RNA–Protein interactions for RNA: ENST00000506055.5

PPARGC1A-204, Transcript of PPARG coactivator 1 alpha, humanhuman

TSL 1 (best)

Gene PPARGC1A, Length 2,627 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1A-204ENST00000506055 SYNJ2BPP57105 145 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 SNRPD3P62318 126 aaKnown RBP5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 AMTNQ6UX39 209 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 FOXI2Q6ZQN5 318 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 KIR2DL4Q99706 377 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 ZNF256Q9Y2P7 627 aaPredicted RBP5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 CENPEQ02224 2701 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 CSPG4Q6UVK1 2322 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 AGRNO00468 2067 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 TRBV7-3A0A075B6L6 115 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 IGHV4OR15-8A0A075B7B6 117 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 A0A087WW49 117 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 VCYO14598 125 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 SRSF9Q13242 221 aaKnown RBP eCLIP5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 COTL1Q14019 142 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 SPINK13Q1W4C9 94 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 Q8N1Y9 231 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 POM121L12Q8N7R1 296 aa5.68□□□□□ -1.5
PPARGC1A-204ENST00000506055 IGSF10Q6WRI0 2623 aa5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 IGIPA6NJ69 53 aa5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 C11orf86A6NJI1 115 aa5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 HTN1P15515 57 aa5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 POLR2KP53803 58 aaKnown RBP5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 ZNF56Q15929 161 aa5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 MTURNQ8N3F0 131 aa5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 PLEKHB2Q96CS7 222 aa5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 MXRA5Q9NR99 2828 aa5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 USP9XQ93008 2570 aaPredicted RBP5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 A0A0J9YX75 114 aa5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 TEX48A0A1B0GUV7 120 aa5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 HOXA3O43365 443 aaPredicted RBP5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 TGFAP01135 160 aa5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 WFDC2Q14508 124 aa5.67□□□□□ -1.5
PPARGC1A-204ENST00000506055 IGLV4-69A0A075B6H9 119 aa5.66□□□□□ -1.5
PPARGC1A-204ENST00000506055 IGHV3-16A0A0C4DH30 117 aa5.66□□□□□ -1.5
PPARGC1A-204ENST00000506055 PMVKQ15126 192 aa5.66□□□□□ -1.5
PPARGC1A-204ENST00000506055 TMEM170BQ5T4T1 132 aa5.66□□□□□ -1.5
PPARGC1A-204ENST00000506055 SFTA2Q6UW10 78 aa5.66□□□□□ -1.5
PPARGC1A-204ENST00000506055 SAMD13Q5VXD3 122 aa5.66□□□□□ -1.5
PPARGC1A-204ENST00000506055 OPRPNQ99935 248 aaPredicted RBP5.66□□□□□ -1.5
PPARGC1A-204ENST00000506055 FBN2P35556 2912 aa5.66□□□□□ -1.5
PPARGC1A-204ENST00000506055 CUBNO60494 3623 aa5.65□□□□□ -1.5
PPARGC1A-204ENST00000506055 MYO18BQ8IUG5 2567 aa5.65□□□□□ -1.5
PPARGC1A-204ENST00000506055 F8W1H4 67 aa5.65□□□□□ -1.5
PPARGC1A-204ENST00000506055 COX6B1P14854 86 aa5.65□□□□□ -1.5
PPARGC1A-204ENST00000506055 GATA3P23771 443 aa5.65□□□□□ -1.5
PPARGC1A-204ENST00000506055 RRN3P1Q2M238 152 aa5.65□□□□□ -1.5
PPARGC1A-204ENST00000506055 ZNF876PQ49A33 203 aa5.65□□□□□ -1.5
PPARGC1A-204ENST00000506055 LINC01356Q8N9X3 169 aa5.65□□□□□ -1.5
PPARGC1A-204ENST00000506055 SYT8Q8NBV8 401 aa5.65□□□□□ -1.5
PPARGC1A-204ENST00000506055 MRPL16Q9NX20 251 aaKnown RBP5.65□□□□□ -1.5
PPARGC1A-204ENST00000506055 PGPEP1Q9NXJ5 209 aa5.65□□□□□ -1.5
PPARGC1A-204ENST00000506055 IGHV1OR15-1A0A075B7D0 117 aa5.65□□□□□ -1.51
PPARGC1A-204ENST00000506055 TRBV27A0A0K0K1C4 114 aa5.65□□□□□ -1.51
PPARGC1A-204ENST00000506055 K7EQG2 157 aa5.65□□□□□ -1.51
PPARGC1A-204ENST00000506055 M0QY20 66 aa5.65□□□□□ -1.51
PPARGC1A-204ENST00000506055 LGALS9O00182 355 aa5.65□□□□□ -1.51
PPARGC1A-204ENST00000506055 RPL32P62910 135 aaKnown RBP5.65□□□□□ -1.51
PPARGC1A-204ENST00000506055 ZNRF2Q8NHG8 242 aa5.65□□□□□ -1.51
PPARGC1A-204ENST00000506055 TMEM141Q96I45 108 aa5.65□□□□□ -1.51
PPARGC1A-204ENST00000506055 C9orf85Q96MD7 179 aa5.65□□□□□ -1.51
PPARGC1A-204ENST00000506055 ZNF580Q9UK33 172 aa5.65□□□□□ -1.51
PPARGC1A-204ENST00000506055 DOPEY1Q5JWR5 2465 aa5.65□□□□□ -1.51
PPARGC1A-204ENST00000506055 POLQO75417 2590 aa5.65□□□□□ -1.51
PPARGC1A-204ENST00000506055 LINC01619G3V211 115 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 HOXD3P31249 432 aaPredicted RBP5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 HERVK_113P61574 105 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 GAGE13Q4V321 117 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 MORN3Q6PF18 240 aaPredicted RBP5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 SH2D6Q7Z4S9 175 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 DOPEY2Q9Y3R5 2298 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 CACNA1AO00555 2505 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 USP9YO00507 2555 aaPredicted RBP5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 IGHV3-73A0A0B4J1V6 119 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 A0A1B0GWB2 263 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 LINC01549A6NIU2 74 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 APOMO95445 188 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 DSCR9P59020 149 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 ETDBQ3ZM63 59 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 PAPPA-AS1Q5QFB9 102 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 TIMM17AQ99595 171 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 SORL1Q92673 2214 aa5.64□□□□□ -1.51
PPARGC1A-204ENST00000506055 TMEM238LA0A1B0GVL6 79 aa5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 A6NJY4 79 aa5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 PRM2P04554 102 aa5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 TSPEAR-AS2P59090 65 aa5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 DEFB136Q30KP8 78 aa5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 BEX4Q9NWD9 120 aaPredicted RBP5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 IGHV3-64A0A075B6Q5 118 aa5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 LOC107984156A0A0G2JMH3 177 aa5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 TRBV6-5A0A0K0K1A5 114 aa5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 KNCNA6PVL3 124 aa5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 TCTEX1D4Q5JR98 221 aa5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 ARL17AQ8IVW1 177 aa5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 ODF3Q96PU9 254 aa5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 SPANXB1Q9NS25 103 aaPredicted RBP5.63□□□□□ -1.51
PPARGC1A-204ENST00000506055 A0A0J9YY99 117 aa5.62□□□□□ -1.51
PPARGC1A-204ENST00000506055 TRPT1Q86TN4 253 aaKnown RBP5.62□□□□□ -1.51
PPARGC1A-204ENST00000506055 VPREB3Q9UKI3 123 aa5.62□□□□□ -1.51
PPARGC1A-204ENST00000506055 ACACBO00763 2458 aa5.62□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms