RNA–Protein interactions for RNA: ENST00000508063.1

PTPN13-207, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

TSL 3

Gene PTPN13, Length 457 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-207ENST00000508063 CST9LP1Q5W188 147 aa7.44□□□□□ -1.22
PTPN13-207ENST00000508063 OR11H4Q8NGC9 324 aa7.44□□□□□ -1.22
PTPN13-207ENST00000508063 ZC2HC1AQ96GY0 325 aa7.44□□□□□ -1.22
PTPN13-207ENST00000508063 LRCOL1A6NCL2 159 aa7.43□□□□□ -1.22
PTPN13-207ENST00000508063 G3V3Q6 166 aa7.43□□□□□ -1.22
PTPN13-207ENST00000508063 H3BVH4 76 aa7.43□□□□□ -1.22
PTPN13-207ENST00000508063 M0R036 132 aa7.43□□□□□ -1.22
PTPN13-207ENST00000508063 SH2D1AO60880 128 aa7.43□□□□□ -1.22
PTPN13-207ENST00000508063 S100A9P06702 114 aaKnown RBP7.43□□□□□ -1.22
PTPN13-207ENST00000508063 ARMS2P0C7Q2 107 aa7.43□□□□□ -1.22
PTPN13-207ENST00000508063 TPT1P13693 172 aaKnown RBP7.43□□□□□ -1.22
PTPN13-207ENST00000508063 XGP55808 180 aa7.43□□□□□ -1.22
PTPN13-207ENST00000508063 KRTAP10-1P60331 282 aa7.43□□□□□ -1.22
PTPN13-207ENST00000508063 FRZBQ92765 325 aa7.43□□□□□ -1.22
PTPN13-207ENST00000508063 CYTL1Q9NRR1 136 aa7.43□□□□□ -1.22
PTPN13-207ENST00000508063 PHLDA3Q9Y5J5 127 aa7.43□□□□□ -1.22
PTPN13-207ENST00000508063 TRAV8-3A0A0A6YYJ7 113 aa7.42□□□□□ -1.22
PTPN13-207ENST00000508063 UMAD1C9J7I0 102 aa7.42□□□□□ -1.22
PTPN13-207ENST00000508063 SEC11BP0C7V7 166 aa7.42□□□□□ -1.22
PTPN13-207ENST00000508063 LINC00694P0DN24 101 aa7.42□□□□□ -1.22
PTPN13-207ENST00000508063 AKR1C3P42330 323 aa7.42□□□□□ -1.22
PTPN13-207ENST00000508063 CRIP1P50238 77 aa7.42□□□□□ -1.22
PTPN13-207ENST00000508063 ZNF345Q14585 488 aa7.42□□□□□ -1.22
PTPN13-207ENST00000508063 ZNF674Q2M3X9 581 aa7.42□□□□□ -1.22
PTPN13-207ENST00000508063 Q6ZSN1 163 aa7.42□□□□□ -1.22
PTPN13-207ENST00000508063 AKAP14Q86UN6 197 aa7.42□□□□□ -1.22
PTPN13-207ENST00000508063 Q8N814 137 aa7.42□□□□□ -1.22
PTPN13-207ENST00000508063 URGCP-MRPS24S4R325 110 aa7.42□□□□□ -1.22
PTPN13-207ENST00000508063 GRIFINA4D1Z8 144 aa7.41□□□□□ -1.22
PTPN13-207ENST00000508063 LTAP01374 205 aa7.41□□□□□ -1.22
PTPN13-207ENST00000508063 EIF5AP63241 154 aaKnown RBP7.41□□□□□ -1.22
PTPN13-207ENST00000508063 FAM74A4Q5TZK3 123 aa7.41□□□□□ -1.22
PTPN13-207ENST00000508063 UFSP1Q6NVU6 142 aa7.41□□□□□ -1.22
PTPN13-207ENST00000508063 ZFP82Q8N141 532 aa7.41□□□□□ -1.22
PTPN13-207ENST00000508063 KCNRGQ8N5I3 272 aa7.41□□□□□ -1.22
PTPN13-207ENST00000508063 SFRP2Q96HF1 295 aa7.41□□□□□ -1.22
PTPN13-207ENST00000508063 TMEM70Q9BUB7 260 aa7.41□□□□□ -1.22
PTPN13-207ENST00000508063 SAMD10Q9BYL1 202 aa7.41□□□□□ -1.22
PTPN13-207ENST00000508063 JPT2Q9H910 190 aa7.41□□□□□ -1.22
PTPN13-207ENST00000508063 COX11Q9Y6N1 276 aa7.41□□□□□ -1.22
PTPN13-207ENST00000508063 A0A0D9SG52 128 aa7.4□□□□□ -1.22
PTPN13-207ENST00000508063 KANTRA0A1W2PQU2 76 aa7.4□□□□□ -1.22
PTPN13-207ENST00000508063 M0R381 172 aa7.4□□□□□ -1.22
PTPN13-207ENST00000508063 PAGE4O60829 102 aa7.4□□□□□ -1.22
PTPN13-207ENST00000508063 C14orf178Q8N769 122 aaPredicted RBP7.4□□□□□ -1.22
PTPN13-207ENST00000508063 FAM213BQ8TBF2 198 aa7.4□□□□□ -1.22
PTPN13-207ENST00000508063 SFT2D1Q8WV19 159 aa7.4□□□□□ -1.22
PTPN13-207ENST00000508063 MBD3L1Q8WWY6 194 aa7.4□□□□□ -1.22
PTPN13-207ENST00000508063 RMI2Q96E14 147 aa7.4□□□□□ -1.22
PTPN13-207ENST00000508063 TMSB15BA0A087X1C1 80 aa7.39□□□□□ -1.23
PTPN13-207ENST00000508063 TRBV10-1A0A0K0K1A3 114 aa7.39□□□□□ -1.23
PTPN13-207ENST00000508063 HMSDA8MTL9 139 aa7.39□□□□□ -1.23
PTPN13-207ENST00000508063 RPL36AP83881 106 aaKnown RBP7.39□□□□□ -1.23
PTPN13-207ENST00000508063 KCNIP4Q6PIL6 250 aa7.39□□□□□ -1.23
PTPN13-207ENST00000508063 RPL36ALQ969Q0 106 aaKnown RBP7.39□□□□□ -1.23
PTPN13-207ENST00000508063 ZNF471Q9BX82 626 aaPredicted RBP7.39□□□□□ -1.23
PTPN13-207ENST00000508063 A0A087WWL8 130 aa7.38□□□□□ -1.23
PTPN13-207ENST00000508063 SMLR1H3BR10 107 aa7.38□□□□□ -1.23
PTPN13-207ENST00000508063 C1QBP02746 253 aa7.38□□□□□ -1.23
PTPN13-207ENST00000508063 CXCL1P09341 107 aa7.38□□□□□ -1.23
PTPN13-207ENST00000508063 INAFM2P0DMQ5 153 aa7.38□□□□□ -1.23
PTPN13-207ENST00000508063 ELOBQ15370 118 aa7.38□□□□□ -1.23
PTPN13-207ENST00000508063 Q5VSD8 79 aa7.38□□□□□ -1.23
PTPN13-207ENST00000508063 DAZ4Q86SG3 579 aaKnown RBP7.38□□□□□ -1.23
PTPN13-207ENST00000508063 CHCHD7Q9BUK0 85 aa7.38□□□□□ -1.23
PTPN13-207ENST00000508063 DAZ3Q9NR90 486 aaKnown RBP7.38□□□□□ -1.23
PTPN13-207ENST00000508063 TRBV7-3A0A075B6L6 115 aa7.37□□□□□ -1.23
PTPN13-207ENST00000508063 A0A087WX48 190 aa7.37□□□□□ -1.23
PTPN13-207ENST00000508063 BCL2L11O43521 198 aa7.37□□□□□ -1.23
PTPN13-207ENST00000508063 RAB4BP61018 213 aa7.37□□□□□ -1.23
PTPN13-207ENST00000508063 NIT1Q86X76 327 aa7.37□□□□□ -1.23
PTPN13-207ENST00000508063 BAGE2Q86Y30 109 aa7.37□□□□□ -1.23
PTPN13-207ENST00000508063 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.37□□□□□ -1.23
PTPN13-207ENST00000508063 Q9UF83 564 aa7.37□□□□□ -1.23
PTPN13-207ENST00000508063 A0A1B0GV50 99 aa7.36□□□□□ -1.23
PTPN13-207ENST00000508063 TEX46H3BTG2 121 aa7.35□□□□□ -1.23
PTPN13-207ENST00000508063 SMR3BP02814 79 aaPredicted RBP7.35□□□□□ -1.23
PTPN13-207ENST00000508063 UBE2D3P61077 147 aa7.35□□□□□ -1.23
PTPN13-207ENST00000508063 UBE2D2P62837 147 aa7.35□□□□□ -1.23
PTPN13-207ENST00000508063 ZNF56Q15929 161 aa7.35□□□□□ -1.23
PTPN13-207ENST00000508063 SPANXN1Q5VSR9 72 aa7.35□□□□□ -1.23
PTPN13-207ENST00000508063 EIF5AL1Q6IS14 154 aaKnown RBP7.35□□□□□ -1.23
PTPN13-207ENST00000508063 TMUB2Q71RG4 321 aa7.35□□□□□ -1.23
PTPN13-207ENST00000508063 MLST8Q9BVC4 326 aa7.35□□□□□ -1.23
PTPN13-207ENST00000508063 IGKV2D-24A0A075B6R9 120 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 SNAI2O43623 268 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 OR5AL1P0C617 328 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 RAB5CP51148 216 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 PKIAP61925 76 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 Q0VG73 95 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 TMEM97Q5BJF2 176 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 PRR27Q6MZM9 219 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 TCTE3Q8IZS6 198 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 Q8N976 141 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 OR10G8Q8NGN5 311 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 MANBALQ9NQG1 85 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 KLK12Q9UKR0 248 aa7.34□□□□□ -1.23
PTPN13-207ENST00000508063 TMEM262E9PQX1 116 aa7.33□□□□□ -1.24
PTPN13-207ENST00000508063 LECT2O14960 151 aa7.33□□□□□ -1.24
PTPN13-207ENST00000508063 SMIM17P0DL12 118 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms