RNA–Protein interactions for RNA: ENST00000504841.6

NPIPB3-203, Transcript of nuclear pore complex interacting protein family member B3, humanhuman

APPRIS P1 TSL 1 (best)

Gene NPIPB3, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3-203ENST00000504841 ZFP69Q49AA0 526 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 FAM74A4Q5TZK3 123 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 Q6ZRU5 148 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 C15orf54Q8N8G6 183 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 OR2G3Q8NGZ4 309 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 ZC2HC1AQ96GY0 325 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 OR5AC2Q9NZP5 309 aa4.43□□□□□ -1.7
NPIPB3-203ENST00000504841 SIX6O95475 246 aa4.42□□□□□ -1.7
NPIPB3-203ENST00000504841 H2BFSP57053 126 aa4.42□□□□□ -1.7
NPIPB3-203ENST00000504841 Q0VG73 95 aa4.42□□□□□ -1.7
NPIPB3-203ENST00000504841 ATRAIDQ6UW56 229 aa4.42□□□□□ -1.7
NPIPB3-203ENST00000504841 CLPSL2Q6UWE3 100 aa4.42□□□□□ -1.7
NPIPB3-203ENST00000504841 ZFP2Q6ZN57 461 aa4.42□□□□□ -1.7
NPIPB3-203ENST00000504841 PRNTQ86SH4 94 aa4.42□□□□□ -1.7
NPIPB3-203ENST00000504841 OR10G9Q8NGN4 311 aa4.42□□□□□ -1.7
NPIPB3-203ENST00000504841 PPP1R1CQ8WVI7 109 aa4.42□□□□□ -1.7
NPIPB3-203ENST00000504841 DPH3Q96FX2 82 aa4.42□□□□□ -1.7
NPIPB3-203ENST00000504841 LINC00479Q96M42 142 aa4.42□□□□□ -1.7
NPIPB3-203ENST00000504841 SMIM3Q9BZL3 60 aa4.42□□□□□ -1.7
NPIPB3-203ENST00000504841 A0A087WWL8 130 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 A0A1W2PPV4 95 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 H3BVH4 76 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 K7EQM0 130 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 RHODO00212 210 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 MPC2O95563 127 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 ANGP03950 147 aaKnown RBP4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 TCRAP04437 139 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 PRSS1P07477 247 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 RAB2AP61019 212 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 RGS21Q2M5E4 152 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 SMUG1Q53HV7 270 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 ENHOQ6UWT2 76 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 SCGB1C1Q8TD33 95 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 PTH2Q96A98 100 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 CHCHD7Q9BUK0 85 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 MED28Q9H204 178 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 PSG8Q9UQ74 426 aa4.41□□□□□ -1.7
NPIPB3-203ENST00000504841 IGKV3D-20A0A0C4DH25 116 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 SERTM2A0A1B0GWG4 89 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 H0YIZ8 118 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 GAS8-AS1O95177 125 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 CHTF8P0CG12 524 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 ARL14EPLP0DKL9 152 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 RPL36AP83881 106 aaKnown RBP4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 FLI1Q01543 452 aaPredicted RBP4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 MPV17L2Q567V2 206 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 UFSP1Q6NVU6 142 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 PQLC2Q6ZP29 291 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 C9orf163Q8N9P6 203 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 C5orf17Q8NAS9 161 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 HSD17B11Q8NBQ5 300 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 OR10G7Q8NGN6 311 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 RPL36ALQ969Q0 106 aaKnown RBP4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 ALG5Q9Y673 324 aa4.4□□□□□ -1.71
NPIPB3-203ENST00000504841 GRIFINA4D1Z8 144 aa4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 B4DEV8 164 aa4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 M0R036 132 aa4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 M0R381 172 aa4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 RPL12P30050 165 aaKnown RBP4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 RPL19P84098 196 aaKnown RBP4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 DGAT2L7PQ6IED9 249 aa4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 SDIM1Q6ZPB5 146 aa4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 ARL6IP6Q8N6S5 226 aa4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 OR11H4Q8NGC9 324 aa4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 CHCHD5Q9BSY4 110 aa4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 KRTAP4-9Q9BYQ8 210 aa4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 HSPB11Q9Y547 144 aa4.39□□□□□ -1.71
NPIPB3-203ENST00000504841 A0A087WYN8 130 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 TRBV6-8A0A0A6YYG3 113 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 TRAV34A0A0B4J273 112 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 hDV102S1A0JD36 115 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 PHOX2AO14813 284 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 GIPP09681 153 aaPredicted RBP4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 ARMS2P0C7Q2 107 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 CDC34P49427 236 aaPredicted RBP4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 UBE2D3P61077 147 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 UBE2D2P62837 147 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 SUMO1P63165 101 aaKnown RBP4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 MIAQ16674 131 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 SAPCD1Q5SSQ6 148 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 IL36BQ9NZH7 164 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 PHLDA3Q9Y5J5 127 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 PKHD1L1Q86WI1 4243 aa4.38□□□□□ -1.71
NPIPB3-203ENST00000504841 IGLV10-54A0A075B6I4 117 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 TRBV7-3A0A075B6L6 115 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 TMSB15BA0A087X1C1 80 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 TRBV10-1A0A0K0K1A3 114 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 FABP5P3A8MUU1 101 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 TPT1P13693 172 aaKnown RBP4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 GCHFRP30047 84 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 SRSF3P84103 164 aaKnown RBP4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 GAGE6Q13070 117 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 ZNF56Q15929 161 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 PIK3CD-AS1Q5SR53 167 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 KRTAP5-3Q6L8H2 238 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 C7orf33Q8WU49 177 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 WFDC1Q9HC57 220 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 EPDR1Q9UM22 224 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 KIF25-AS1Q9Y6Z4 181 aa4.37□□□□□ -1.71
NPIPB3-203ENST00000504841 ARL2-SNX15V9GYD0 113 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms