RNA–Protein interactions for RNA: ENST00000507247.5

RNF4-208, Transcript of ring finger protein 4, humanhuman

TSL 1 (best)

Gene RNF4, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-208ENST00000507247 A0A087WWL8 130 aa10.03□□□□□ -0.8
RNF4-208ENST00000507247 TGIF2-C20orf24A0A0A6YYL0 155 aa10.03□□□□□ -0.8
RNF4-208ENST00000507247 A8MWV9 139 aa10.03□□□□□ -0.8
RNF4-208ENST00000507247 CRYGDP07320 174 aa10.03□□□□□ -0.8
RNF4-208ENST00000507247 EVI2AP22794 236 aa10.03□□□□□ -0.8
RNF4-208ENST00000507247 UFSP1Q6NVU6 142 aa10.03□□□□□ -0.8
RNF4-208ENST00000507247 Q6ZTC4 211 aa10.03□□□□□ -0.8
RNF4-208ENST00000507247 ATP5L2Q7Z4Y8 100 aa10.03□□□□□ -0.8
RNF4-208ENST00000507247 C14orf178Q8N769 122 aaPredicted RBP10.03□□□□□ -0.8
RNF4-208ENST00000507247 OR4C5Q8NGB2 326 aa10.03□□□□□ -0.8
RNF4-208ENST00000507247 AP1S3Q96PC3 154 aa10.03□□□□□ -0.8
RNF4-208ENST00000507247 KIF25-AS1Q9Y6Z4 181 aa10.03□□□□□ -0.8
RNF4-208ENST00000507247 COL7A1Q02388 2944 aa10.03□□□□□ -0.8
RNF4-208ENST00000507247 IGHV3-73A0A0B4J1V6 119 aa10.02□□□□□ -0.81
RNF4-208ENST00000507247 TRGC1P0CF51 173 aa10.02□□□□□ -0.81
RNF4-208ENST00000507247 CAMPP49913 170 aa10.02□□□□□ -0.81
RNF4-208ENST00000507247 HBBP68871 147 aa10.02□□□□□ -0.81
RNF4-208ENST00000507247 FAM74A4Q5TZK3 123 aa10.02□□□□□ -0.81
RNF4-208ENST00000507247 LINC00315P59091 139 aa10.01□□□□□ -0.81
RNF4-208ENST00000507247 GATD1Q8NB37 220 aa10.01□□□□□ -0.81
RNF4-208ENST00000507247 TRBV24-1A0A075B6N3 115 aa10□□□□□ -0.81
RNF4-208ENST00000507247 A0A1B0GW15 77 aa10□□□□□ -0.81
RNF4-208ENST00000507247 ATP5G1P05496 136 aa10□□□□□ -0.81
RNF4-208ENST00000507247 HTN3P15516 51 aa10□□□□□ -0.81
RNF4-208ENST00000507247 HOXA5P20719 270 aa10□□□□□ -0.81
RNF4-208ENST00000507247 FHL2Q14192 279 aa10□□□□□ -0.81
RNF4-208ENST00000507247 TMEM191AQ9H0A3 160 aa10□□□□□ -0.81
RNF4-208ENST00000507247 DPH3P1Q9H4G8 78 aa10□□□□□ -0.81
RNF4-208ENST00000507247 RHODO00212 210 aa9.99□□□□□ -0.81
RNF4-208ENST00000507247 MGPP08493 103 aa9.99□□□□□ -0.81
RNF4-208ENST00000507247 SMIM17P0DL12 118 aa9.99□□□□□ -0.81
RNF4-208ENST00000507247 ZFP2Q6ZN57 461 aa9.99□□□□□ -0.81
RNF4-208ENST00000507247 Q6ZSN1 163 aa9.99□□□□□ -0.81
RNF4-208ENST00000507247 AMN1Q8IY45 258 aa9.99□□□□□ -0.81
RNF4-208ENST00000507247 RNF185Q96GF1 192 aa9.99□□□□□ -0.81
RNF4-208ENST00000507247 S100A8P05109 93 aa9.98□□□□□ -0.81
RNF4-208ENST00000507247 RASL11AQ6T310 242 aa9.98□□□□□ -0.81
RNF4-208ENST00000507247 TMEM136Q6ZRR5 245 aa9.98□□□□□ -0.81
RNF4-208ENST00000507247 SMIM15Q7Z3B0 74 aa9.98□□□□□ -0.81
RNF4-208ENST00000507247 TRGV4A0A0C4DH28 118 aa9.97□□□□□ -0.81
RNF4-208ENST00000507247 F5H768 121 aa9.97□□□□□ -0.81
RNF4-208ENST00000507247 GATA1P15976 413 aaPredicted RBP9.97□□□□□ -0.81
RNF4-208ENST00000507247 ZNF56Q15929 161 aa9.97□□□□□ -0.81
RNF4-208ENST00000507247 FAM104BQ5XKR9 115 aa9.97□□□□□ -0.81
RNF4-208ENST00000507247 FAM210BQ96KR6 192 aa9.97□□□□□ -0.81
RNF4-208ENST00000507247 DEFB131BA0A096LNP1 70 aa9.96□□□□□ -0.82
RNF4-208ENST00000507247 TRAV10A0A0B4J240 114 aa9.96□□□□□ -0.82
RNF4-208ENST00000507247 COLCA2A8K830 154 aa9.96□□□□□ -0.82
RNF4-208ENST00000507247 CIDEAO60543 219 aa9.96□□□□□ -0.82
RNF4-208ENST00000507247 RAB4AP20338 218 aa9.96□□□□□ -0.82
RNF4-208ENST00000507247 RAB4BP61018 213 aa9.96□□□□□ -0.82
RNF4-208ENST00000507247 TRAV26-2A0A0B4J265 109 aa9.95□□□□□ -0.82
RNF4-208ENST00000507247 F5H697 171 aa9.95□□□□□ -0.82
RNF4-208ENST00000507247 GAS8-AS1O95177 125 aa9.95□□□□□ -0.82
RNF4-208ENST00000507247 SLAQ13239 276 aa9.95□□□□□ -0.82
RNF4-208ENST00000507247 MRPL51Q4U2R6 128 aaKnown RBP9.95□□□□□ -0.82
RNF4-208ENST00000507247 SUMO4Q6EEV6 95 aa9.95□□□□□ -0.82
RNF4-208ENST00000507247 SLC25A29Q8N8R3 303 aa9.95□□□□□ -0.82
RNF4-208ENST00000507247 PHLDA1Q8WV24 401 aaPredicted RBP9.95□□□□□ -0.82
RNF4-208ENST00000507247 GNB1LQ9BYB4 327 aa9.95□□□□□ -0.82
RNF4-208ENST00000507247 HLA-DQA1P01909 254 aa9.94□□□□□ -0.82
RNF4-208ENST00000507247 P0DMU3 169 aa9.94□□□□□ -0.82
RNF4-208ENST00000507247 FAM231AP0DMU4 169 aa9.94□□□□□ -0.82
RNF4-208ENST00000507247 FAM231CP0DMU5 169 aa9.94□□□□□ -0.82
RNF4-208ENST00000507247 CRYBA4P53673 196 aa9.94□□□□□ -0.82
RNF4-208ENST00000507247 COX19Q49B96 90 aa9.94□□□□□ -0.82
RNF4-208ENST00000507247 Q9UF83 564 aa9.94□□□□□ -0.82
RNF4-208ENST00000507247 PRO0255Q9UI72 69 aa9.94□□□□□ -0.82
RNF4-208ENST00000507247 HHLA3Q9XRX5 114 aa9.94□□□□□ -0.82
RNF4-208ENST00000507247 TRAV26-1A0A087WT03 109 aa9.93□□□□□ -0.82
RNF4-208ENST00000507247 A0A0J9YY99 117 aa9.93□□□□□ -0.82
RNF4-208ENST00000507247 LOC100131303A0A0U1RQF7 123 aa9.93□□□□□ -0.82
RNF4-208ENST00000507247 TRBV6-4A0A1B0GX49 114 aa9.93□□□□□ -0.82
RNF4-208ENST00000507247 SMKR1H3BMG3 65 aa9.93□□□□□ -0.82
RNF4-208ENST00000507247 K7EQD1 137 aa9.93□□□□□ -0.82
RNF4-208ENST00000507247 M0QY20 66 aa9.93□□□□□ -0.82
RNF4-208ENST00000507247 NCR2O95944 276 aa9.93□□□□□ -0.82
RNF4-208ENST00000507247 VSIG2Q96IQ7 327 aa9.93□□□□□ -0.82
RNF4-208ENST00000507247 MRPL18Q9H0U6 180 aaKnown RBP9.92□□□□□ -0.82
RNF4-208ENST00000507247 STAB2Q8WWQ8 2551 aa9.91□□□□□ -0.82
RNF4-208ENST00000507247 KMT2CQ8NEZ4 4911 aaKnown RBP9.91□□□□□ -0.82
RNF4-208ENST00000507247 PAX4O43316 350 aa9.91□□□□□ -0.82
RNF4-208ENST00000507247 MT-ND6P03923 174 aa9.91□□□□□ -0.82
RNF4-208ENST00000507247 RPS10P46783 165 aaKnown RBP9.91□□□□□ -0.82
RNF4-208ENST00000507247 RHOHQ15669 191 aa9.91□□□□□ -0.82
RNF4-208ENST00000507247 KIAA1644Q3SXP7 199 aa9.91□□□□□ -0.82
RNF4-208ENST00000507247 NEXN-AS1Q8NBZ9 246 aa9.91□□□□□ -0.82
RNF4-208ENST00000507247 RPL39LQ96EH5 51 aaKnown RBP9.91□□□□□ -0.82
RNF4-208ENST00000507247 MRAP2Q96G30 205 aa9.91□□□□□ -0.82
RNF4-208ENST00000507247 WWC2-AS2Q96NR7 200 aa9.91□□□□□ -0.82
RNF4-208ENST00000507247 TRAPPC1Q9Y5R8 145 aa9.91□□□□□ -0.82
RNF4-208ENST00000507247 D6R8Y8 96 aa9.9□□□□□ -0.82
RNF4-208ENST00000507247 APCSP02743 223 aa9.9□□□□□ -0.82
RNF4-208ENST00000507247 RAB5AP20339 215 aa9.9□□□□□ -0.82
RNF4-208ENST00000507247 FRZBQ92765 325 aa9.9□□□□□ -0.82
RNF4-208ENST00000507247 H7C1H1 209 aa9.89□□□□□ -0.83
RNF4-208ENST00000507247 GYPEP15421 78 aa9.89□□□□□ -0.83
RNF4-208ENST00000507247 CKS2P33552 79 aa9.89□□□□□ -0.83
RNF4-208ENST00000507247 FABP9Q0Z7S8 132 aa9.89□□□□□ -0.83
RNF4-208ENST00000507247 CEMP1Q6PRD7 247 aaPredicted RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms