RNA–Protein interactions for RNA: ENST00000505226.1

UBE3D-206, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 3,255 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-206ENST00000505226 A0A087WW49 117 aa8.89□□□□□ -0.99
UBE3D-206ENST00000505226 CRIP2P52943 208 aaPredicted RBP8.89□□□□□ -0.99
UBE3D-206ENST00000505226 CARD19Q96LW7 228 aa8.89□□□□□ -0.99
UBE3D-206ENST00000505226 CFC1BP0CG36 223 aa8.88□□□□□ -0.99
UBE3D-206ENST00000505226 CFC1P0CG37 223 aa8.88□□□□□ -0.99
UBE3D-206ENST00000505226 SYT8Q8NBV8 401 aa8.88□□□□□ -0.99
UBE3D-206ENST00000505226 OPRPNQ99935 248 aaPredicted RBP8.88□□□□□ -0.99
UBE3D-206ENST00000505226 CSMD2Q7Z408 3487 aa8.88□□□□□ -0.99
UBE3D-206ENST00000505226 IGHV3-30P01768 117 aa8.88□□□□□ -0.99
UBE3D-206ENST00000505226 IGHV3-30-5P0DP03 117 aa8.88□□□□□ -0.99
UBE3D-206ENST00000505226 LY6EQ16553 131 aa8.88□□□□□ -0.99
UBE3D-206ENST00000505226 ATP6V0BQ99437 205 aa8.88□□□□□ -0.99
UBE3D-206ENST00000505226 RHPN1-AS1Q9BWJ2 59 aa8.88□□□□□ -0.99
UBE3D-206ENST00000505226 EIF4EBP3O60516 100 aaPredicted RBP8.88□□□□□ -0.99
UBE3D-206ENST00000505226 TCL1BO95988 128 aa8.88□□□□□ -0.99
UBE3D-206ENST00000505226 KLLNB2CW77 178 aa8.87□□□□□ -0.99
UBE3D-206ENST00000505226 TGFAP01135 160 aa8.87□□□□□ -0.99
UBE3D-206ENST00000505226 PMVKQ15126 192 aa8.87□□□□□ -0.99
UBE3D-206ENST00000505226 ITPR1Q14643 2758 aa8.87□□□□□ -0.99
UBE3D-206ENST00000505226 TMEM238LA0A1B0GVL6 79 aa8.87□□□□□ -0.99
UBE3D-206ENST00000505226 A6NJY4 79 aa8.87□□□□□ -0.99
UBE3D-206ENST00000505226 BLCAPP62952 87 aa8.87□□□□□ -0.99
UBE3D-206ENST00000505226 IGHV1-69DA0A0B4J2H0 117 aa8.86□□□□□ -0.99
UBE3D-206ENST00000505226 SDHAF1A6NFY7 115 aa8.86□□□□□ -0.99
UBE3D-206ENST00000505226 TMEM170BQ5T4T1 132 aa8.86□□□□□ -0.99
UBE3D-206ENST00000505226 TRAV12-3A0A0B4J271 114 aa8.86□□□□□ -0.99
UBE3D-206ENST00000505226 KLRB1Q12918 225 aa8.86□□□□□ -0.99
UBE3D-206ENST00000505226 SLC25A29Q8N8R3 303 aa8.86□□□□□ -0.99
UBE3D-206ENST00000505226 F5H697 171 aa8.85□□□□□ -0.99
UBE3D-206ENST00000505226 PPP1R17O96001 155 aa8.85□□□□□ -0.99
UBE3D-206ENST00000505226 MT-ATP8P03928 68 aa8.85□□□□□ -0.99
UBE3D-206ENST00000505226 IGHV4-38-2P0DP08 117 aa8.85□□□□□ -0.99
UBE3D-206ENST00000505226 RPL32P62910 135 aaKnown RBP8.85□□□□□ -0.99
UBE3D-206ENST00000505226 ZNF876PQ49A33 203 aa8.85□□□□□ -0.99
UBE3D-206ENST00000505226 ATP6V0E2Q8NHE4 81 aa8.85□□□□□ -0.99
UBE3D-206ENST00000505226 IGHV1-69P01742 117 aa8.85□□□□□ -0.99
UBE3D-206ENST00000505226 VCYO14598 125 aa8.85□□□□□ -0.99
UBE3D-206ENST00000505226 PF4V1P10720 104 aa8.85□□□□□ -0.99
UBE3D-206ENST00000505226 FAM74A4Q5TZK3 123 aa8.85□□□□□ -0.99
UBE3D-206ENST00000505226 CLUHP3Q96NS8 147 aa8.85□□□□□ -0.99
UBE3D-206ENST00000505226 MDFICQ9P1T7 246 aa8.85□□□□□ -0.99
UBE3D-206ENST00000505226 XGP55808 180 aa8.84□□□□□ -0.99
UBE3D-206ENST00000505226 FAM159AQ6UWV7 190 aa8.84□□□□□ -0.99
UBE3D-206ENST00000505226 ZNF256Q9Y2P7 627 aaPredicted RBP8.84□□□□□ -0.99
UBE3D-206ENST00000505226 TRBV27A0A0K0K1C4 114 aa8.84□□□□□ -0.99
UBE3D-206ENST00000505226 C19orf84I3L1E1 186 aa8.84□□□□□ -0.99
UBE3D-206ENST00000505226 CKS1BP61024 79 aa8.84□□□□□ -0.99
UBE3D-206ENST00000505226 DCANP1Q8TF63 244 aa8.84□□□□□ -0.99
UBE3D-206ENST00000505226 TIMM17AQ99595 171 aa8.84□□□□□ -0.99
UBE3D-206ENST00000505226 TRAV12-2A0A075B6T6 113 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 TRBV7-9A0A0J9YWB2 115 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 IGHG2P01859 326 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 TMEM141Q96I45 108 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 KIR2DL4Q99706 377 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 ZNF580Q9UK33 172 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 CHD8Q9HCK8 2581 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 SORL1Q92673 2214 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 A0A1B0GV72 72 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 J3QQQ9 107 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 IGHV4-39P01824 125 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 P0DMU3 169 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 FAM231AP0DMU4 169 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 FAM231CP0DMU5 169 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 HERVK_113P61574 105 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 C10orf126Q8N4M7 172 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 NCOR2Q9Y618 2525 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 SBSPONQ8IVN8 264 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 USMG5Q96IX5 58 aa8.83□□□□□ -1
UBE3D-206ENST00000505226 H3BUX3 64 aa8.82□□□□□ -1
UBE3D-206ENST00000505226 LGALS9O00182 355 aa8.82□□□□□ -1
UBE3D-206ENST00000505226 IGKV3-20P01619 116 aa8.82□□□□□ -1
UBE3D-206ENST00000505226 PAPPA-AS1Q5QFB9 102 aa8.82□□□□□ -1
UBE3D-206ENST00000505226 DAZ1Q9NQZ3 744 aaKnown RBP8.82□□□□□ -1
UBE3D-206ENST00000505226 IGHV3-64A0A075B6Q5 118 aa8.82□□□□□ -1
UBE3D-206ENST00000505226 M0QY20 66 aa8.82□□□□□ -1
UBE3D-206ENST00000505226 TCTEX1D4Q5JR98 221 aa8.82□□□□□ -1
UBE3D-206ENST00000505226 TEN1Q86WV5 123 aa8.82□□□□□ -1
UBE3D-206ENST00000505226 RAX2Q96IS3 184 aa8.82□□□□□ -1
UBE3D-206ENST00000505226 IGHV3-16A0A0C4DH30 117 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 IGHV4-61A0A0C4DH41 118 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 SPINK8P0C7L1 97 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 TMEM95Q3KNT9 176 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 Q6ZUT4 128 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 A4D1N5 150 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 BRI3O95415 125 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 IGLV1-40P01703 118 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 PRO1854Q9UHT4 67 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 TRBV6-5A0A0K0K1A5 114 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 ELANEP08246 267 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 CRYBA4P53673 196 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 C9orf85Q96MD7 179 aa8.81□□□□□ -1
UBE3D-206ENST00000505226 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.8□□□□□ -1
UBE3D-206ENST00000505226 SPG11Q96JI7 2443 aa8.8□□□□□ -1
UBE3D-206ENST00000505226 A6NDX4 124 aa8.8□□□□□ -1
UBE3D-206ENST00000505226 TRPT1Q86TN4 253 aaKnown RBP8.8□□□□□ -1
UBE3D-206ENST00000505226 Q8N1Y9 231 aa8.8□□□□□ -1
UBE3D-206ENST00000505226 ANKRD29Q8N6D5 301 aa8.8□□□□□ -1
UBE3D-206ENST00000505226 PPDPFLQ8WWR9 84 aa8.8□□□□□ -1
UBE3D-206ENST00000505226 SPTBN4Q9H254 2564 aa8.8□□□□□ -1
UBE3D-206ENST00000505226 TMEM223A0PJW6 202 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms