RNA–Protein interactions for RNA: ENST00000508258.1

SMN2-208, Transcript of survival of motor neuron 2, centromeric, humanhuman

TSL 5

Gene SMN2, Length 211 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-208ENST00000508258 A0A087WTM6 91 aa0.37□□□□□ -2.35
SMN2-208ENST00000508258 EFCAB10A6NFE3 127 aa0.37□□□□□ -2.35
SMN2-208ENST00000508258 GNG7O60262 68 aa0.37□□□□□ -2.35
SMN2-208ENST00000508258 CCL3L1P16619 93 aa0.37□□□□□ -2.35
SMN2-208ENST00000508258 ELOF1P60002 83 aaKnown RBP0.37□□□□□ -2.35
SMN2-208ENST00000508258 C6orf52Q5T4I8 152 aa0.37□□□□□ -2.35
SMN2-208ENST00000508258 KRTAP19-3Q7Z4W3 81 aa0.37□□□□□ -2.35
SMN2-208ENST00000508258 KCNRGQ8N5I3 272 aa0.37□□□□□ -2.35
SMN2-208ENST00000508258 C10orf82Q8WW14 230 aa0.37□□□□□ -2.35
SMN2-208ENST00000508258 TMEM242Q9NWH2 141 aa0.37□□□□□ -2.35
SMN2-208ENST00000508258 BET1LQ9NYM9 111 aa0.37□□□□□ -2.35
SMN2-208ENST00000508258 PLXNA1Q9UIW2 1896 aa0.37□□□□□ -2.35
SMN2-208ENST00000508258 CFTRP13569 1480 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 NINQ8N4C6 2090 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 NRXN2Q9P2S2 1712 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 IBTKQ9P2D0 1353 aaPredicted RBP0.36□□□□□ -2.35
SMN2-208ENST00000508258 FAM92AA1XBS5 289 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 NDUFB6O95139 128 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 IL5P05113 134 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 UBE2G1P62253 170 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 KRTAP5-10Q6L8G5 202 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 PPP1R1CQ8WVI7 109 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 SPTSSAQ969W0 71 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 DSCR8Q96T75 97 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 SNRNP25Q9BV90 132 aaKnown RBP0.36□□□□□ -2.35
SMN2-208ENST00000508258 COA4Q9NYJ1 87 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 PHIPQ8WWQ0 1821 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 SPEF2Q9C093 1822 aa0.36□□□□□ -2.35
SMN2-208ENST00000508258 ZNF518AQ6AHZ1 1483 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 FBN2P35556 2912 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 LOC285556D6RIA3 1793 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 CLPSL1A2RUU4 121 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 APODP05090 189 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 PIPP12273 146 aaPredicted RBP0.35□□□□□ -2.35
SMN2-208ENST00000508258 CBLN1P23435 193 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 UBE2D1P51668 147 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 BTG2P78543 158 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 SSBP1Q04837 148 aaKnown RBP0.35□□□□□ -2.35
SMN2-208ENST00000508258 RPL13AP3Q6NVV1 102 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 C20orf197Q8N268 126 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 COX7B2Q8TF08 81 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 FAM103A1Q9BTL3 118 aaKnown RBP0.35□□□□□ -2.35
SMN2-208ENST00000508258 PDCD10Q9BUL8 212 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 AGPAT4-IT1Q9H0P7 198 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 RPRMQ9NS64 109 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 TANC1Q9C0D5 1861 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 IFT140Q96RY7 1462 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 KDM6BO15054 1643 aa0.35□□□□□ -2.35
SMN2-208ENST00000508258 ASH1LQ9NR48 2969 aaKnown RBP0.34□□□□□ -2.35
SMN2-208ENST00000508258 QRICH2Q9H0J4 1663 aa0.34□□□□□ -2.35
SMN2-208ENST00000508258 AHNAK2Q8IVF2 5795 aa0.34□□□□□ -2.35
SMN2-208ENST00000508258 LOC100130705A0A1B0GUX0 176 aa0.34□□□□□ -2.36
SMN2-208ENST00000508258 RBAKDNA6NC62 111 aa0.34□□□□□ -2.36
SMN2-208ENST00000508258 MCRIP1C9JLW8 97 aa0.34□□□□□ -2.36
SMN2-208ENST00000508258 IFNA17P01571 189 aa0.34□□□□□ -2.36
SMN2-208ENST00000508258 HIST1H1DP16402 221 aaKnown RBP0.34□□□□□ -2.36
SMN2-208ENST00000508258 Q6AWC8 147 aa0.34□□□□□ -2.36
SMN2-208ENST00000508258 SPATA8Q6RVD6 105 aa0.34□□□□□ -2.36
SMN2-208ENST00000508258 NALCNQ8IZF0 1738 aa0.34□□□□□ -2.36
SMN2-208ENST00000508258 MED12Q93074 2177 aa0.34□□□□□ -2.36
SMN2-208ENST00000508258 LSM10Q969L4 123 aaKnown RBP0.34□□□□□ -2.36
SMN2-208ENST00000508258 SEC11CQ9BY50 192 aa0.34□□□□□ -2.36
SMN2-208ENST00000508258 RERGLQ9H628 205 aa0.34□□□□□ -2.36
SMN2-208ENST00000508258 TNS1Q9HBL0 1735 aaKnown RBP0.34□□□□□ -2.36
SMN2-208ENST00000508258 SERP1Q9Y6X1 66 aa0.34□□□□□ -2.36
SMN2-208ENST00000508258 SIPA1L3O60292 1781 aaPredicted RBP0.34□□□□□ -2.36
SMN2-208ENST00000508258 ESPL1Q14674 2120 aa0.34□□□□□ -2.36
SMN2-208ENST00000508258 CDK13Q14004 1512 aaKnown RBP0.33□□□□□ -2.36
SMN2-208ENST00000508258 ROCK2O75116 1388 aaKnown RBP0.33□□□□□ -2.36
SMN2-208ENST00000508258 NCOA3Q9Y6Q9 1424 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 TRBV10-3A0A0K0K1G6 114 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 A0A1B0GV90 55 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 FAM25AB3EWG3 89 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 FAM25CB3EWG5 89 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 FAM25GB3EWG6 89 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 SNCGO76070 127 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 FGF7P21781 194 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 CCL8P80075 99 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 MEIG1Q5JSS6 88 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 S100A7L2Q5SY68 101 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 FAM74A4Q5TZK3 123 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 RPL7L1Q6DKI1 246 aaKnown RBP0.33□□□□□ -2.36
SMN2-208ENST00000508258 ZNF818PQ6ZRF7 136 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 C4orf33Q8N1A6 199 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 Q8N8P6 123 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.33□□□□□ -2.36
SMN2-208ENST00000508258 COPS9Q8WXC6 57 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 Q96NJ1 140 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 NAA60Q9H7X0 242 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 LRRC37A3O60309 1634 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 PXDNQ92626 1479 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 ZNF469Q96JG9 3925 aaPredicted RBP0.33□□□□□ -2.36
SMN2-208ENST00000508258 NWD2Q9ULI1 1742 aa0.33□□□□□ -2.36
SMN2-208ENST00000508258 SPTBP11277 2137 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 SSC5DA1L4H1 1573 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 RBBP6Q7Z6E9 1792 aaKnown RBP0.32□□□□□ -2.36
SMN2-208ENST00000508258 MUC16Q8WXI7 14507 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 NAIPQ13075 1403 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 CASKIN1Q8WXD9 1431 aa0.32□□□□□ -2.36
SMN2-208ENST00000508258 NOTCH1P46531 2555 aa0.32□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms