RNA–Protein interactions for RNA: ENST00000504178.1

SYNPO2-205, Transcript of synaptopodin 2, humanhuman

TSL 1 (best)

Gene SYNPO2, Length 6,779 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-205ENST00000504178 IGLV1-47P01700 117 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 LINC00173Q6ZV60 143 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 C11orf45Q8TAV5 145 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 GTSF1Q8WW33 167 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 FAM167A-AS1Q96KT0 104 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 COL4A4P53420 1690 aaPredicted RBP5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 C19orf84I3L1E1 186 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 ACYP1P07311 99 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 Q6ZVH6 145 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 E7EUB6 86 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 PLA2G5P39877 138 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 B9D2Q9BPU9 175 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 ADAMTS9Q9P2N4 1935 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 FBXL19-AS1Q494R0 122 aa5.49□□□□□ -1.53
SYNPO2-205ENST00000504178 DIRC1Q969H9 104 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 TMEM61Q8N0U2 210 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 MDFICQ9P1T7 246 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 OBSL1O75147 1896 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 A0A0J9YX75 114 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 C11orf86A6NJI1 115 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 CCL25O15444 150 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 KIAA1549LQ6ZVL6 1849 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 Q6YL49 198 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 A0A0B4J2C4 111 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 A4D1N5 150 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 ODF3BA8MYP8 253 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 TNFRSF13BO14836 293 aaPredicted RBP5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 TMEM258P61165 79 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 NREPQ16612 68 aa5.48□□□□□ -1.53
SYNPO2-205ENST00000504178 CTRLP40313 264 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 RBM3P98179 157 aaKnown RBP5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 TRBV6-1A0A0K0K1D8 114 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 C14orf177Q52M58 125 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 WFDC11Q8NEX6 87 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 PRO0255Q9UI72 69 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 C2orf16Q68DN1 1984 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 WISP2O76076 250 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 MSMPQ1L6U9 139 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 WFDC9Q8NEX5 89 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 CCDC140Q96MF4 163 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 C5orf47Q569G3 176 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 NFE4Q86UQ8 179 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 ESPL1Q14674 2120 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 LTBP2Q14767 1821 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 HIGD2BQ4VC39 106 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 TP53TG3Q9ULZ0 132 aa5.47□□□□□ -1.53
SYNPO2-205ENST00000504178 SDK2Q58EX2 2172 aa5.46□□□□□ -1.53
SYNPO2-205ENST00000504178 RP1L1Q8IWN7 2480 aaPredicted RBP5.46□□□□□ -1.54
SYNPO2-205ENST00000504178 TNRC6BQ9UPQ9 1833 aaKnown RBP5.46□□□□□ -1.54
SYNPO2-205ENST00000504178 IGKV3D-7A0A0C4DH55 119 aa5.46□□□□□ -1.54
SYNPO2-205ENST00000504178 MP68P56378 58 aa5.46□□□□□ -1.54
SYNPO2-205ENST00000504178 INAFM1C9JVW0 142 aa5.46□□□□□ -1.54
SYNPO2-205ENST00000504178 ANKRD39Q53RE8 183 aa5.46□□□□□ -1.54
SYNPO2-205ENST00000504178 RNF183Q96D59 192 aa5.46□□□□□ -1.54
SYNPO2-205ENST00000504178 PRB2P02812 416 aaPredicted RBP5.46□□□□□ -1.54
SYNPO2-205ENST00000504178 HILS1P60008 231 aa5.46□□□□□ -1.54
SYNPO2-205ENST00000504178 TRAV26-1A0A087WT03 109 aa5.46□□□□□ -1.54
SYNPO2-205ENST00000504178 LGALS9O00182 355 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 MIR7-3HGQ8N6C7 128 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 PLA2G2EQ9NZK7 142 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 IGHV1-58A0A0C4DH39 117 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 A0A1B0GX51 115 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 NUPR1O60356 82 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 CLEC2BQ92478 149 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 COX7BP24311 80 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 PSMB8P28062 276 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 DNAJC13O75165 2243 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 E9PLD3 99 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 LECT2O14960 151 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 Q6ZUT4 128 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 CITED1Q99966 193 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 ZNF106Q9H2Y7 1883 aaKnown RBP5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 P0DMU3 169 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 FAM231AP0DMU4 169 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 FAM231CP0DMU5 169 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 CDPF1Q6NVV7 123 aa5.45□□□□□ -1.54
SYNPO2-205ENST00000504178 H0Y9J4 135 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 PI4KAP42356 2102 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 KIAA2026Q5HYC2 2103 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 COL4A3Q01955 1670 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 IGKV2-24A0A0C4DH68 120 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 LINC01548A6NM66 108 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 CRYGDP07320 174 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 LMO4P61968 165 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 C14orf132Q9NPU4 83 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 HEATR5AQ86XA9 2040 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 NOTCH4Q99466 2003 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 LINC01620Q4KN68 170 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 LYRM9A8MSI8 78 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 REG3AQ06141 175 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 CEMP1Q6PRD7 247 aaPredicted RBP5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 LINC00269Q8N2A0 174 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 ZFAND2AQ8N6M9 145 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 KIR2DL5BA0A0G2JN68 375 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 KIR2DL5BA0A0G2JPC4 375 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 KIR2DL5AQ8N109 375 aa5.44□□□□□ -1.54
SYNPO2-205ENST00000504178 ODF3Q96PU9 254 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 Q6ZTI0 123 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 LYPD6Q86Y78 171 aa5.43□□□□□ -1.54
SYNPO2-205ENST00000504178 IGKV1D-37A0A075B6S9 117 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 77.1 ms