RNA–Protein interactions for RNA: ENST00000508319.1

HMGCS1-205, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 3

Gene HMGCS1, Length 591 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-205ENST00000508319 KRBOX1C9JBD0 128 aa8.65□□□□□ -1.02
HMGCS1-205ENST00000508319 M0R036 132 aa8.65□□□□□ -1.02
HMGCS1-205ENST00000508319 ARPC5O15511 151 aa8.65□□□□□ -1.02
HMGCS1-205ENST00000508319 SH2D1AO60880 128 aa8.65□□□□□ -1.02
HMGCS1-205ENST00000508319 SMR3BP02814 79 aaPredicted RBP8.65□□□□□ -1.02
HMGCS1-205ENST00000508319 FRZBQ92765 325 aa8.65□□□□□ -1.02
HMGCS1-205ENST00000508319 ZFP30Q9Y2G7 519 aa8.65□□□□□ -1.02
HMGCS1-205ENST00000508319 RHODO00212 210 aa8.64□□□□□ -1.03
HMGCS1-205ENST00000508319 ARMS2P0C7Q2 107 aa8.64□□□□□ -1.03
HMGCS1-205ENST00000508319 INAFM2P0DMQ5 153 aa8.64□□□□□ -1.03
HMGCS1-205ENST00000508319 WFDC2Q14508 124 aa8.64□□□□□ -1.03
HMGCS1-205ENST00000508319 ZNF674Q2M3X9 581 aa8.64□□□□□ -1.03
HMGCS1-205ENST00000508319 FAM162BQ5T6X4 162 aa8.64□□□□□ -1.03
HMGCS1-205ENST00000508319 FMC1Q96HJ9 113 aa8.64□□□□□ -1.03
HMGCS1-205ENST00000508319 TCEAL7Q9BRU2 100 aa8.64□□□□□ -1.03
HMGCS1-205ENST00000508319 TMEM70Q9BUB7 260 aa8.64□□□□□ -1.03
HMGCS1-205ENST00000508319 TRBV6-1A0A0K0K1D8 114 aa8.63□□□□□ -1.03
HMGCS1-205ENST00000508319 GRIFINA4D1Z8 144 aa8.63□□□□□ -1.03
HMGCS1-205ENST00000508319 LTAP01374 205 aa8.63□□□□□ -1.03
HMGCS1-205ENST00000508319 FHITP49789 147 aa8.63□□□□□ -1.03
HMGCS1-205ENST00000508319 UBE2G1P62253 170 aa8.63□□□□□ -1.03
HMGCS1-205ENST00000508319 DAZ4Q86SG3 579 aaKnown RBP8.63□□□□□ -1.03
HMGCS1-205ENST00000508319 SYT8Q8NBV8 401 aa8.63□□□□□ -1.03
HMGCS1-205ENST00000508319 OR11H4Q8NGC9 324 aa8.63□□□□□ -1.03
HMGCS1-205ENST00000508319 DAZ3Q9NR90 486 aaKnown RBP8.63□□□□□ -1.03
HMGCS1-205ENST00000508319 A0A087WWC5 75 aa8.62□□□□□ -1.03
HMGCS1-205ENST00000508319 FAM74A4Q5TZK3 123 aa8.62□□□□□ -1.03
HMGCS1-205ENST00000508319 TM2D2Q9BX73 214 aa8.62□□□□□ -1.03
HMGCS1-205ENST00000508319 A0A087WWL8 130 aa8.61□□□□□ -1.03
HMGCS1-205ENST00000508319 TMSB15BA0A087X1C1 80 aa8.61□□□□□ -1.03
HMGCS1-205ENST00000508319 TRAV8-3A0A0A6YYJ7 113 aa8.61□□□□□ -1.03
HMGCS1-205ENST00000508319 SMLR1H3BR10 107 aa8.61□□□□□ -1.03
HMGCS1-205ENST00000508319 J3QL48 77 aa8.61□□□□□ -1.03
HMGCS1-205ENST00000508319 M0R381 172 aa8.61□□□□□ -1.03
HMGCS1-205ENST00000508319 RGS21Q2M5E4 152 aa8.61□□□□□ -1.03
HMGCS1-205ENST00000508319 CST9LP1Q5W188 147 aa8.61□□□□□ -1.03
HMGCS1-205ENST00000508319 SFRP2Q96HF1 295 aa8.61□□□□□ -1.03
HMGCS1-205ENST00000508319 FAM30AQ9NZY2 134 aa8.61□□□□□ -1.03
HMGCS1-205ENST00000508319 PHLDA3Q9Y5J5 127 aa8.61□□□□□ -1.03
HMGCS1-205ENST00000508319 TPT1P13693 172 aaKnown RBP8.6□□□□□ -1.03
HMGCS1-205ENST00000508319 AKR1C3P42330 323 aa8.6□□□□□ -1.03
HMGCS1-205ENST00000508319 ZNF345Q14585 488 aa8.6□□□□□ -1.03
HMGCS1-205ENST00000508319 TOR2AQ5JU69 321 aa8.6□□□□□ -1.03
HMGCS1-205ENST00000508319 NIT1Q86X76 327 aa8.6□□□□□ -1.03
HMGCS1-205ENST00000508319 ZFP82Q8N141 532 aa8.6□□□□□ -1.03
HMGCS1-205ENST00000508319 STOML3Q8TAV4 291 aa8.6□□□□□ -1.03
HMGCS1-205ENST00000508319 LECT2O14960 151 aa8.59□□□□□ -1.03
HMGCS1-205ENST00000508319 PAGE4O60829 102 aa8.59□□□□□ -1.03
HMGCS1-205ENST00000508319 C1QBP02746 253 aa8.59□□□□□ -1.03
HMGCS1-205ENST00000508319 Q6ZSA8 131 aa8.59□□□□□ -1.03
HMGCS1-205ENST00000508319 KCNRGQ8N5I3 272 aa8.59□□□□□ -1.03
HMGCS1-205ENST00000508319 FAM229AH3BQW9 127 aa8.58□□□□□ -1.04
HMGCS1-205ENST00000508319 LINC00528Q8N1L1 170 aa8.58□□□□□ -1.04
HMGCS1-205ENST00000508319 DNAJC30Q96LL9 226 aa8.58□□□□□ -1.04
HMGCS1-205ENST00000508319 TRBV10-1A0A0K0K1A3 114 aa8.57□□□□□ -1.04
HMGCS1-205ENST00000508319 SCO2A0A1W2PP80 73 aa8.57□□□□□ -1.04
HMGCS1-205ENST00000508319 SEC11BP0C7V7 166 aa8.57□□□□□ -1.04
HMGCS1-205ENST00000508319 UBE2D3P61077 147 aa8.57□□□□□ -1.04
HMGCS1-205ENST00000508319 UBE2D2P62837 147 aa8.57□□□□□ -1.04
HMGCS1-205ENST00000508319 RPL19P84098 196 aaKnown RBP8.57□□□□□ -1.04
HMGCS1-205ENST00000508319 MBD3L1Q8WWY6 194 aa8.57□□□□□ -1.04
HMGCS1-205ENST00000508319 MLST8Q9BVC4 326 aa8.57□□□□□ -1.04
HMGCS1-205ENST00000508319 COX11Q9Y6N1 276 aa8.57□□□□□ -1.04
HMGCS1-205ENST00000508319 URGCP-MRPS24S4R325 110 aa8.57□□□□□ -1.04
HMGCS1-205ENST00000508319 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 TRBV7-3A0A075B6L6 115 aa8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 A0A1B0GV50 99 aa8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 UMAD1C9J7I0 102 aa8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 CXCL1P09341 107 aa8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 RPL36AP83881 106 aaKnown RBP8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 OR10G8Q8NGN5 311 aa8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 OR10AG1Q8NH19 301 aa8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 FAM213BQ8TBF2 198 aa8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 SFT2D1Q8WV19 159 aa8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 BAALCQ8WXS3 180 aa8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 RPL36ALQ969Q0 106 aaKnown RBP8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 CHCHD7Q9BUK0 85 aa8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 KLK12Q9UKR0 248 aa8.56□□□□□ -1.04
HMGCS1-205ENST00000508319 HMSDA8MTL9 139 aa8.55□□□□□ -1.04
HMGCS1-205ENST00000508319 BCL2L11O43521 198 aa8.55□□□□□ -1.04
HMGCS1-205ENST00000508319 S100A9P06702 114 aaKnown RBP8.55□□□□□ -1.04
HMGCS1-205ENST00000508319 ATRAIDQ6UW56 229 aa8.55□□□□□ -1.04
HMGCS1-205ENST00000508319 RMI2Q96E14 147 aa8.55□□□□□ -1.04
HMGCS1-205ENST00000508319 IGKV2D-24A0A075B6R9 120 aa8.54□□□□□ -1.04
HMGCS1-205ENST00000508319 A0A087WX48 190 aa8.54□□□□□ -1.04
HMGCS1-205ENST00000508319 SNAI2O43623 268 aa8.54□□□□□ -1.04
HMGCS1-205ENST00000508319 PFDN1O60925 122 aa8.54□□□□□ -1.04
HMGCS1-205ENST00000508319 RAB4BP61018 213 aa8.54□□□□□ -1.04
HMGCS1-205ENST00000508319 PRR27Q6MZM9 219 aa8.54□□□□□ -1.04
HMGCS1-205ENST00000508319 BAGE2Q86Y30 109 aa8.54□□□□□ -1.04
HMGCS1-205ENST00000508319 NEXN-AS1Q8NBZ9 246 aa8.54□□□□□ -1.04
HMGCS1-205ENST00000508319 UBE2WQ96B02 151 aa8.54□□□□□ -1.04
HMGCS1-205ENST00000508319 ZNF471Q9BX82 626 aaPredicted RBP8.54□□□□□ -1.04
HMGCS1-205ENST00000508319 ZNF56Q15929 161 aa8.53□□□□□ -1.04
HMGCS1-205ENST00000508319 LINC01620Q4KN68 170 aa8.53□□□□□ -1.04
HMGCS1-205ENST00000508319 SSBP4Q9BWG4 385 aaPredicted RBP8.53□□□□□ -1.04
HMGCS1-205ENST00000508319 TRBV6-8A0A0A6YYG3 113 aa8.52□□□□□ -1.05
HMGCS1-205ENST00000508319 A0A0D9SG52 128 aa8.52□□□□□ -1.05
HMGCS1-205ENST00000508319 KANTRA0A1W2PQU2 76 aa8.52□□□□□ -1.05
HMGCS1-205ENST00000508319 OR5AL1P0C617 328 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms