RNA–Protein interactions for RNA: ENST00000504849.5

RFC1-208, Transcript of replication factor C subunit 1, humanhuman

TSL 3

Gene RFC1, Length 873 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC1-208ENST00000504849 ABCA2Q9BZC7 2435 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 TMSB15BA0A087X1C1 80 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 A0A096LNJ9 63 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 TRAV12-1A0A0B4J245 112 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 RPL37AP8A6NKH3 93 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 OR11H12B2RN74 326 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 IGLL5B9A064 214 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 E7EUB6 86 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 I3L2K1 104 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 NPYP01303 97 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 IL4P05112 153 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 IGHV1-8P0DP01 117 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 COL8A2P25067 703 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 CKS1BP61024 79 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 SMAGPQ0VAQ4 97 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 RRN3P1Q2M238 152 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 TMEM155Q4W5P6 130 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 IGFL2Q6UWQ7 119 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 PCP2Q8IVA1 136 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 OR11H1Q8NG94 326 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 OR11H6Q8NGC7 330 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 OR11H2Q8NH07 326 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 FOXC2Q99958 501 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 NAA38Q9BRA0 125 aaKnown RBP3.08□□□□□ -1.92
RFC1-208ENST00000504849 CNFNQ9BYD5 112 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 GTSF1LQ9H1H1 148 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 SPANXB1Q9NS25 103 aaPredicted RBP3.08□□□□□ -1.92
RFC1-208ENST00000504849 MRPL16Q9NX20 251 aaKnown RBP3.08□□□□□ -1.92
RFC1-208ENST00000504849 KAAG1Q9UBP8 84 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 CYSLTR1Q9Y271 337 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 CEP192Q8TEP8 1941 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 UNC13CQ8NB66 2214 aa3.08□□□□□ -1.92
RFC1-208ENST00000504849 LRBAP50851 2863 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 NCKAP5O14513 1909 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 ABCA7Q8IZY2 2146 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 TLN1Q9Y490 2541 aaKnown RBP3.07□□□□□ -1.92
RFC1-208ENST00000504849 IGLV7-46A0A075B6I9 117 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 TRBV25-1A0A075B6N4 114 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 IGHV1OR15-1A0A075B7D0 117 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 IGHV3OR16-13A0A075B7E8 117 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 A0A087WX48 190 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 A0A087X002 238 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 IGHV3-21A0A0B4J1V1 117 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 IGHV7-81A0A0B4J1V7 117 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 IGHV1-3A0A0C4DH29 117 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 MYMXA0A1B0GTQ4 84 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 WI2-2373I1.2A0A1W2PRP0 233 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 RBAKDNA6NC62 111 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 LINC01549A6NIU2 74 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 FABP5P3A8MUU1 101 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 SMKR1H3BMG3 65 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 H3BMG7 143 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.07□□□□□ -1.92
RFC1-208ENST00000504849 H7C1H1 209 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 K7EMI3 77 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 K7ERJ3 54 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 APOMO95445 188 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 PPP1R17O96001 155 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 ORM1P02763 201 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 IGLC6P0CF74 106 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 SLC25A16P16260 332 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 LOXP28300 417 aaPredicted RBP3.07□□□□□ -1.92
RFC1-208ENST00000504849 FXYD2P54710 66 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 HERVK_113P61574 105 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 PAX8Q06710 450 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 LOXL1Q08397 574 aaPredicted RBP3.07□□□□□ -1.92
RFC1-208ENST00000504849 KLRD1Q13241 179 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 C12orf74Q32Q52 190 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 ORMDL2Q53FV1 153 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 SPRNQ5BIV9 151 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 ZC2HC1BQ5TFG8 222 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 HES3Q5TGS1 186 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 GTSCR1Q86UQ5 136 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 Q8NBF4 154 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 CSNK1G2-AS1Q8NCQ2 148 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 MRAPQ8TCY5 172 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 CHCHD10Q8WYQ3 142 aaPredicted RBP3.07□□□□□ -1.92
RFC1-208ENST00000504849 C18orf15Q96N68 181 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 SLC50A1Q9BRV3 221 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 DYNLRB1Q9NP97 96 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 SPANXA1Q9NS26 97 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 ZNRD1Q9P1U0 126 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 CTSZQ9UBR2 303 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 MED12Q93074 2177 aa3.07□□□□□ -1.92
RFC1-208ENST00000504849 IGHV3-72A0A0B4J1Y9 119 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 COL6A6A6NMZ7 2263 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 TMEM262E9PQX1 116 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 F8VRH5 84 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 BUB1B-PAK6H3BSN5 160 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 K7EIM0 57 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 CDX4O14627 284 aaPredicted RBP3.06□□□□□ -1.92
RFC1-208ENST00000504849 BRI3O95415 125 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 IGKV1-17P01599 117 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 CRIP1P50238 77 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 DLX6P56179 175 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 CCL8P80075 99 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 MRGPRG-AS1Q2M3A8 158 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 KRTAP24-1Q3LI83 254 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 NOTCH2NLQ7Z3S9 236 aa3.06□□□□□ -1.92
RFC1-208ENST00000504849 FDCSPQ8NFU4 85 aa3.06□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms