RNA–Protein interactions for RNA: ENST00000504409.3

LINC02397-201, Transcript of long intergenic non-protein coding RNA 2397, humanhuman

TSL 1 (best) BASIC

Gene LINC02397, Length 10,626 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02397-201ENST00000504409 ESRGQ1W209 222 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 WDR86Q86TI4 376 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 EIF4EBP3O60516 100 aaPredicted RBP4.69□□□□□ -1.66
LINC02397-201ENST00000504409 TRGV4A0A0C4DH28 118 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 TRIAP1O43715 76 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 IGHV3-30-3P0DP02 117 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 VMO1Q7Z5L0 202 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 CACNA1GO43497 2377 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 TGFBR3LH3BV60 316 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 K7EIM0 57 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 KHDC1LQ5JSQ8 128 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP4.69□□□□□ -1.66
LINC02397-201ENST00000504409 J3QLI3 93 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 BEAN1Q3B7T3 259 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 ZNF71Q9NQZ8 489 aaPredicted RBP4.69□□□□□ -1.66
LINC02397-201ENST00000504409 EFNA4P52798 201 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 ICE1Q9Y2F5 2266 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 WT1P19544 449 aaPredicted RBP4.69□□□□□ -1.66
LINC02397-201ENST00000504409 C20orf197Q8N268 126 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 CDIP1Q9H305 208 aa4.69□□□□□ -1.66
LINC02397-201ENST00000504409 TRBV7-6A0A0J9YX20 115 aa4.68□□□□□ -1.66
LINC02397-201ENST00000504409 B3GALT5-AS1P59052 145 aa4.68□□□□□ -1.66
LINC02397-201ENST00000504409 CHKB-CPT1BH3BT56 60 aa4.68□□□□□ -1.66
LINC02397-201ENST00000504409 RP1L1Q8IWN7 2480 aaPredicted RBP4.68□□□□□ -1.66
LINC02397-201ENST00000504409 C8orf49Q96NF6 230 aa4.68□□□□□ -1.66
LINC02397-201ENST00000504409 CTSGP08311 255 aa4.68□□□□□ -1.66
LINC02397-201ENST00000504409 DIRC1Q969H9 104 aa4.68□□□□□ -1.66
LINC02397-201ENST00000504409 C17orf58Q2M2W7 97 aa4.68□□□□□ -1.66
LINC02397-201ENST00000504409 I3L2K1 104 aa4.68□□□□□ -1.66
LINC02397-201ENST00000504409 BPY2O14599 106 aa4.68□□□□□ -1.66
LINC02397-201ENST00000504409 SUMO4Q6EEV6 95 aa4.68□□□□□ -1.66
LINC02397-201ENST00000504409 SPRNQ5BIV9 151 aa4.68□□□□□ -1.66
LINC02397-201ENST00000504409 IGLV11-55A0A075B6I3 123 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 PRYO14603 147 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 FGF23Q9GZV9 251 aaPredicted RBP4.67□□□□□ -1.66
LINC02397-201ENST00000504409 IGHV7-4-1A0A0J9YVY3 117 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 H3BUX3 64 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 IGHV1-46P01743 117 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 IGKV1-16P04430 117 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 HOXB4P17483 251 aaPredicted RBP4.67□□□□□ -1.66
LINC02397-201ENST00000504409 FAM30AQ9NZY2 134 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 HHLA3Q9XRX5 114 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 LINC00308Q8TCZ7 52 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 CGB1A6NKQ9 187 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 BRI3O95415 125 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 RNASE6Q93091 150 aaKnown RBP4.67□□□□□ -1.66
LINC02397-201ENST00000504409 C16orf74Q96GX8 76 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 TMEM92Q6UXU6 159 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 SMKR1H3BMG3 65 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 K7EQD1 137 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 DHRS4-AS1Q9P1J3 65 aa4.67□□□□□ -1.66
LINC02397-201ENST00000504409 IGHV3-21A0A0B4J1V1 117 aa4.66□□□□□ -1.66
LINC02397-201ENST00000504409 IGLV2-14P01704 120 aa4.66□□□□□ -1.66
LINC02397-201ENST00000504409 KLK5Q9Y337 293 aaPredicted RBP4.66□□□□□ -1.66
LINC02397-201ENST00000504409 DEFB119Q8N690 84 aa4.66□□□□□ -1.66
LINC02397-201ENST00000504409 DPH3Q96FX2 82 aa4.66□□□□□ -1.66
LINC02397-201ENST00000504409 MED13Q9UHV7 2174 aa4.66□□□□□ -1.66
LINC02397-201ENST00000504409 PCSK5Q92824 1860 aa4.66□□□□□ -1.66
LINC02397-201ENST00000504409 PRR15Q8IV56 129 aa4.66□□□□□ -1.66
LINC02397-201ENST00000504409 ZNF580Q9UK33 172 aa4.66□□□□□ -1.66
LINC02397-201ENST00000504409 A6NED7 52 aa4.65□□□□□ -1.66
LINC02397-201ENST00000504409 MRPS12O15235 138 aaKnown RBP4.65□□□□□ -1.66
LINC02397-201ENST00000504409 SHISA2Q6UWI4 295 aa4.65□□□□□ -1.66
LINC02397-201ENST00000504409 RHPN1-AS1Q9BWJ2 59 aa4.65□□□□□ -1.66
LINC02397-201ENST00000504409 PTPRSQ13332 1948 aa4.65□□□□□ -1.66
LINC02397-201ENST00000504409 TNCP24821 2201 aa4.65□□□□□ -1.66
LINC02397-201ENST00000504409 LOXP28300 417 aaPredicted RBP4.65□□□□□ -1.66
LINC02397-201ENST00000504409 PRSS33Q8NF86 280 aa4.65□□□□□ -1.66
LINC02397-201ENST00000504409 RETNQ9HD89 108 aa4.65□□□□□ -1.66
LINC02397-201ENST00000504409 SVILO95425 2214 aa4.65□□□□□ -1.67
LINC02397-201ENST00000504409 KLKP1Q107X0 134 aa4.65□□□□□ -1.67
LINC02397-201ENST00000504409 BSPH1Q075Z2 132 aa4.65□□□□□ -1.67
LINC02397-201ENST00000504409 FAM168AQ92567 244 aa4.65□□□□□ -1.67
LINC02397-201ENST00000504409 MALRD1Q5VYJ5 2156 aa4.65□□□□□ -1.67
LINC02397-201ENST00000504409 MAP1BP46821 2468 aaKnown RBP4.64□□□□□ -1.67
LINC02397-201ENST00000504409 MED12Q93074 2177 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 IGKV2D-26A0A0A0MRZ7 120 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 LECT2O14960 151 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 CFHR3Q02985 330 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 Q8TAT8 98 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 HIGD2AQ9BW72 106 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 SPAARA0A1B0GVQ0 90 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 ELOF1P60002 83 aaKnown RBP4.64□□□□□ -1.67
LINC02397-201ENST00000504409 ARTNQ5T4W7 220 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 RPL37AP8A6NKH3 93 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 XCL1P47992 114 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 WFDC12Q8WWY7 111 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 PSMG3-AS1Q96PY0 264 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 XCL2Q9UBD3 114 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 IGHV3-64A0A075B6Q5 118 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 ZNF407Q9C0G0 2248 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 FREM1Q5H8C1 2179 aa4.64□□□□□ -1.67
LINC02397-201ENST00000504409 DEFB109BQ30KR1 87 aa4.63□□□□□ -1.67
LINC02397-201ENST00000504409 C14orf132Q9NPU4 83 aa4.63□□□□□ -1.67
LINC02397-201ENST00000504409 ATP5J2P56134 94 aa4.63□□□□□ -1.67
LINC02397-201ENST00000504409 MDS2Q8NDY4 140 aa4.63□□□□□ -1.67
LINC02397-201ENST00000504409 PRO0461Q9UI25 63 aa4.63□□□□□ -1.67
LINC02397-201ENST00000504409 LINC00310P59036 64 aa4.63□□□□□ -1.67
LINC02397-201ENST00000504409 IGFL3Q6UXB1 125 aa4.63□□□□□ -1.67
LINC02397-201ENST00000504409 HRCT1Q6UXD1 115 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms