RNA–Protein interactions for RNA: ENST00000507650.1

HOXC4-203, Transcript of homeobox C4, humanhuman

TSL 3

Gene HOXC4, Length 575 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-203ENST00000507650 UBE2G1P62253 170 aa10.71□□□□□ -0.69
HOXC4-203ENST00000507650 RPL19P84098 196 aaKnown RBP10.71□□□□□ -0.69
HOXC4-203ENST00000507650 DNAJC30Q96LL9 226 aa10.71□□□□□ -0.69
HOXC4-203ENST00000507650 AKR1C3P42330 323 aa10.7□□□□□ -0.7
HOXC4-203ENST00000507650 DAZ4Q86SG3 579 aaKnown RBP10.7□□□□□ -0.7
HOXC4-203ENST00000507650 SFT2D1Q8WV19 159 aa10.7□□□□□ -0.7
HOXC4-203ENST00000507650 SFRP2Q96HF1 295 aa10.7□□□□□ -0.7
HOXC4-203ENST00000507650 TCEAL7Q9BRU2 100 aa10.7□□□□□ -0.7
HOXC4-203ENST00000507650 MLST8Q9BVC4 326 aa10.7□□□□□ -0.7
HOXC4-203ENST00000507650 DAZ3Q9NR90 486 aaKnown RBP10.7□□□□□ -0.7
HOXC4-203ENST00000507650 HERC1Q15751 4861 aa10.7□□□□□ -0.7
HOXC4-203ENST00000507650 M0R381 172 aa10.69□□□□□ -0.7
HOXC4-203ENST00000507650 CCL20P78556 96 aa10.69□□□□□ -0.7
HOXC4-203ENST00000507650 FAM74A4Q5TZK3 123 aa10.69□□□□□ -0.7
HOXC4-203ENST00000507650 Q8N814 137 aa10.69□□□□□ -0.7
HOXC4-203ENST00000507650 ZNF471Q9BX82 626 aaPredicted RBP10.69□□□□□ -0.7
HOXC4-203ENST00000507650 MYCBP2O75592 4640 aa10.68□□□□□ -0.7
HOXC4-203ENST00000507650 GCSHP23434 173 aa10.68□□□□□ -0.7
HOXC4-203ENST00000507650 LAGE3Q14657 143 aa10.68□□□□□ -0.7
HOXC4-203ENST00000507650 STOML3Q8TAV4 291 aa10.68□□□□□ -0.7
HOXC4-203ENST00000507650 A0A0D9SG52 128 aa10.67□□□□□ -0.7
HOXC4-203ENST00000507650 UMAD1C9J7I0 102 aa10.67□□□□□ -0.7
HOXC4-203ENST00000507650 RHODO00212 210 aa10.67□□□□□ -0.7
HOXC4-203ENST00000507650 OR10AG1Q8NH19 301 aa10.67□□□□□ -0.7
HOXC4-203ENST00000507650 PHLDA3Q9Y5J5 127 aa10.67□□□□□ -0.7
HOXC4-203ENST00000507650 PSCAO43653 123 aa10.66□□□□□ -0.7
HOXC4-203ENST00000507650 TPT1P13693 172 aaKnown RBP10.66□□□□□ -0.7
HOXC4-203ENST00000507650 TMUB2Q71RG4 321 aa10.66□□□□□ -0.7
HOXC4-203ENST00000507650 SYT8Q8NBV8 401 aa10.66□□□□□ -0.7
HOXC4-203ENST00000507650 DERL1Q9BUN8 251 aa10.66□□□□□ -0.7
HOXC4-203ENST00000507650 FAM30AQ9NZY2 134 aa10.66□□□□□ -0.7
HOXC4-203ENST00000507650 SRRM2Q9UQ35 2752 aaKnown RBP10.65□□□□□ -0.7
HOXC4-203ENST00000507650 IGLV5-52A0A0A0MRZ9 124 aa10.65□□□□□ -0.7
HOXC4-203ENST00000507650 EPM2AB3EWF7 344 aa10.65□□□□□ -0.7
HOXC4-203ENST00000507650 MUC21A0A0G2JKD1 596 aa10.64□□□□□ -0.71
HOXC4-203ENST00000507650 MUC21A0A140T8X8 626 aa10.64□□□□□ -0.71
HOXC4-203ENST00000507650 KANTRA0A1W2PQU2 76 aa10.64□□□□□ -0.71
HOXC4-203ENST00000507650 LECT2O14960 151 aa10.64□□□□□ -0.71
HOXC4-203ENST00000507650 SMR3BP02814 79 aaPredicted RBP10.64□□□□□ -0.71
HOXC4-203ENST00000507650 UBE2D3P61077 147 aa10.64□□□□□ -0.71
HOXC4-203ENST00000507650 UBE2D2P62837 147 aa10.64□□□□□ -0.71
HOXC4-203ENST00000507650 Q5VSD8 79 aa10.64□□□□□ -0.71
HOXC4-203ENST00000507650 NIT1Q86X76 327 aa10.64□□□□□ -0.71
HOXC4-203ENST00000507650 ZFP82Q8N141 532 aa10.64□□□□□ -0.71
HOXC4-203ENST00000507650 SSBP4Q9BWG4 385 aaPredicted RBP10.64□□□□□ -0.71
HOXC4-203ENST00000507650 FLG2Q5D862 2391 aaPredicted RBP10.63□□□□□ -0.71
HOXC4-203ENST00000507650 SNAI2O43623 268 aa10.63□□□□□ -0.71
HOXC4-203ENST00000507650 CXCL1P09341 107 aa10.63□□□□□ -0.71
HOXC4-203ENST00000507650 H2AFB1P0C5Y9 115 aa10.63□□□□□ -0.71
HOXC4-203ENST00000507650 PRR27Q6MZM9 219 aa10.63□□□□□ -0.71
HOXC4-203ENST00000507650 BAGE2Q86Y30 109 aa10.63□□□□□ -0.71
HOXC4-203ENST00000507650 NTN5Q8WTR8 489 aaPredicted RBP10.63□□□□□ -0.71
HOXC4-203ENST00000507650 C11orf52Q96A22 123 aa10.63□□□□□ -0.71
HOXC4-203ENST00000507650 IGLV2-8P01709 118 aa10.62□□□□□ -0.71
HOXC4-203ENST00000507650 RPL35P42766 123 aaKnown RBP10.62□□□□□ -0.71
HOXC4-203ENST00000507650 A0A087WWC5 75 aa10.61□□□□□ -0.71
HOXC4-203ENST00000507650 S100A9P06702 114 aaKnown RBP10.61□□□□□ -0.71
HOXC4-203ENST00000507650 NEXN-AS1Q8NBZ9 246 aa10.61□□□□□ -0.71
HOXC4-203ENST00000507650 OR10G8Q8NGN5 311 aa10.61□□□□□ -0.71
HOXC4-203ENST00000507650 KIF25-AS1Q9Y6Z4 181 aa10.61□□□□□ -0.71
HOXC4-203ENST00000507650 TRAV1-1A0A0B4J248 108 aa10.6□□□□□ -0.71
HOXC4-203ENST00000507650 TRBV10-1A0A0K0K1A3 114 aa10.6□□□□□ -0.71
HOXC4-203ENST00000507650 PFDN1O60925 122 aa10.6□□□□□ -0.71
HOXC4-203ENST00000507650 OR5AL1P0C617 328 aa10.6□□□□□ -0.71
HOXC4-203ENST00000507650 TMEM70Q9BUB7 260 aa10.6□□□□□ -0.71
HOXC4-203ENST00000507650 GNG13Q9P2W3 67 aa10.6□□□□□ -0.71
HOXC4-203ENST00000507650 TRBV7-3A0A075B6L6 115 aa10.59□□□□□ -0.71
HOXC4-203ENST00000507650 GZMBP10144 247 aa10.59□□□□□ -0.71
HOXC4-203ENST00000507650 Q6ZSA8 131 aa10.59□□□□□ -0.71
HOXC4-203ENST00000507650 BAALCQ8WXS3 180 aa10.59□□□□□ -0.71
HOXC4-203ENST00000507650 KLK12Q9UKR0 248 aa10.59□□□□□ -0.71
HOXC4-203ENST00000507650 TRBV20OR9-2A0A075B6H5 130 aa10.58□□□□□ -0.72
HOXC4-203ENST00000507650 TRAV8-3A0A0A6YYJ7 113 aa10.58□□□□□ -0.72
HOXC4-203ENST00000507650 RAB4BP61018 213 aa10.58□□□□□ -0.72
HOXC4-203ENST00000507650 RPL36AP83881 106 aaKnown RBP10.58□□□□□ -0.72
HOXC4-203ENST00000507650 LINC01620Q4KN68 170 aa10.58□□□□□ -0.72
HOXC4-203ENST00000507650 CENPWQ5EE01 88 aa10.58□□□□□ -0.72
HOXC4-203ENST00000507650 NTM-AS1Q6ZSK4 140 aa10.58□□□□□ -0.72
HOXC4-203ENST00000507650 RPL36ALQ969Q0 106 aaKnown RBP10.58□□□□□ -0.72
HOXC4-203ENST00000507650 TM2D2Q9BX73 214 aa10.58□□□□□ -0.72
HOXC4-203ENST00000507650 RAB19A4D1S5 217 aa10.57□□□□□ -0.72
HOXC4-203ENST00000507650 C19orf71A6NCJ1 209 aa10.57□□□□□ -0.72
HOXC4-203ENST00000507650 RBFOX3A6NFN3 312 aa10.57□□□□□ -0.72
HOXC4-203ENST00000507650 IGLC6P0CF74 106 aa10.57□□□□□ -0.72
HOXC4-203ENST00000507650 INAFM2P0DMQ5 153 aa10.57□□□□□ -0.72
HOXC4-203ENST00000507650 SULT1A2P50226 295 aa10.57□□□□□ -0.72
HOXC4-203ENST00000507650 SSTP61278 116 aa10.57□□□□□ -0.72
HOXC4-203ENST00000507650 ZNF56Q15929 161 aa10.57□□□□□ -0.72
HOXC4-203ENST00000507650 MANBALQ9NQG1 85 aa10.57□□□□□ -0.72
HOXC4-203ENST00000507650 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.56□□□□□ -0.72
HOXC4-203ENST00000507650 EIF5AP63241 154 aaKnown RBP10.56□□□□□ -0.72
HOXC4-203ENST00000507650 ATRAIDQ6UW56 229 aa10.56□□□□□ -0.72
HOXC4-203ENST00000507650 TCTE3Q8IZS6 198 aa10.56□□□□□ -0.72
HOXC4-203ENST00000507650 DMBT1Q9UGM3 2413 aaPredicted RBP10.56□□□□□ -0.72
HOXC4-203ENST00000507650 TRBV6-8A0A0A6YYG3 113 aa10.55□□□□□ -0.72
HOXC4-203ENST00000507650 MPV17L2Q567V2 206 aa10.55□□□□□ -0.72
HOXC4-203ENST00000507650 ENHOQ6UWT2 76 aa10.55□□□□□ -0.72
HOXC4-203ENST00000507650 FRZBQ92765 325 aa10.55□□□□□ -0.72
HOXC4-203ENST00000507650 UBE2WQ96B02 151 aa10.55□□□□□ -0.72
HOXC4-203ENST00000507650 TOR2AQ5JU69 321 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 133 ms