RNA–Protein interactions for RNA: ENST00000504339.1

LINC02239-201, Transcript of long intergenic non-protein coding RNA 2239, humanhuman

TSL 1 (best) BASIC

Gene LINC02239, Length 2,290 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02239-201ENST00000504339 PHLDA3Q9Y5J5 127 aa6.7□□□□□ -1.34
LINC02239-201ENST00000504339 GAGE12BA1L429 117 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 FCER1GP30273 86 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 SPINK13Q1W4C9 94 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 TMEM61Q8N0U2 210 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 POM121L12Q8N7R1 296 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 RPL39LQ96EH5 51 aaKnown RBP6.69□□□□□ -1.34
LINC02239-201ENST00000504339 DKK2Q9UBU2 259 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 WNK1Q9H4A3 2382 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 IGHV3-16A0A0C4DH30 117 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 RBMY1BA6NDE4 496 aaKnown RBP6.69□□□□□ -1.34
LINC02239-201ENST00000504339 RBMY1EA6NEQ0 496 aaKnown RBP6.69□□□□□ -1.34
LINC02239-201ENST00000504339 KNCNA6PVL3 124 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 H3BRM9 83 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 SIVA1O15304 175 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 RBMY1DP0C7P1 496 aaKnown RBP6.69□□□□□ -1.34
LINC02239-201ENST00000504339 HSD52Q0P140 79 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 PCP2Q8IVA1 136 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 C11orf44Q8N8P7 122 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 TMEM158Q8WZ71 300 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 MRAP2Q96G30 205 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 C18orf15Q96N68 181 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 JMJD8Q96S16 334 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 FOXC2Q99958 501 aa6.69□□□□□ -1.34
LINC02239-201ENST00000504339 A6NDN8 102 aa6.68□□□□□ -1.34
LINC02239-201ENST00000504339 C9orf118A6NHY6 69 aa6.68□□□□□ -1.34
LINC02239-201ENST00000504339 CD7P09564 240 aa6.68□□□□□ -1.34
LINC02239-201ENST00000504339 NMUP48645 174 aa6.68□□□□□ -1.34
LINC02239-201ENST00000504339 UFSP1Q6NVU6 142 aa6.68□□□□□ -1.34
LINC02239-201ENST00000504339 FAM159AQ6UWV7 190 aa6.68□□□□□ -1.34
LINC02239-201ENST00000504339 SMIM15Q7Z3B0 74 aa6.68□□□□□ -1.34
LINC02239-201ENST00000504339 Q8N1Y9 231 aa6.68□□□□□ -1.34
LINC02239-201ENST00000504339 KLHL30-AS1Q8NEE0 82 aa6.68□□□□□ -1.34
LINC02239-201ENST00000504339 RAX2Q96IS3 184 aa6.68□□□□□ -1.34
LINC02239-201ENST00000504339 DPH3P1Q9H4G8 78 aa6.68□□□□□ -1.34
LINC02239-201ENST00000504339 GAGE10A6NGK3 116 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 A8MTW9 85 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 KHDC1LQ5JSQ8 128 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 FOXI2Q6ZQN5 318 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 C9orf85Q96MD7 179 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 SETXQ7Z333 2677 aaKnown RBP6.67□□□□□ -1.34
LINC02239-201ENST00000504339 H3BUT2 72 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 CD28P10747 220 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 DEFB131AP59861 70 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 DEFB114Q30KQ6 69 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 AP1S3Q96PC3 154 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 SMR3AQ99954 134 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 VPS25Q9BRG1 176 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 SMIM2Q9BVW6 85 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 YAE1D1Q9NRH1 226 aa6.67□□□□□ -1.34
LINC02239-201ENST00000504339 H3BMM0 161 aa6.66□□□□□ -1.34
LINC02239-201ENST00000504339 PRM2P04554 102 aa6.66□□□□□ -1.34
LINC02239-201ENST00000504339 SMIM17P0DL12 118 aa6.66□□□□□ -1.34
LINC02239-201ENST00000504339 FHL3Q13643 280 aa6.66□□□□□ -1.34
LINC02239-201ENST00000504339 ODF1Q14990 250 aa6.66□□□□□ -1.34
LINC02239-201ENST00000504339 NAA38Q9BRA0 125 aaKnown RBP6.66□□□□□ -1.34
LINC02239-201ENST00000504339 A0A087WWL8 130 aa6.66□□□□□ -1.34
LINC02239-201ENST00000504339 SUMO2P61956 95 aaKnown RBP6.66□□□□□ -1.34
LINC02239-201ENST00000504339 LAGE3Q14657 143 aa6.66□□□□□ -1.34
LINC02239-201ENST00000504339 CD300EQ496F6 205 aaPredicted RBP6.66□□□□□ -1.34
LINC02239-201ENST00000504339 GTF2H5Q6ZYL4 71 aa6.66□□□□□ -1.34
LINC02239-201ENST00000504339 LINC01006Q8NI28 216 aa6.66□□□□□ -1.34
LINC02239-201ENST00000504339 ZMAT4Q9H898 229 aa6.66□□□□□ -1.34
LINC02239-201ENST00000504339 ZNF256Q9Y2P7 627 aaPredicted RBP6.66□□□□□ -1.34
LINC02239-201ENST00000504339 IGHV1OR15-1A0A075B7D0 117 aa6.65□□□□□ -1.34
LINC02239-201ENST00000504339 IGKV2D-26A0A0A0MRZ7 120 aa6.65□□□□□ -1.34
LINC02239-201ENST00000504339 A0A1W2PRX2 142 aa6.65□□□□□ -1.34
LINC02239-201ENST00000504339 K7EP34 96 aa6.65□□□□□ -1.34
LINC02239-201ENST00000504339 MGPP08493 103 aa6.65□□□□□ -1.34
LINC02239-201ENST00000504339 HLA-DRB4P13762 266 aa6.65□□□□□ -1.34
LINC02239-201ENST00000504339 RAB37Q96AX2 223 aa6.65□□□□□ -1.34
LINC02239-201ENST00000504339 HHLA3Q9XRX5 114 aa6.65□□□□□ -1.34
LINC02239-201ENST00000504339 HLA-DRB4X5D2U9 266 aa6.65□□□□□ -1.34
LINC02239-201ENST00000504339 DUSP14O95147 198 aaKnown RBP6.65□□□□□ -1.35
LINC02239-201ENST00000504339 CRYGDP07320 174 aa6.65□□□□□ -1.35
LINC02239-201ENST00000504339 COTL1Q14019 142 aa6.65□□□□□ -1.35
LINC02239-201ENST00000504339 NEGR1Q7Z3B1 354 aa6.65□□□□□ -1.35
LINC02239-201ENST00000504339 TEX29Q8N6K0 151 aa6.65□□□□□ -1.35
LINC02239-201ENST00000504339 CITED2Q99967 270 aaPredicted RBP6.65□□□□□ -1.35
LINC02239-201ENST00000504339 C20orf78Q9BR46 151 aa6.65□□□□□ -1.35
LINC02239-201ENST00000504339 MAP6D1Q9H9H5 199 aa6.65□□□□□ -1.35
LINC02239-201ENST00000504339 PEMTQ9UBM1 199 aa6.65□□□□□ -1.35
LINC02239-201ENST00000504339 TRAV2A0A0B4J234 112 aa6.64□□□□□ -1.35
LINC02239-201ENST00000504339 K7ERU9 68 aa6.64□□□□□ -1.35
LINC02239-201ENST00000504339 PRSS1P07477 247 aa6.64□□□□□ -1.35
LINC02239-201ENST00000504339 RNASE1P07998 156 aaKnown RBP6.64□□□□□ -1.35
LINC02239-201ENST00000504339 SUMO4Q6EEV6 95 aa6.64□□□□□ -1.35
LINC02239-201ENST00000504339 MORN3Q6PF18 240 aaPredicted RBP6.64□□□□□ -1.35
LINC02239-201ENST00000504339 JMJD1CQ15652 2540 aa6.64□□□□□ -1.35
LINC02239-201ENST00000504339 SAP30O75446 220 aa6.64□□□□□ -1.35
LINC02239-201ENST00000504339 IGKCP01834 107 aa6.64□□□□□ -1.35
LINC02239-201ENST00000504339 DEFB104AQ8WTQ1 72 aa6.64□□□□□ -1.35
LINC02239-201ENST00000504339 TTTY13Q9BZ97 58 aa6.64□□□□□ -1.35
LINC02239-201ENST00000504339 A0A1W2PPM0 123 aa6.63□□□□□ -1.35
LINC02239-201ENST00000504339 CCL24O00175 119 aa6.63□□□□□ -1.35
LINC02239-201ENST00000504339 POLR2KP53803 58 aaKnown RBP6.63□□□□□ -1.35
LINC02239-201ENST00000504339 ODF3L2Q3SX64 289 aa6.63□□□□□ -1.35
LINC02239-201ENST00000504339 C16orf95Q9H693 158 aa6.63□□□□□ -1.35
LINC02239-201ENST00000504339 HIVEP2P31629 2446 aa6.63□□□□□ -1.35
LINC02239-201ENST00000504339 ADARB2-AS1A8MUL3 147 aa6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms