RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 XGP55808 180 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 DMRTA1Q5VZB9 504 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 UFSP1Q6NVU6 142 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 KCNRGQ8N5I3 272 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 Q8N814 137 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 SFRP2Q96HF1 295 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 CHCHD7Q9BUK0 85 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 Q9HAA7 133 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 URGCP-MRPS24S4R325 110 aa9.66□□□□□ -0.86
HMGCS1-203ENST00000507004 HMSDA8MTL9 139 aa9.65□□□□□ -0.86
HMGCS1-203ENST00000507004 M0R036 132 aa9.65□□□□□ -0.86
HMGCS1-203ENST00000507004 CRIP1P50238 77 aa9.65□□□□□ -0.86
HMGCS1-203ENST00000507004 KRTAP10-1P60331 282 aa9.65□□□□□ -0.86
HMGCS1-203ENST00000507004 ELOBQ15370 118 aa9.65□□□□□ -0.86
HMGCS1-203ENST00000507004 KCNIP4Q6PIL6 250 aa9.65□□□□□ -0.86
HMGCS1-203ENST00000507004 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.65□□□□□ -0.86
HMGCS1-203ENST00000507004 MBD3L1Q8WWY6 194 aa9.65□□□□□ -0.86
HMGCS1-203ENST00000507004 KANTRA0A1W2PQU2 76 aa9.64□□□□□ -0.87
HMGCS1-203ENST00000507004 RPL36AP83881 106 aaKnown RBP9.64□□□□□ -0.87
HMGCS1-203ENST00000507004 Q6ZSN1 163 aa9.64□□□□□ -0.87
HMGCS1-203ENST00000507004 RPL36ALQ969Q0 106 aaKnown RBP9.64□□□□□ -0.87
HMGCS1-203ENST00000507004 PAGE4O60829 102 aa9.63□□□□□ -0.87
HMGCS1-203ENST00000507004 FAM74A4Q5TZK3 123 aa9.63□□□□□ -0.87
HMGCS1-203ENST00000507004 SFT2D1Q8WV19 159 aa9.63□□□□□ -0.87
HMGCS1-203ENST00000507004 SAMD10Q9BYL1 202 aa9.63□□□□□ -0.87
HMGCS1-203ENST00000507004 GRIFINA4D1Z8 144 aa9.62□□□□□ -0.87
HMGCS1-203ENST00000507004 FAM229AH3BQW9 127 aa9.62□□□□□ -0.87
HMGCS1-203ENST00000507004 M0R381 172 aa9.62□□□□□ -0.87
HMGCS1-203ENST00000507004 PKIAP61925 76 aa9.62□□□□□ -0.87
HMGCS1-203ENST00000507004 C14orf178Q8N769 122 aaPredicted RBP9.62□□□□□ -0.87
HMGCS1-203ENST00000507004 FAM213BQ8TBF2 198 aa9.62□□□□□ -0.87
HMGCS1-203ENST00000507004 ZNF471Q9BX82 626 aaPredicted RBP9.62□□□□□ -0.87
HMGCS1-203ENST00000507004 JPT2Q9H910 190 aa9.62□□□□□ -0.87
HMGCS1-203ENST00000507004 TRBV7-3A0A075B6L6 115 aa9.61□□□□□ -0.87
HMGCS1-203ENST00000507004 BCL2L11O43521 198 aa9.61□□□□□ -0.87
HMGCS1-203ENST00000507004 INAFM2P0DMQ5 153 aa9.61□□□□□ -0.87
HMGCS1-203ENST00000507004 FUSP35637 526 aaKnown RBP eCLIP9.61□□□□□ -0.87
HMGCS1-203ENST00000507004 Q5VSD8 79 aa9.61□□□□□ -0.87
HMGCS1-203ENST00000507004 EIF5AL1Q6IS14 154 aaKnown RBP9.61□□□□□ -0.87
HMGCS1-203ENST00000507004 A0A087WX48 190 aa9.6□□□□□ -0.87
HMGCS1-203ENST00000507004 TMSB15BA0A087X1C1 80 aa9.6□□□□□ -0.87
HMGCS1-203ENST00000507004 TEX46H3BTG2 121 aa9.6□□□□□ -0.87
HMGCS1-203ENST00000507004 H2AFB1P0C5Y9 115 aa9.6□□□□□ -0.87
HMGCS1-203ENST00000507004 RAB4BP61018 213 aa9.6□□□□□ -0.87
HMGCS1-203ENST00000507004 TMEM97Q5BJF2 176 aa9.6□□□□□ -0.87
HMGCS1-203ENST00000507004 NIT1Q86X76 327 aa9.6□□□□□ -0.87
HMGCS1-203ENST00000507004 BAGE2Q86Y30 109 aa9.6□□□□□ -0.87
HMGCS1-203ENST00000507004 OR10G8Q8NGN5 311 aa9.6□□□□□ -0.87
HMGCS1-203ENST00000507004 A0A087WWL8 130 aa9.59□□□□□ -0.87
HMGCS1-203ENST00000507004 RAB5CP51148 216 aa9.59□□□□□ -0.87
HMGCS1-203ENST00000507004 Q0VG73 95 aa9.59□□□□□ -0.87
HMGCS1-203ENST00000507004 DAZ4Q86SG3 579 aaKnown RBP9.59□□□□□ -0.87
HMGCS1-203ENST00000507004 MLST8Q9BVC4 326 aa9.59□□□□□ -0.87
HMGCS1-203ENST00000507004 MANBALQ9NQG1 85 aa9.59□□□□□ -0.87
HMGCS1-203ENST00000507004 DAZ3Q9NR90 486 aaKnown RBP9.59□□□□□ -0.87
HMGCS1-203ENST00000507004 SNAI2O43623 268 aa9.58□□□□□ -0.88
HMGCS1-203ENST00000507004 OR5AL1P0C617 328 aa9.58□□□□□ -0.88
HMGCS1-203ENST00000507004 UBE2D3P61077 147 aa9.58□□□□□ -0.88
HMGCS1-203ENST00000507004 UBE2D2P62837 147 aa9.58□□□□□ -0.88
HMGCS1-203ENST00000507004 Q8N976 141 aa9.58□□□□□ -0.88
HMGCS1-203ENST00000507004 SSBP4Q9BWG4 385 aaPredicted RBP9.58□□□□□ -0.88
HMGCS1-203ENST00000507004 SCO2A0A1W2PP80 73 aa9.57□□□□□ -0.88
HMGCS1-203ENST00000507004 SMLR1H3BR10 107 aa9.57□□□□□ -0.88
HMGCS1-203ENST00000507004 SPANXN1Q5VSR9 72 aa9.57□□□□□ -0.88
HMGCS1-203ENST00000507004 TRAV1-1A0A0B4J248 108 aa9.56□□□□□ -0.88
HMGCS1-203ENST00000507004 RBFOX3A6NFN3 312 aa9.56□□□□□ -0.88
HMGCS1-203ENST00000507004 SMIM17P0DL12 118 aa9.56□□□□□ -0.88
HMGCS1-203ENST00000507004 ZNF56Q15929 161 aa9.56□□□□□ -0.88
HMGCS1-203ENST00000507004 C14orf177Q52M58 125 aa9.56□□□□□ -0.88
HMGCS1-203ENST00000507004 TMUB2Q71RG4 321 aa9.56□□□□□ -0.88
HMGCS1-203ENST00000507004 SMIM12Q96EX1 92 aa9.56□□□□□ -0.88
HMGCS1-203ENST00000507004 IGKV2D-24A0A075B6R9 120 aa9.55□□□□□ -0.88
HMGCS1-203ENST00000507004 TRBV6-8A0A0A6YYG3 113 aa9.55□□□□□ -0.88
HMGCS1-203ENST00000507004 RPS20P60866 119 aaKnown RBP9.55□□□□□ -0.88
HMGCS1-203ENST00000507004 PRR27Q6MZM9 219 aa9.55□□□□□ -0.88
HMGCS1-203ENST00000507004 ATRAIDQ6UW56 229 aa9.55□□□□□ -0.88
HMGCS1-203ENST00000507004 C11orf52Q96A22 123 aa9.55□□□□□ -0.88
HMGCS1-203ENST00000507004 AP1S3Q96PC3 154 aa9.55□□□□□ -0.88
HMGCS1-203ENST00000507004 BIN3Q9NQY0 253 aa9.55□□□□□ -0.88
HMGCS1-203ENST00000507004 Q9UF83 564 aa9.55□□□□□ -0.88
HMGCS1-203ENST00000507004 KLK12Q9UKR0 248 aa9.55□□□□□ -0.88
HMGCS1-203ENST00000507004 XKRY2A2RUG3 117 aa9.54□□□□□ -0.88
HMGCS1-203ENST00000507004 CRPP02741 224 aa9.54□□□□□ -0.88
HMGCS1-203ENST00000507004 OR10AG1Q8NH19 301 aa9.54□□□□□ -0.88
HMGCS1-203ENST00000507004 UBE2WQ96B02 151 aa9.54□□□□□ -0.88
HMGCS1-203ENST00000507004 DAZAP1Q96EP5 407 aaKnown RBP9.54□□□□□ -0.88
HMGCS1-203ENST00000507004 A0A1B0GV50 99 aa9.53□□□□□ -0.88
HMGCS1-203ENST00000507004 TMEM262E9PQX1 116 aa9.53□□□□□ -0.88
HMGCS1-203ENST00000507004 H7C1H1 209 aa9.53□□□□□ -0.88
HMGCS1-203ENST00000507004 IFNA1P01562 189 aa9.53□□□□□ -0.88
HMGCS1-203ENST00000507004 RPL35P42766 123 aaKnown RBP9.53□□□□□ -0.88
HMGCS1-203ENST00000507004 Q6ZSA8 131 aa9.53□□□□□ -0.88
HMGCS1-203ENST00000507004 Q8N3U1 123 aa9.53□□□□□ -0.88
HMGCS1-203ENST00000507004 C1orf43Q9BWL3 253 aa9.53□□□□□ -0.88
HMGCS1-203ENST00000507004 F5H697 171 aa9.52□□□□□ -0.89
HMGCS1-203ENST00000507004 SMR3BP02814 79 aaPredicted RBP9.52□□□□□ -0.89
HMGCS1-203ENST00000507004 PLA2G1BP04054 148 aaKnown RBP9.52□□□□□ -0.89
HMGCS1-203ENST00000507004 TAGLN2P37802 199 aaKnown RBP9.52□□□□□ -0.89
HMGCS1-203ENST00000507004 CACNG7P62955 275 aa9.52□□□□□ -0.89
HMGCS1-203ENST00000507004 RPL19P84098 196 aaKnown RBP9.52□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms