RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 BAGE2Q86Y30 109 aa9.52□□□□□ -0.89
PDLIM7-211ENST00000504318 NAGKQ9UJ70 344 aa9.52□□□□□ -0.89
PDLIM7-211ENST00000504318 LOC100131303A0A0U1RQF7 123 aa9.51□□□□□ -0.89
PDLIM7-211ENST00000504318 COLCA2A8K830 154 aa9.51□□□□□ -0.89
PDLIM7-211ENST00000504318 GCGP01275 180 aa9.51□□□□□ -0.89
PDLIM7-211ENST00000504318 RNASE3P12724 160 aaKnown RBP9.51□□□□□ -0.89
PDLIM7-211ENST00000504318 GATA1P15976 413 aaPredicted RBP9.51□□□□□ -0.89
PDLIM7-211ENST00000504318 FLI1Q01543 452 aaPredicted RBP9.51□□□□□ -0.89
PDLIM7-211ENST00000504318 NEGR1Q7Z3B1 354 aa9.51□□□□□ -0.89
PDLIM7-211ENST00000504318 OR10G8Q8NGN5 311 aa9.51□□□□□ -0.89
PDLIM7-211ENST00000504318 LINC00479Q96M42 142 aa9.51□□□□□ -0.89
PDLIM7-211ENST00000504318 TMA7Q9Y2S6 64 aaKnown RBP9.51□□□□□ -0.89
PDLIM7-211ENST00000504318 TRGV4A0A0C4DH28 118 aa9.5□□□□□ -0.89
PDLIM7-211ENST00000504318 C16orf90A8MZG2 172 aa9.5□□□□□ -0.89
PDLIM7-211ENST00000504318 LTAP01374 205 aa9.5□□□□□ -0.89
PDLIM7-211ENST00000504318 PFN1P07737 140 aaKnown RBP9.5□□□□□ -0.89
PDLIM7-211ENST00000504318 GYPEP15421 78 aa9.5□□□□□ -0.89
PDLIM7-211ENST00000504318 ERVFC1-1P60608 527 aa9.5□□□□□ -0.89
PDLIM7-211ENST00000504318 PTH2Q96A98 100 aa9.5□□□□□ -0.89
PDLIM7-211ENST00000504318 KCNS1Q96KK3 526 aa9.5□□□□□ -0.89
PDLIM7-211ENST00000504318 OSTCQ9NRP0 149 aa9.5□□□□□ -0.89
PDLIM7-211ENST00000504318 TNFRSF18Q9Y5U5 241 aa9.5□□□□□ -0.89
PDLIM7-211ENST00000504318 TRBV24-1A0A075B6N3 115 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 TRAV9-1A0A075B6T8 112 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 IGKV3D-20A0A0C4DH25 116 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 PGPEP1LA6NFU8 196 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 K7EN84 100 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 RS1O15537 224 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 CDK2AP2O75956 126 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 MGST1P10620 155 aaKnown RBP9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 RAB5AP20339 215 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 ELOBQ15370 118 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 CFAP126Q5VTH2 177 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 SPATA12Q7Z6I5 190 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 Q86TA4 180 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 WFDC10BQ8IUB3 73 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 YPEL4Q96NS1 127 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 ZFP30Q9Y2G7 519 aa9.49□□□□□ -0.89
PDLIM7-211ENST00000504318 TRAV34A0A0B4J273 112 aa9.48□□□□□ -0.89
PDLIM7-211ENST00000504318 IGLV2-8P01709 118 aa9.48□□□□□ -0.89
PDLIM7-211ENST00000504318 ORM1P02763 201 aa9.48□□□□□ -0.89
PDLIM7-211ENST00000504318 RPL19P84098 196 aaKnown RBP9.48□□□□□ -0.89
PDLIM7-211ENST00000504318 FAM231DQ6ZW35 169 aa9.48□□□□□ -0.89
PDLIM7-211ENST00000504318 COX8CQ7Z4L0 72 aa9.48□□□□□ -0.89
PDLIM7-211ENST00000504318 PRNTQ86SH4 94 aa9.48□□□□□ -0.89
PDLIM7-211ENST00000504318 OR4C5Q8NGB2 326 aa9.48□□□□□ -0.89
PDLIM7-211ENST00000504318 URGCP-MRPS24S4R325 110 aa9.48□□□□□ -0.89
PDLIM7-211ENST00000504318 DNAH10OSP0CZ25 163 aa9.47□□□□□ -0.89
PDLIM7-211ENST00000504318 SRIP30626 198 aa9.47□□□□□ -0.89
PDLIM7-211ENST00000504318 CRIP1P50238 77 aa9.47□□□□□ -0.89
PDLIM7-211ENST00000504318 TIRAPP58753 221 aa9.47□□□□□ -0.89
PDLIM7-211ENST00000504318 SMUG1Q53HV7 270 aa9.47□□□□□ -0.89
PDLIM7-211ENST00000504318 NDFIP1Q9BT67 221 aa9.47□□□□□ -0.89
PDLIM7-211ENST00000504318 LINC00694P0DN24 101 aa9.46□□□□□ -0.9
PDLIM7-211ENST00000504318 ZNF876PQ49A33 203 aa9.46□□□□□ -0.9
PDLIM7-211ENST00000504318 SAPCD1Q5SSQ6 148 aa9.46□□□□□ -0.9
PDLIM7-211ENST00000504318 UFSP1Q6NVU6 142 aa9.46□□□□□ -0.9
PDLIM7-211ENST00000504318 SLC25A29Q8N8R3 303 aa9.46□□□□□ -0.9
PDLIM7-211ENST00000504318 MLST8Q9BVC4 326 aa9.46□□□□□ -0.9
PDLIM7-211ENST00000504318 IL36BQ9NZH7 164 aa9.46□□□□□ -0.9
PDLIM7-211ENST00000504318 C1orf196B1AJZ1 125 aa9.45□□□□□ -0.9
PDLIM7-211ENST00000504318 RAB5BP61020 215 aa9.45□□□□□ -0.9
PDLIM7-211ENST00000504318 DAZAP1Q96EP5 407 aaKnown RBP9.45□□□□□ -0.9
PDLIM7-211ENST00000504318 TGIF2-C20orf24A0A0A6YYL0 155 aa9.44□□□□□ -0.9
PDLIM7-211ENST00000504318 GATCO43716 136 aaKnown RBP9.44□□□□□ -0.9
PDLIM7-211ENST00000504318 CT83Q5H943 113 aa9.44□□□□□ -0.9
PDLIM7-211ENST00000504318 DNLZQ5SXM8 178 aa9.44□□□□□ -0.9
PDLIM7-211ENST00000504318 Q6ZSN1 163 aa9.44□□□□□ -0.9
PDLIM7-211ENST00000504318 NHLRC2Q8NBF2 726 aa9.44□□□□□ -0.9
PDLIM7-211ENST00000504318 ZC2HC1AQ96GY0 325 aa9.44□□□□□ -0.9
PDLIM7-211ENST00000504318 V9GYV3 84 aa9.44□□□□□ -0.9
PDLIM7-211ENST00000504318 TRBV6-4A0A1B0GX49 114 aa9.43□□□□□ -0.9
PDLIM7-211ENST00000504318 K7EP13 123 aa9.43□□□□□ -0.9
PDLIM7-211ENST00000504318 CIDEAO60543 219 aa9.43□□□□□ -0.9
PDLIM7-211ENST00000504318 P01737 135 aa9.43□□□□□ -0.9
PDLIM7-211ENST00000504318 CXCL1P09341 107 aa9.43□□□□□ -0.9
PDLIM7-211ENST00000504318 RPS10P46783 165 aaKnown RBP9.43□□□□□ -0.9
PDLIM7-211ENST00000504318 PIK3CD-AS1Q5SR53 167 aa9.43□□□□□ -0.9
PDLIM7-211ENST00000504318 PRR27Q6MZM9 219 aa9.43□□□□□ -0.9
PDLIM7-211ENST00000504318 RNASE7Q9H1E1 156 aaKnown RBP9.43□□□□□ -0.9
PDLIM7-211ENST00000504318 FUSP35637 526 aaKnown RBP eCLIP9.42□□□□□ -0.9
PDLIM7-211ENST00000504318 RPP21Q9H633 154 aaKnown RBP9.42□□□□□ -0.9
PDLIM7-211ENST00000504318 Q9UF83 564 aa9.42□□□□□ -0.9
PDLIM7-211ENST00000504318 IGHV3-73A0A0B4J1V6 119 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 SMIM27A0A1W2PRY6 76 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 C19orf71A6NCJ1 209 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 FABP5P3A8MUU1 101 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 A8MWL6 223 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 COX19Q49B96 90 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 LINC01556Q5JQF7 62 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 SH2D6Q7Z4S9 175 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 NUDT10Q8NFP7 164 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 NUDT11Q96G61 164 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 JPT2Q9H910 190 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 SCRT2Q9NQ03 307 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 MSRB1Q9NZV6 116 aa9.41□□□□□ -0.9
PDLIM7-211ENST00000504318 A0A087WTM6 91 aa9.4□□□□□ -0.9
PDLIM7-211ENST00000504318 FAM231BA6NCW3 169 aa9.4□□□□□ -0.9
PDLIM7-211ENST00000504318 SH2D1AO60880 128 aa9.4□□□□□ -0.9
PDLIM7-211ENST00000504318 RHOHQ15669 191 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 166.8 ms