RNA–Protein interactions for RNA: ENST00000506137.1

HTT-203, Transcript of huntingtin, humanhuman

TSL 3

Gene HTT, Length 781 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-203ENST00000506137 RPL18Q07020 188 aaKnown RBP6.5□□□□□ -1.37
HTT-203ENST00000506137 SDIM1Q6ZPB5 146 aa6.5□□□□□ -1.37
HTT-203ENST00000506137 MIR17HGQ75NE6 70 aa6.5□□□□□ -1.37
HTT-203ENST00000506137 DYNLRB2Q8TF09 96 aa6.5□□□□□ -1.37
HTT-203ENST00000506137 CHCHD1Q96BP2 118 aaKnown RBP6.5□□□□□ -1.37
HTT-203ENST00000506137 DKK2Q9UBU2 259 aa6.5□□□□□ -1.37
HTT-203ENST00000506137 ESPL1Q14674 2120 aa6.5□□□□□ -1.37
HTT-203ENST00000506137 A0A1W2PQD3 144 aa6.49□□□□□ -1.37
HTT-203ENST00000506137 FAM72CH0Y354 149 aa6.49□□□□□ -1.37
HTT-203ENST00000506137 NOVP48745 357 aa6.49□□□□□ -1.37
HTT-203ENST00000506137 EFNA4P52798 201 aa6.49□□□□□ -1.37
HTT-203ENST00000506137 BRWD1-AS2P59051 145 aa6.49□□□□□ -1.37
HTT-203ENST00000506137 ZNF56Q15929 161 aa6.49□□□□□ -1.37
HTT-203ENST00000506137 FAM72DQ6L9T8 149 aa6.49□□□□□ -1.37
HTT-203ENST00000506137 ITLN1Q8WWA0 313 aa6.49□□□□□ -1.37
HTT-203ENST00000506137 ITLN2Q8WWU7 325 aaPredicted RBP6.49□□□□□ -1.37
HTT-203ENST00000506137 IFI27L1Q96BM0 104 aa6.49□□□□□ -1.37
HTT-203ENST00000506137 MSRB1Q9NZV6 116 aa6.49□□□□□ -1.37
HTT-203ENST00000506137 DPM3Q9P2X0 92 aa6.49□□□□□ -1.37
HTT-203ENST00000506137 EML6Q6ZMW3 1958 aa6.49□□□□□ -1.37
HTT-203ENST00000506137 PTPRDP23468 1912 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 TRAV13-2A0A0B4J235 113 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 IGHV3-48P01763 117 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 RNASE2P10153 161 aaKnown RBP6.48□□□□□ -1.37
HTT-203ENST00000506137 UBE2D3P61077 147 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 UBE2D2P62837 147 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 KLKP1Q107X0 134 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 RHOHQ15669 191 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 ADAMTSL4-AS1Q5T5F5 129 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 C9orf57Q5W0N0 161 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 CCL4L1Q8NHW4 92 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 SLC50A1Q9BRV3 221 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 CEP192Q8TEP8 1941 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 MEGF8Q7Z7M0 2845 aa6.48□□□□□ -1.37
HTT-203ENST00000506137 ZNF469Q96JG9 3925 aaPredicted RBP6.47□□□□□ -1.37
HTT-203ENST00000506137 PIRTP0C851 137 aa6.47□□□□□ -1.37
HTT-203ENST00000506137 ZNF816Q0VGE8 651 aaPredicted RBP6.47□□□□□ -1.37
HTT-203ENST00000506137 SPANXN1Q5VSR9 72 aa6.47□□□□□ -1.37
HTT-203ENST00000506137 Q6ZPA2 131 aa6.47□□□□□ -1.37
HTT-203ENST00000506137 EXPH5Q8NEV8 1989 aa6.47□□□□□ -1.37
HTT-203ENST00000506137 MYMXA0A1B0GTQ4 84 aa6.46□□□□□ -1.38
HTT-203ENST00000506137 A6NN06 94 aa6.46□□□□□ -1.38
HTT-203ENST00000506137 IGLV2-8P01709 118 aa6.46□□□□□ -1.38
HTT-203ENST00000506137 BGLAPP02818 100 aa6.46□□□□□ -1.38
HTT-203ENST00000506137 ZNF32P17041 273 aa6.46□□□□□ -1.38
HTT-203ENST00000506137 RBM3P98179 157 aaKnown RBP6.46□□□□□ -1.38
HTT-203ENST00000506137 C17orf58Q2M2W7 97 aa6.46□□□□□ -1.38
HTT-203ENST00000506137 MRPL51Q4U2R6 128 aaKnown RBP6.46□□□□□ -1.38
HTT-203ENST00000506137 PATE2Q6UY27 113 aa6.46□□□□□ -1.38
HTT-203ENST00000506137 FAM104AQ969W3 186 aa6.46□□□□□ -1.38
HTT-203ENST00000506137 Q96M85 177 aa6.46□□□□□ -1.38
HTT-203ENST00000506137 SMIM7Q9BQ49 75 aa6.46□□□□□ -1.38
HTT-203ENST00000506137 GNG13Q9P2W3 67 aa6.46□□□□□ -1.38
HTT-203ENST00000506137 HILPDAQ9Y5L2 63 aa6.46□□□□□ -1.38
HTT-203ENST00000506137 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.45□□□□□ -1.389e-12■■■■■ 36.8
HTT-203ENST00000506137 ANAPC1Q9H1A4 1944 aa6.45□□□□□ -1.38
HTT-203ENST00000506137 TRAV1-2A0A0B4J238 106 aa6.45□□□□□ -1.38
HTT-203ENST00000506137 H3BMM0 161 aa6.45□□□□□ -1.38
HTT-203ENST00000506137 C3orf84H3BNL1 204 aa6.45□□□□□ -1.38
HTT-203ENST00000506137 MDKP21741 143 aaPredicted RBP6.45□□□□□ -1.38
HTT-203ENST00000506137 RPL27AP46776 148 aaKnown RBP6.45□□□□□ -1.38
HTT-203ENST00000506137 ESRGQ1W209 222 aa6.45□□□□□ -1.38
HTT-203ENST00000506137 LINC00114Q6XXX2 140 aa6.45□□□□□ -1.38
HTT-203ENST00000506137 DAND5Q8N907 189 aa6.45□□□□□ -1.38
HTT-203ENST00000506137 UBE2WQ96B02 151 aa6.45□□□□□ -1.38
HTT-203ENST00000506137 SCGB3A1Q96QR1 104 aa6.45□□□□□ -1.38
HTT-203ENST00000506137 TXNDC17Q9BRA2 123 aa6.45□□□□□ -1.38
HTT-203ENST00000506137 ZNF71Q9NQZ8 489 aaPredicted RBP6.45□□□□□ -1.38
HTT-203ENST00000506137 IGHV3-38A0A0C4DH36 116 aa6.44□□□□□ -1.38
HTT-203ENST00000506137 SLC25A20O43772 301 aa6.44□□□□□ -1.38
HTT-203ENST00000506137 SLC25A16P16260 332 aa6.44□□□□□ -1.38
HTT-203ENST00000506137 PEBP1P30086 187 aaKnown RBP6.44□□□□□ -1.38
HTT-203ENST00000506137 DPTQ07507 201 aa6.44□□□□□ -1.38
HTT-203ENST00000506137 C16orf47Q6ZP98 133 aaPredicted RBP6.44□□□□□ -1.38
HTT-203ENST00000506137 CLEC2BQ92478 149 aa6.44□□□□□ -1.38
HTT-203ENST00000506137 TIMM21Q9BVV7 248 aa6.44□□□□□ -1.38
HTT-203ENST00000506137 CCL28Q9NRJ3 127 aa6.44□□□□□ -1.38
HTT-203ENST00000506137 MAP1AP78559 2803 aaPredicted RBP6.44□□□□□ -1.38
HTT-203ENST00000506137 RYR3Q15413 4870 aa6.43□□□□□ -1.38
HTT-203ENST00000506137 A0A1B0GWA3 101 aa6.43□□□□□ -1.38
HTT-203ENST00000506137 K7EQG2 157 aa6.43□□□□□ -1.38
HTT-203ENST00000506137 COX7A1P24310 79 aa6.43□□□□□ -1.38
HTT-203ENST00000506137 CD52P31358 61 aa6.43□□□□□ -1.38
HTT-203ENST00000506137 FAM53AQ6NSI3 398 aaPredicted RBP6.43□□□□□ -1.38
HTT-203ENST00000506137 C18orf65Q6ZTR6 163 aa6.43□□□□□ -1.38
HTT-203ENST00000506137 TMEM61Q8N0U2 210 aa6.43□□□□□ -1.38
HTT-203ENST00000506137 RNASE6Q93091 150 aaKnown RBP6.43□□□□□ -1.38
HTT-203ENST00000506137 NOTCH4Q99466 2003 aa6.43□□□□□ -1.38
HTT-203ENST00000506137 KMT2CQ8NEZ4 4911 aaKnown RBP6.43□□□□□ -1.38
HTT-203ENST00000506137 ZFC3H1O60293 1989 aaKnown RBP6.42□□□□□ -1.38
HTT-203ENST00000506137 FAM229AH3BQW9 127 aa6.42□□□□□ -1.38
HTT-203ENST00000506137 H7BZZ5 65 aa6.42□□□□□ -1.38
HTT-203ENST00000506137 LEPROTO15243 131 aa6.42□□□□□ -1.38
HTT-203ENST00000506137 IGKV1-16P04430 117 aa6.42□□□□□ -1.38
HTT-203ENST00000506137 LINC00467Q9BRT7 94 aa6.42□□□□□ -1.38
HTT-203ENST00000506137 NHP2Q9NX24 153 aaKnown RBP6.42□□□□□ -1.38
HTT-203ENST00000506137 SMAD5-AS1Q9Y6J3 95 aa6.42□□□□□ -1.38
HTT-203ENST00000506137 OBSL1O75147 1896 aa6.41□□□□□ -1.38
HTT-203ENST00000506137 CPAMD8Q8IZJ3 1885 aa6.41□□□□□ -1.38
HTT-203ENST00000506137 A0A0B4J2C4 111 aa6.41□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms