RNA–Protein interactions for RNA: ENST00000506630.1

TCOF1-209, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 897 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-209ENST00000506630 RHODO00212 210 aa9.01□□□□□ -0.97
TCOF1-209ENST00000506630 NXPH4O95158 308 aa9.01□□□□□ -0.97
TCOF1-209ENST00000506630 P01737 135 aa9.01□□□□□ -0.97
TCOF1-209ENST00000506630 C1orf134Q5TEV5 83 aa9.01□□□□□ -0.97
TCOF1-209ENST00000506630 LYPD5Q6UWN5 251 aa9.01□□□□□ -0.97
TCOF1-209ENST00000506630 ZFP2Q6ZN57 461 aa9.01□□□□□ -0.97
TCOF1-209ENST00000506630 MAPKAPK5-AS1Q8N8E1 139 aa9.01□□□□□ -0.97
TCOF1-209ENST00000506630 OR10AG1Q8NH19 301 aa9.01□□□□□ -0.97
TCOF1-209ENST00000506630 SAMD10Q9BYL1 202 aa9.01□□□□□ -0.97
TCOF1-209ENST00000506630 BIN3Q9NQY0 253 aa9.01□□□□□ -0.97
TCOF1-209ENST00000506630 A0A087WWL8 130 aa9□□□□□ -0.97
TCOF1-209ENST00000506630 MUC21A0A0G2JKD1 596 aa9□□□□□ -0.97
TCOF1-209ENST00000506630 MUC21A0A140T8X8 626 aa9□□□□□ -0.97
TCOF1-209ENST00000506630 SNAI2O43623 268 aa9□□□□□ -0.97
TCOF1-209ENST00000506630 CDK2AP2O75956 126 aa9□□□□□ -0.97
TCOF1-209ENST00000506630 GZMBP10144 247 aa9□□□□□ -0.97
TCOF1-209ENST00000506630 RPS20P60866 119 aaKnown RBP9□□□□□ -0.97
TCOF1-209ENST00000506630 SPANXN1Q5VSR9 72 aa9□□□□□ -0.97
TCOF1-209ENST00000506630 TEX261Q6UWH6 196 aa9□□□□□ -0.97
TCOF1-209ENST00000506630 OR2D3Q8NGH3 330 aa9□□□□□ -0.97
TCOF1-209ENST00000506630 SFRP2Q96HF1 295 aa9□□□□□ -0.97
TCOF1-209ENST00000506630 FAM210AQ96ND0 272 aa9□□□□□ -0.97
TCOF1-209ENST00000506630 TPPP3Q9BW30 176 aa9□□□□□ -0.97
TCOF1-209ENST00000506630 C16orf90A8MZG2 172 aa8.99□□□□□ -0.97
TCOF1-209ENST00000506630 SIVA1O15304 175 aa8.99□□□□□ -0.97
TCOF1-209ENST00000506630 OR5AL1P0C617 328 aa8.99□□□□□ -0.97
TCOF1-209ENST00000506630 SSTP61278 116 aa8.99□□□□□ -0.97
TCOF1-209ENST00000506630 TTC32Q5I0X7 151 aa8.99□□□□□ -0.97
TCOF1-209ENST00000506630 UFSP1Q6NVU6 142 aa8.99□□□□□ -0.97
TCOF1-209ENST00000506630 Q6ZSN1 163 aa8.99□□□□□ -0.97
TCOF1-209ENST00000506630 SH2D6Q7Z4S9 175 aa8.99□□□□□ -0.97
TCOF1-209ENST00000506630 ABCA13Q86UQ4 5058 aa8.98□□□□□ -0.97
TCOF1-209ENST00000506630 XKRY2A2RUG3 117 aa8.98□□□□□ -0.97
TCOF1-209ENST00000506630 K7EN84 100 aa8.98□□□□□ -0.97
TCOF1-209ENST00000506630 C14orf178Q8N769 122 aaPredicted RBP8.98□□□□□ -0.97
TCOF1-209ENST00000506630 OCC1Q8TAD7 63 aa8.98□□□□□ -0.97
TCOF1-209ENST00000506630 GAGE12JA6NER3 117 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 CRYGDP07320 174 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 GAGE1Q13065 139 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 GAGE4Q13068 117 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 GAGE5Q13069 117 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 ZNF56Q15929 161 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 GAGE13Q4V321 117 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 WFDC10BQ8IUB3 73 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 C6orf223Q8N319 242 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 FER1L6-AS1Q8NA97 138 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 NUDT10Q8NFP7 164 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 NUDT11Q96G61 164 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 SSBP4Q9BWG4 385 aaPredicted RBP8.97□□□□□ -0.97
TCOF1-209ENST00000506630 KRTAP1-5Q9BYS1 174 aa8.97□□□□□ -0.97
TCOF1-209ENST00000506630 RNASE7Q9H1E1 156 aaKnown RBP8.97□□□□□ -0.97
TCOF1-209ENST00000506630 A0A1W2PPQ1 181 aa8.96□□□□□ -0.98
TCOF1-209ENST00000506630 IGLC6P0CF74 106 aa8.96□□□□□ -0.98
TCOF1-209ENST00000506630 SMIM7Q9BQ49 75 aa8.96□□□□□ -0.98
TCOF1-209ENST00000506630 RPP21Q9H633 154 aaKnown RBP8.96□□□□□ -0.98
TCOF1-209ENST00000506630 ZNF727A8MUV8 499 aa8.95□□□□□ -0.98
TCOF1-209ENST00000506630 NDUFS6O75380 124 aaKnown RBP8.95□□□□□ -0.98
TCOF1-209ENST00000506630 SRP19P09132 144 aaKnown RBP8.95□□□□□ -0.98
TCOF1-209ENST00000506630 SMIM17P0DL12 118 aa8.95□□□□□ -0.98
TCOF1-209ENST00000506630 ATP6V0E2Q8NHE4 81 aa8.95□□□□□ -0.98
TCOF1-209ENST00000506630 AP1S3Q96PC3 154 aa8.95□□□□□ -0.98
TCOF1-209ENST00000506630 LY96Q9Y6Y9 160 aa8.95□□□□□ -0.98
TCOF1-209ENST00000506630 LINC00694P0DN24 101 aa8.94□□□□□ -0.98
TCOF1-209ENST00000506630 TIRAPP58753 221 aa8.94□□□□□ -0.98
TCOF1-209ENST00000506630 CACNG7P62955 275 aa8.94□□□□□ -0.98
TCOF1-209ENST00000506630 OR10J3Q5JRS4 329 aa8.94□□□□□ -0.98
TCOF1-209ENST00000506630 Q8N1X5 172 aa8.94□□□□□ -0.98
TCOF1-209ENST00000506630 GTSF1LQ9H1H1 148 aa8.94□□□□□ -0.98
TCOF1-209ENST00000506630 Q9UF83 564 aa8.94□□□□□ -0.98
TCOF1-209ENST00000506630 TRAV8-6A0A0B4J262 113 aa8.93□□□□□ -0.98
TCOF1-209ENST00000506630 F5H697 171 aa8.93□□□□□ -0.98
TCOF1-209ENST00000506630 GATCO43716 136 aaKnown RBP8.93□□□□□ -0.98
TCOF1-209ENST00000506630 MGPP08493 103 aa8.93□□□□□ -0.98
TCOF1-209ENST00000506630 RAB4BP61018 213 aa8.93□□□□□ -0.98
TCOF1-209ENST00000506630 TNP2Q05952 138 aa8.93□□□□□ -0.98
TCOF1-209ENST00000506630 LELP1Q5T871 98 aa8.93□□□□□ -0.98
TCOF1-209ENST00000506630 LYZL1Q6UWQ5 148 aa8.93□□□□□ -0.98
TCOF1-209ENST00000506630 LRP1BQ9NZR2 4599 aa8.93□□□□□ -0.98
TCOF1-209ENST00000506630 F2Z2F3 143 aa8.92□□□□□ -0.98
TCOF1-209ENST00000506630 EVI2AP22794 236 aa8.92□□□□□ -0.98
TCOF1-209ENST00000506630 LINC00315P59091 139 aa8.92□□□□□ -0.98
TCOF1-209ENST00000506630 ERVFC1-1P60608 527 aa8.92□□□□□ -0.98
TCOF1-209ENST00000506630 PEA15Q15121 130 aa8.92□□□□□ -0.98
TCOF1-209ENST00000506630 FAM231DQ6ZW35 169 aa8.92□□□□□ -0.98
TCOF1-209ENST00000506630 MSRB1Q9NZV6 116 aa8.92□□□□□ -0.98
TCOF1-209ENST00000506630 TRAV9-2A0A087WT02 112 aa8.91□□□□□ -0.98
TCOF1-209ENST00000506630 IGHV3-38A0A0C4DH36 116 aa8.91□□□□□ -0.98
TCOF1-209ENST00000506630 TRBV10-1A0A0K0K1A3 114 aa8.91□□□□□ -0.98
TCOF1-209ENST00000506630 TRGC1P0CF51 173 aa8.91□□□□□ -0.98
TCOF1-209ENST00000506630 DNAH10OSP0CZ25 163 aa8.91□□□□□ -0.98
TCOF1-209ENST00000506630 CTRLP40313 264 aa8.91□□□□□ -0.98
TCOF1-209ENST00000506630 RPL36AP83881 106 aaKnown RBP8.91□□□□□ -0.98
TCOF1-209ENST00000506630 SRSF3P84103 164 aaKnown RBP8.91□□□□□ -0.98
TCOF1-209ENST00000506630 LINC01551Q86U37 167 aa8.91□□□□□ -0.98
TCOF1-209ENST00000506630 RPL36ALQ969Q0 106 aaKnown RBP8.91□□□□□ -0.98
TCOF1-209ENST00000506630 HSPG2P98160 4391 aa8.91□□□□□ -0.98
TCOF1-209ENST00000506630 DNAH5Q8TE73 4624 aa8.9□□□□□ -0.98
TCOF1-209ENST00000506630 FAM74A3Q4VXF1 159 aa8.9□□□□□ -0.98
TCOF1-209ENST00000506630 NEXN-AS1Q8NBZ9 246 aa8.9□□□□□ -0.98
TCOF1-209ENST00000506630 KIF25-AS1Q9Y6Z4 181 aa8.9□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms