□□□□ -2.04
NEDD4-208ENST00000508342 MRPL36Q9P0J6 103 aaKnown RBP2.29□□□□□ -2.04
NEDD4-208ENST00000508342 ERG28Q9UKR5 140 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 TP53TG1Q9Y2A0 90 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 A0A1W2PRE2 83 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 NDUFC2-KCTD14E9PQ53 114 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 M0QXV9 152 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 KIR3DS1Q14943 382 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 ATP5L2Q7Z4Y8 100 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 ZNF524Q96C55 264 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 DEFB131BA0A096LNP1 70 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 IGHV7-4-1A0A0J9YVY3 117 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 A0A1B0GW54 56 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 C3orf84H3BNL1 204 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 ARMS2P0C7Q2 107 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 LINC01620Q4KN68 170 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 C11orf53Q8IXP5 236 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 LYPD1Q8N2G4 141 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 RSPO3Q9BXY4 272 aaPredicted RBP2.29□□□□□ -2.04
NEDD4-208ENST00000508342 A0A1B0GVG6 124 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 LINC01548A6NM66 108 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 IGF1P05019 195 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 C5orf24Q7Z6I8 188 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 Q8TAT8 98 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 C16orf74Q96GX8 76 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 DSCR8Q96T75 97 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 TIMM21Q9BVV7 248 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 PRO1933Q9H354 126 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 CSDC2Q9Y534 153 aaKnown RBP2.29□□□□□ -2.04
NEDD4-208ENST00000508342 DNAH12Q6ZR08 3092 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 TRAV8-1A0A0A6YYK1 113 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 SCO2A0A1W2PP80 73 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 RPL23P62829 140 aaKnown RBP2.29□□□□□ -2.04
NEDD4-208ENST00000508342 SRSF3P84103 164 aaKnown RBP2.29□□□□□ -2.04
NEDD4-208ENST00000508342 CD164Q04900 197 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 FHL1Q13642 323 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 OCIAD2Q56VL3 154 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 SFTA2Q6UW10 78 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 C5orf66Q9H5L9 145 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 U3KQE9 123 aa2.29□□□□□ -2.04
NEDD4-208ENST00000508342 TRBV5-7A0A0A0MS05 114 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 IGKV2-24A0A0C4DH68 120 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 RNF222A6NCQ9 220 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 CHKB-CPT1BH3BT56 60 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 SNAI2O43623 268 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 PRB4P10163 310 aaPredicted RBP2.28□□□□□ -2.04
NEDD4-208ENST00000508342 WDR87Q6ZQQ6 2873 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 TRAV8-2A0A0B4J237 113 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 IGHV3-38A0A0C4DH36 116 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 C2orf70A6NJV1 201 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 J3KT08 172 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 HLA-DRB4P13762 266 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 ADMP35318 185 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 KRTAP27-1Q3LI81 207 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 SPATA45Q537H7 98 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 RITA1Q96K30 269 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 B9D2Q9BPU9 175 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 HLA-DRB4X5D2U9 266 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 IGLV10-54A0A075B6I4 117 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 TRAV10A0A0B4J240 114 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 PDE6HQ13956 83 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 IGFL4Q6B9Z1 124 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 CHAC1Q9BUX1 264 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 HHLA3Q9XRX5 114 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 TRAV9-1A0A075B6T8 112 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 A0A087WZ39 114 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 SMIM9A6NGZ8 99 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 BCE1O60756 84 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 CCL20P78556 96 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 RETNQ9HD89 108 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 LY96Q9Y6Y9 160 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 STAB1Q9NY15 2570 aa2.28□□□□□ -2.04
NEDD4-208ENST00000508342 I3L3M4 83 aa2.28□□□□□ -2.05
NEDD4-208ENST00000508342 FUSP35637 526 aaKnown RBP eCLIP2.28□□□□□ -2.05
NEDD4-208ENST00000508342 NANOS2P60321 138 aaKnown RBP2.28□□□□□ -2.05
NEDD4-208ENST00000508342 IMUPQ9GZP8 106 aa2.28□□□□□ -2.05
NEDD4-208ENST00000508342 UQCR10Q9UDW1 63 aa2.28□□□□□ -2.05
NEDD4-208ENST00000508342 ARHGAP32A7KAX9 2087 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 PYY3Q5JQD4 70 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 LINC00311Q8N616 119 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 MUC7Q8TAX7 377 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 IFI27L1Q96BM0 104 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 KLK12Q9UKR0 248 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 TRAV1-1A0A0B4J248 108 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 COX7A2LO14548 114 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 MRPL53Q96EL3 112 aaKnown RBP2.27□□□□□ -2.05
NEDD4-208ENST00000508342 CEP295Q9C0D2 2601 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 TRAV8-3A0A0A6YYJ7 113 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 IZUMO1RA6ND01 250 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 SOCS3O14543 225 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 EGR2P11161 476 aaPredicted RBP2.27□□□□□ -2.05
NEDD4-208ENST00000508342 UBE2D3P61077 147 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 Q8N9W7 124 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 LAMTOR2Q9Y2Q5 125 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 CEP350Q5VT06 3117 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 IGHV4-30-4P0DP06 118 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 YPEL3P61236 119 aaPredicted RBP2.27□□□□□ -2.05
NEDD4-208ENST00000508342 Q0VG73 95 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 SIGMAR1Q99720 223 aa2.27□□□□□ -2.05
NEDD4-208ENST00000508342 RNASE7Q9H1E1 156 aaKnown RBP2.27□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms