RNA–Protein interactions for RNA: ENST00000506632.2

PDLIM5-209, Transcript of PDZ and LIM domain 5, humanhuman

TSL 3

Gene PDLIM5, Length 907 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-209ENST00000506632 LELP1Q5T871 98 aa6.11□□□□□ -1.43
PDLIM5-209ENST00000506632 FAM213BQ8TBF2 198 aa6.11□□□□□ -1.43
PDLIM5-209ENST00000506632 SFT2D1Q8WV19 159 aa6.11□□□□□ -1.43
PDLIM5-209ENST00000506632 SAMD10Q9BYL1 202 aa6.11□□□□□ -1.43
PDLIM5-209ENST00000506632 GTSF1LQ9H1H1 148 aa6.11□□□□□ -1.43
PDLIM5-209ENST00000506632 JPT2Q9H910 190 aa6.11□□□□□ -1.43
PDLIM5-209ENST00000506632 ABCA13Q86UQ4 5058 aa6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 A0A087WTM6 91 aa6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 KANTRA0A1W2PQU2 76 aa6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 IBA57-AS1B1ANH7 110 aa6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 M0R036 132 aa6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 S100A9P06702 114 aaKnown RBP6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 ARMS2P0C7Q2 107 aa6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 EIF5AP63241 154 aaKnown RBP6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 LGALSLQ3ZCW2 172 aaPredicted RBP6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 TMUB2Q71RG4 321 aa6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 ATP6V0E2Q8NHE4 81 aa6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 MLST8Q9BVC4 326 aa6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 Q9UF83 564 aa6.1□□□□□ -1.43
PDLIM5-209ENST00000506632 TRAV8-6A0A0B4J262 113 aa6.09□□□□□ -1.43
PDLIM5-209ENST00000506632 SCO2A0A1W2PP80 73 aa6.09□□□□□ -1.43
PDLIM5-209ENST00000506632 GRIFINA4D1Z8 144 aa6.09□□□□□ -1.43
PDLIM5-209ENST00000506632 RHODO00212 210 aa6.09□□□□□ -1.43
PDLIM5-209ENST00000506632 H2AFB1P0C5Y9 115 aa6.09□□□□□ -1.43
PDLIM5-209ENST00000506632 OR10J3Q5JRS4 329 aa6.09□□□□□ -1.43
PDLIM5-209ENST00000506632 C14orf178Q8N769 122 aaPredicted RBP6.09□□□□□ -1.43
PDLIM5-209ENST00000506632 SYT8Q8NBV8 401 aa6.09□□□□□ -1.43
PDLIM5-209ENST00000506632 SFRP2Q96HF1 295 aa6.09□□□□□ -1.43
PDLIM5-209ENST00000506632 TRAV1-1A0A0B4J248 108 aa6.08□□□□□ -1.44
PDLIM5-209ENST00000506632 A0A1B0GV50 99 aa6.08□□□□□ -1.44
PDLIM5-209ENST00000506632 GAGE12JA6NER3 117 aa6.08□□□□□ -1.44
PDLIM5-209ENST00000506632 CXCL1P09341 107 aa6.08□□□□□ -1.44
PDLIM5-209ENST00000506632 TPT1P13693 172 aaKnown RBP6.08□□□□□ -1.44
PDLIM5-209ENST00000506632 GAGE1Q13065 139 aa6.08□□□□□ -1.44
PDLIM5-209ENST00000506632 GAGE4Q13068 117 aa6.08□□□□□ -1.44
PDLIM5-209ENST00000506632 GAGE5Q13069 117 aa6.08□□□□□ -1.44
PDLIM5-209ENST00000506632 GAGE13Q4V321 117 aa6.08□□□□□ -1.44
PDLIM5-209ENST00000506632 Q8N1X5 172 aa6.08□□□□□ -1.44
PDLIM5-209ENST00000506632 MAPKAPK5-AS1Q8N8E1 139 aa6.08□□□□□ -1.44
PDLIM5-209ENST00000506632 PHLDA3Q9Y5J5 127 aa6.08□□□□□ -1.44
PDLIM5-209ENST00000506632 TMSB15BA0A087X1C1 80 aa6.07□□□□□ -1.44
PDLIM5-209ENST00000506632 LRCOL1A6NCL2 159 aa6.07□□□□□ -1.44
PDLIM5-209ENST00000506632 M0R381 172 aa6.07□□□□□ -1.44
PDLIM5-209ENST00000506632 PFDN1O60925 122 aa6.07□□□□□ -1.44
PDLIM5-209ENST00000506632 FUSP35637 526 aaKnown RBP eCLIP6.07□□□□□ -1.44
PDLIM5-209ENST00000506632 CCL20P78556 96 aa6.07□□□□□ -1.44
PDLIM5-209ENST00000506632 LAGE3Q14657 143 aa6.07□□□□□ -1.44
PDLIM5-209ENST00000506632 BAGE2Q86Y30 109 aa6.07□□□□□ -1.44
PDLIM5-209ENST00000506632 TCTE3Q8IZS6 198 aa6.07□□□□□ -1.44
PDLIM5-209ENST00000506632 ZFP82Q8N141 532 aa6.07□□□□□ -1.44
PDLIM5-209ENST00000506632 C11orf52Q96A22 123 aa6.07□□□□□ -1.44
PDLIM5-209ENST00000506632 A0A087WWL8 130 aa6.06□□□□□ -1.44
PDLIM5-209ENST00000506632 SNAI2O43623 268 aa6.06□□□□□ -1.44
PDLIM5-209ENST00000506632 IGHV3-30P01768 117 aa6.06□□□□□ -1.44
PDLIM5-209ENST00000506632 IGHV3-33P01772 117 aa6.06□□□□□ -1.44
PDLIM5-209ENST00000506632 IGHV3-30-3P0DP02 117 aa6.06□□□□□ -1.44
PDLIM5-209ENST00000506632 IGHV3-30-5P0DP03 117 aa6.06□□□□□ -1.44
PDLIM5-209ENST00000506632 RAB5CP51148 216 aa6.06□□□□□ -1.44
PDLIM5-209ENST00000506632 RPL19P84098 196 aaKnown RBP6.06□□□□□ -1.44
PDLIM5-209ENST00000506632 FAM74A4Q5TZK3 123 aa6.06□□□□□ -1.44
PDLIM5-209ENST00000506632 Q8N3U1 123 aa6.06□□□□□ -1.44
PDLIM5-209ENST00000506632 MANBALQ9NQG1 85 aa6.06□□□□□ -1.44
PDLIM5-209ENST00000506632 A0A087WWC5 75 aa6.05□□□□□ -1.44
PDLIM5-209ENST00000506632 TRBV10-1A0A0K0K1A3 114 aa6.05□□□□□ -1.44
PDLIM5-209ENST00000506632 IGLV2-8P01709 118 aa6.05□□□□□ -1.44
PDLIM5-209ENST00000506632 OR5AL1P0C617 328 aa6.05□□□□□ -1.44
PDLIM5-209ENST00000506632 RPL35P42766 123 aaKnown RBP6.05□□□□□ -1.44
PDLIM5-209ENST00000506632 SULT1A2P50226 295 aa6.05□□□□□ -1.44
PDLIM5-209ENST00000506632 XGP55808 180 aa6.05□□□□□ -1.44
PDLIM5-209ENST00000506632 KRTAP10-1P60331 282 aa6.05□□□□□ -1.44
PDLIM5-209ENST00000506632 OR10G8Q8NGN5 311 aa6.05□□□□□ -1.44
PDLIM5-209ENST00000506632 OR10AG1Q8NH19 301 aa6.05□□□□□ -1.44
PDLIM5-209ENST00000506632 DERL1Q9BUN8 251 aa6.05□□□□□ -1.44
PDLIM5-209ENST00000506632 GNG13Q9P2W3 67 aa6.05□□□□□ -1.44
PDLIM5-209ENST00000506632 C1QBP02746 253 aa6.04□□□□□ -1.44
PDLIM5-209ENST00000506632 UBE2D3P61077 147 aa6.04□□□□□ -1.44
PDLIM5-209ENST00000506632 UBE2D2P62837 147 aa6.04□□□□□ -1.44
PDLIM5-209ENST00000506632 EIF5AL1Q6IS14 154 aaKnown RBP6.04□□□□□ -1.44
PDLIM5-209ENST00000506632 PRR27Q6MZM9 219 aa6.04□□□□□ -1.44
PDLIM5-209ENST00000506632 Q6ZNX1 250 aa6.04□□□□□ -1.44
PDLIM5-209ENST00000506632 NIT1Q86X76 327 aa6.04□□□□□ -1.44
PDLIM5-209ENST00000506632 NTN5Q8WTR8 489 aaPredicted RBP6.04□□□□□ -1.44
PDLIM5-209ENST00000506632 Q9HAA7 133 aa6.04□□□□□ -1.44
PDLIM5-209ENST00000506632 TRBV7-3A0A075B6L6 115 aa6.03□□□□□ -1.44
PDLIM5-209ENST00000506632 PSCAO43653 123 aa6.03□□□□□ -1.44
PDLIM5-209ENST00000506632 RAB4BP61018 213 aa6.03□□□□□ -1.44
PDLIM5-209ENST00000506632 DAZ4Q86SG3 579 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-209ENST00000506632 SLC51BQ86UW2 128 aa6.03□□□□□ -1.44
PDLIM5-209ENST00000506632 Q8N814 137 aa6.03□□□□□ -1.44
PDLIM5-209ENST00000506632 DAZ3Q9NR90 486 aaKnown RBP6.03□□□□□ -1.44
PDLIM5-209ENST00000506632 KIF25-AS1Q9Y6Z4 181 aa6.03□□□□□ -1.44
PDLIM5-209ENST00000506632 TRBV20OR9-2A0A075B6H5 130 aa6.02□□□□□ -1.45
PDLIM5-209ENST00000506632 TRAV8-3A0A0A6YYJ7 113 aa6.02□□□□□ -1.45
PDLIM5-209ENST00000506632 C19orf71A6NCJ1 209 aa6.02□□□□□ -1.45
PDLIM5-209ENST00000506632 TEX46H3BTG2 121 aa6.02□□□□□ -1.45
PDLIM5-209ENST00000506632 IGLC6P0CF74 106 aa6.02□□□□□ -1.45
PDLIM5-209ENST00000506632 GCSHP23434 173 aa6.02□□□□□ -1.45
PDLIM5-209ENST00000506632 RPL36AP83881 106 aaKnown RBP6.02□□□□□ -1.45
PDLIM5-209ENST00000506632 MEF2BQ02080 365 aaPredicted RBP6.02□□□□□ -1.45
PDLIM5-209ENST00000506632 WFDC2Q14508 124 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 147.9 ms