RNA–Protein interactions for RNA: ENST00000504157.5

POLR2J3-209, Transcript of RNA polymerase II subunit J3, human

TSL 2

Gene POLR2J3, Length 2,211 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLR2J3-209	ENST00000504157		Q1RN00	199 aa		13.48	□□□□□ -0.25
POLR2J3-209	ENST00000504157		Q8N6K4	173 aa		13.48	□□□□□ -0.25
POLR2J3-209	ENST00000504157	LENEP	Q9Y5L5	61 aa		13.48	□□□□□ -0.25
POLR2J3-209	ENST00000504157	MGA	Q8IWI9	3026 aa		13.48	□□□□□ -0.25
POLR2J3-209	ENST00000504157		B9A039	149 aa		13.48	□□□□□ -0.25
POLR2J3-209	ENST00000504157	MUSTN1	Q8IVN3	82 aa		13.48	□□□□□ -0.25
POLR2J3-209	ENST00000504157	LRRC75A-AS1	Q8N1F1	130 aa		13.48	□□□□□ -0.25
POLR2J3-209	ENST00000504157	C3orf22	Q8N5N4	141 aa		13.48	□□□□□ -0.25
POLR2J3-209	ENST00000504157	DPH3P1	Q9H4G8	78 aa		13.48	□□□□□ -0.25
POLR2J3-209	ENST00000504157	TRIAP1	O43715	76 aa		13.47	□□□□□ -0.25
POLR2J3-209	ENST00000504157	PPP1R17	O96001	155 aa		13.47	□□□□□ -0.25
POLR2J3-209	ENST00000504157	TMEM170B	Q5T4T1	132 aa		13.47	□□□□□ -0.25
POLR2J3-209	ENST00000504157	TMEM141	Q96I45	108 aa		13.47	□□□□□ -0.25
POLR2J3-209	ENST00000504157	CLPSL1	A2RUU4	121 aa		13.46	□□□□□ -0.25
POLR2J3-209	ENST00000504157	C9orf153	Q5TBE3	101 aa		13.46	□□□□□ -0.25
POLR2J3-209	ENST00000504157	ZNRF2	Q8NHG8	242 aa		13.46	□□□□□ -0.25
POLR2J3-209	ENST00000504157	CHD8	Q9HCK8	2581 aa		13.46	□□□□□ -0.25
POLR2J3-209	ENST00000504157	ZZEF1	O43149	2961 aa		13.46	□□□□□ -0.26
POLR2J3-209	ENST00000504157	FAM236A	A0A1B0GUQ0	79 aa		13.45	□□□□□ -0.26
POLR2J3-209	ENST00000504157	FAM236B	A0A1B0GV22	79 aa		13.45	□□□□□ -0.26
POLR2J3-209	ENST00000504157		A0A1B0GX51	115 aa		13.45	□□□□□ -0.26
POLR2J3-209	ENST00000504157	SMIM9	A6NGZ8	99 aa		13.45	□□□□□ -0.26
POLR2J3-209	ENST00000504157	NPFF	O15130	113 aa		13.45	□□□□□ -0.26
POLR2J3-209	ENST00000504157	UQCRQ	O14949	82 aa		13.45	□□□□□ -0.26
POLR2J3-209	ENST00000504157	CD3E	P07766	207 aa		13.45	□□□□□ -0.26
POLR2J3-209	ENST00000504157	MED14OS	P0DP75	135 aa		13.45	□□□□□ -0.26
POLR2J3-209	ENST00000504157	ZNF876P	Q49A33	203 aa		13.45	□□□□□ -0.26
POLR2J3-209	ENST00000504157	GPHB5	Q86YW7	130 aa		13.45	□□□□□ -0.26
POLR2J3-209	ENST00000504157	TRGV11	A0A075B6L2	103 aa		13.44	□□□□□ -0.26
POLR2J3-209	ENST00000504157		M0R1W7	72 aa		13.44	□□□□□ -0.26
POLR2J3-209	ENST00000504157	DUX3	Q96PT4	197 aa		13.44	□□□□□ -0.26
POLR2J3-209	ENST00000504157	BEX4	Q9NWD9	120 aa	Predicted RBP	13.44	□□□□□ -0.26
POLR2J3-209	ENST00000504157	TP53TG1	Q9Y2A0	90 aa		13.44	□□□□□ -0.26
POLR2J3-209	ENST00000504157	LOC107984640	A0A0U1RRK4	108 aa		13.44	□□□□□ -0.26
POLR2J3-209	ENST00000504157		J3KT08	172 aa		13.44	□□□□□ -0.26
POLR2J3-209	ENST00000504157	WIPF1	O43516	503 aa		13.44	□□□□□ -0.26
POLR2J3-209	ENST00000504157	FAM110D	Q8TAY7	271 aa	Predicted RBP	13.44	□□□□□ -0.26
POLR2J3-209	ENST00000504157	TIMM17A	Q99595	171 aa		13.44	□□□□□ -0.26
POLR2J3-209	ENST00000504157	IGHV3OR16-8	A0A075B7F1	116 aa		13.43	□□□□□ -0.26
POLR2J3-209	ENST00000504157	OOSP1	A8MZH6	123 aa		13.43	□□□□□ -0.26
POLR2J3-209	ENST00000504157	LEPROT	O15243	131 aa		13.43	□□□□□ -0.26
POLR2J3-209	ENST00000504157	LINC00526	Q96FQ7	95 aa		13.43	□□□□□ -0.26
POLR2J3-209	ENST00000504157	ANKRD11	Q6UB99	2663 aa	Predicted RBP	13.43	□□□□□ -0.26
POLR2J3-209	ENST00000504157	HERVK_113	P63121	156 aa		13.43	□□□□□ -0.26
POLR2J3-209	ENST00000504157	METTL26	Q96S19	204 aa		13.43	□□□□□ -0.26
POLR2J3-209	ENST00000504157	IGHV7-81	A0A0B4J1V7	117 aa		13.42	□□□□□ -0.26
POLR2J3-209	ENST00000504157	TMEM223	A0PJW6	202 aa		13.42	□□□□□ -0.26
POLR2J3-209	ENST00000504157	LYNX1	G3V0Z9	82 aa		13.42	□□□□□ -0.26
POLR2J3-209	ENST00000504157	LYNX1	P0DP58	116 aa		13.42	□□□□□ -0.26
POLR2J3-209	ENST00000504157	SMG1	Q96Q15	3661 aa	Known RBP	13.42	□□□□□ -0.26
POLR2J3-209	ENST00000504157		A0A0J9YX75	114 aa		13.41	□□□□□ -0.26
POLR2J3-209	ENST00000504157		U3KQE9	123 aa		13.41	□□□□□ -0.26
POLR2J3-209	ENST00000504157	IGHV3-35	A0A0C4DH35	117 aa		13.41	□□□□□ -0.26
POLR2J3-209	ENST00000504157	ACYP1	P07311	99 aa		13.41	□□□□□ -0.26
POLR2J3-209	ENST00000504157	C15orf32	Q32M92	178 aa		13.41	□□□□□ -0.26
POLR2J3-209	ENST00000504157	PRR9	Q5T870	116 aa		13.41	□□□□□ -0.26
POLR2J3-209	ENST00000504157	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	13.41	□□□□□ -0.26
POLR2J3-209	ENST00000504157	SPANXC	Q9NY87	97 aa		13.41	□□□□□ -0.26
POLR2J3-209	ENST00000504157	ATP5G1	P05496	136 aa		13.4	□□□□□ -0.26
POLR2J3-209	ENST00000504157	ICOS	Q9Y6W8	199 aa		13.4	□□□□□ -0.26
POLR2J3-209	ENST00000504157	BOD1L1	Q8NFC6	3051 aa		13.4	□□□□□ -0.26
POLR2J3-209	ENST00000504157	MGP	P08493	103 aa		13.4	□□□□□ -0.26
POLR2J3-209	ENST00000504157	ZNF22	P17026	224 aa	Predicted RBP	13.4	□□□□□ -0.26
POLR2J3-209	ENST00000504157	CEMP1	Q6PRD7	247 aa	Predicted RBP	13.4	□□□□□ -0.26
POLR2J3-209	ENST00000504157	ATM	Q13315	3056 aa		13.4	□□□□□ -0.26
POLR2J3-209	ENST00000504157	SDHAF1	A6NFY7	115 aa		13.39	□□□□□ -0.27
POLR2J3-209	ENST00000504157		K7ENP7	123 aa		13.39	□□□□□ -0.27
POLR2J3-209	ENST00000504157	RPS28	P62857	69 aa	Known RBP	13.39	□□□□□ -0.27
POLR2J3-209	ENST00000504157	PTPRQ	Q9UMZ3	2332 aa		13.39	□□□□□ -0.27
POLR2J3-209	ENST00000504157	TRAV21	A0A0B4J279	112 aa		13.39	□□□□□ -0.27
POLR2J3-209	ENST00000504157	COX6C	P09669	75 aa		13.39	□□□□□ -0.27
POLR2J3-209	ENST00000504157	ITLN2	Q8WWU7	325 aa	Predicted RBP	13.39	□□□□□ -0.27
POLR2J3-209	ENST00000504157	RPL39	P62891	51 aa	Known RBP	13.38	□□□□□ -0.27
POLR2J3-209	ENST00000504157	C9orf139	Q6ZV77	190 aa		13.38	□□□□□ -0.27
POLR2J3-209	ENST00000504157	LINC00477	Q96M19	166 aa		13.38	□□□□□ -0.27
POLR2J3-209	ENST00000504157	IGHV4OR15-8	A0A075B7B6	117 aa		13.37	□□□□□ -0.27
POLR2J3-209	ENST00000504157		A0A087WW49	117 aa		13.37	□□□□□ -0.27
POLR2J3-209	ENST00000504157	IGHV3-66	A0A0C4DH42	116 aa		13.37	□□□□□ -0.27
POLR2J3-209	ENST00000504157	NXPH4	O95158	308 aa		13.37	□□□□□ -0.27
POLR2J3-209	ENST00000504157	ZFAND2A	Q8N6M9	145 aa		13.37	□□□□□ -0.27
POLR2J3-209	ENST00000504157	CCDC140	Q96MF4	163 aa		13.37	□□□□□ -0.27
POLR2J3-209	ENST00000504157	LST1	O00453	97 aa		13.37	□□□□□ -0.27
POLR2J3-209	ENST00000504157	UBE2E1	P51965	193 aa		13.37	□□□□□ -0.27
POLR2J3-209	ENST00000504157	POLR2K	P53803	58 aa	Known RBP	13.37	□□□□□ -0.27
POLR2J3-209	ENST00000504157	MINOS1	Q5TGZ0	78 aa		13.37	□□□□□ -0.27
POLR2J3-209	ENST00000504157	PHLDA3	Q9Y5J5	127 aa		13.37	□□□□□ -0.27
POLR2J3-209	ENST00000504157	MINOS1-NBL1	R4GNA1	71 aa		13.37	□□□□□ -0.27
POLR2J3-209	ENST00000504157	TRAV25	A0A0B4J276	109 aa		13.36	□□□□□ -0.27
POLR2J3-209	ENST00000504157	SPRY2	O43597	315 aa		13.36	□□□□□ -0.27
POLR2J3-209	ENST00000504157		Q8N9W7	124 aa		13.36	□□□□□ -0.27
POLR2J3-209	ENST00000504157	S100A4	P26447	101 aa	Known RBP	13.36	□□□□□ -0.27
POLR2J3-209	ENST00000504157	VMO1	Q7Z5L0	202 aa		13.36	□□□□□ -0.27
POLR2J3-209	ENST00000504157	UCN	P55089	124 aa		13.35	□□□□□ -0.27
POLR2J3-209	ENST00000504157	LINC00643	Q86TS7	51 aa		13.35	□□□□□ -0.27
POLR2J3-209	ENST00000504157		A0A0J9YXY3	114 aa		13.35	□□□□□ -0.27
POLR2J3-209	ENST00000504157	ROS1	P08922	2347 aa		13.35	□□□□□ -0.27
POLR2J3-209	ENST00000504157	TMEM219	Q86XT9	240 aa		13.35	□□□□□ -0.27
POLR2J3-209	ENST00000504157	C16orf92	Q96LL3	132 aa		13.35	□□□□□ -0.27
POLR2J3-209	ENST00000504157	TRBV7-1	A0A0A6YYK4	115 aa		13.34	□□□□□ -0.27
POLR2J3-209	ENST00000504157	VCY	O14598	125 aa		13.34	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms