RNA–Protein interactions for RNA: ENST00000506779.1

TOPBP1-205, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 536 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-205ENST00000506779 EXOC3-AS1Q8N2X6 119 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF738Q8NE65 137 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 OR9G4Q8NGQ1 327 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 OR1N2Q8NGR9 330 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 MYOZ3Q8TDC0 251 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 TSKUQ8WUA8 353 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 IGF2BP2-AS1Q96M15 143 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 DERL1Q9BUN8 251 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 RHPN1-AS1Q9BWJ2 59 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 GNB1LQ9BYB4 327 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 RPP21Q9H633 154 aaKnown RBP1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 ZNF492Q9P255 531 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 SMPXQ9UHP9 88 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 LINC00527Q9UJ94 153 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 RPH3ALQ9UNE2 315 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 PSG8Q9UQ74 426 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 TSSC4Q9Y5U2 329 aaPredicted RBP1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 URGCP-MRPS24S4R325 110 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 USP9YO00507 2555 aaPredicted RBP1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 STAB1Q9NY15 2570 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 DSCAMO60469 2012 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 ZFHX3Q15911 3703 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 PRRC2CQ9Y520 2896 aaKnown RBP1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 RELNP78509 3460 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 ANKHD1Q8IWZ3 2542 aaKnown RBP1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 FBN2P35556 2912 aa1.6□□□□□ -2.15
TOPBP1-205ENST00000506779 TGIF2-C20orf24A0A0A6YYL0 155 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 TRAV21A0A0B4J279 112 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 IGHV3-66A0A0C4DH42 116 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 A0A1B0GUT8 65 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 SMIM27A0A1W2PRY6 76 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 CLPSL1A2RUU4 121 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 TMEM189A5PLL7 270 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 C19orf71A6NCJ1 209 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 IZUMO1RA6ND01 250 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 OR4C46A6NHA9 309 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 C2orf70A6NJV1 201 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 HIGD1CA8MV81 97 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 EIF3GO75821 320 aaKnown RBP eCLIP1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 IGLV2-8P01709 118 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 HLA-DQA1P01909 254 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 APCSP02743 223 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 GPX1P07203 203 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 CHTF8P0CG12 524 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 S100A2P29034 98 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 INSL3P51460 131 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 SYNJ2BPP57105 145 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 NUTF2P61970 127 aaKnown RBP1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 HIST1H1AQ02539 215 aaPredicted RBP1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 OR5I1Q13606 314 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 UNQ9165/PRO28630Q6UXU0 137 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 TCF24Q7RTU0 167 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 Q86TA4 180 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 Q8N9L7 120 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 OR11H1Q8NG94 326 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 OR2D3Q8NGH3 330 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 OR2K2Q8NGT1 345 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 DYNLRB2Q8TF09 96 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 FRZBQ92765 325 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 KCNS1Q96KK3 526 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 YPEL4Q96NS1 127 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 ODF3Q96PU9 254 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 RNASE7Q9H1E1 156 aaKnown RBP1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 MS4A6AQ9H2W1 248 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 ZMAT5Q9UDW3 170 aaKnown RBP1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 TRAPPC1Q9Y5R8 145 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 V9GYV3 84 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 NOTCH1P46531 2555 aa1.59□□□□□ -2.15
TOPBP1-205ENST00000506779 CACNA1DQ01668 2161 aa1.59□□□□□ -2.16
TOPBP1-205ENST00000506779 ARFGEF3Q5TH69 2177 aa1.59□□□□□ -2.16
TOPBP1-205ENST00000506779 ABCA2Q9BZC7 2435 aa1.59□□□□□ -2.16
TOPBP1-205ENST00000506779 CADP27708 2225 aa1.59□□□□□ -2.16
TOPBP1-205ENST00000506779 NIPBLQ6KC79 2804 aaeCLIP1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 SPTBN1Q01082 2364 aaKnown RBP1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 PRR14LQ5THK1 2151 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 MALRD1Q5VYJ5 2156 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 COL6A6A6NMZ7 2263 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 IGHV3OR16-8A0A075B7F1 116 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 IGHV3-49A0A0A0MS15 119 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 TRAV8-1A0A0A6YYK1 113 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 TMEM213A2RRL7 107 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 K7EN84 100 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 M0R3E3 92 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 SLC17A3O00476 420 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 ZNF207O43670 478 aaKnown RBP1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 PPP1R17O96001 155 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 TRBV12-3P01733 135 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 ORM1P02763 201 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 PPBPP02775 128 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 TRGC2P03986 189 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 CXCL1P09341 107 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 CRISP2P16562 243 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 RAB4AP20338 218 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 S100A4P26447 101 aaKnown RBP1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 G0S2P27469 103 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 AKR1D1P51857 326 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 NDUFA6P56556 154 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 KRTAP10-10P60014 251 aa1.58□□□□□ -2.16
TOPBP1-205ENST00000506779 RAB4BP61018 213 aa1.58□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms