RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 CCL4L1Q8NHW4 92 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 MRPL53Q96EL3 112 aaKnown RBP2.15□□□□□ -2.07
NEDD4-204ENST00000503468 NDUFA4L2Q9NRX3 87 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 PEMTQ9UBM1 199 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 MGAM2Q2M2H8 2515 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 NBEAL2Q6ZNJ1 2754 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 CGB1A6NKQ9 187 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 RFESDQ8TAC1 157 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 SACSQ9NZJ4 4579 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 FASNP49327 2511 aaKnown RBP2.15□□□□□ -2.07
NEDD4-204ENST00000503468 FAM236AA0A1B0GUQ0 79 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 FAM236BA0A1B0GV22 79 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 H3BVH4 76 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 DNAL4O96015 105 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 SUMO2P61956 95 aaKnown RBP2.15□□□□□ -2.07
NEDD4-204ENST00000503468 TMEM86BQ8N661 226 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 SHANK2-AS3Q9BTD1 123 aa2.15□□□□□ -2.07
NEDD4-204ENST00000503468 A0A0J9YY99 117 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 PSPNO60542 156 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 GATA3P23771 443 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 TIRAPP58753 221 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 LYZL1Q6UWQ5 148 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 C20orf204Q6ZNR8 217 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 FAM19A5Q7Z5A7 132 aaPredicted RBP2.14□□□□□ -2.07
NEDD4-204ENST00000503468 KIR2DL5BQ8NHK3 375 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 RBAKDNA6NC62 111 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 BUB3O43684 328 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 TIMM17BO60830 172 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 GLRXP35754 106 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 ZNF138P52744 262 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 GFERP55789 205 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 ATP5J2P56134 94 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 PRIMA1Q86XR5 153 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 PATE1Q8WXA2 126 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 DKK2Q9UBU2 259 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 USP34Q70CQ2 3546 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 COL6A5A8TX70 2615 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 IGHV4OR15-8A0A075B7B6 117 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 A0A087WW49 117 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 TRBV10-3A0A0K0K1G6 114 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 SCRG1O75711 98 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 IGHG2P01859 326 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 SPRNQ5BIV9 151 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 C2orf66Q6UXQ4 117 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 PRNTQ86SH4 94 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 IGKV1OR2-108A0A075B7D4 117 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 IGKV2D-26A0A0A0MRZ7 120 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 TRAV40A0A0B4J280 105 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 TINCRA0A1B0GVN0 87 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 C5orf63A6NC05 138 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 CCDC179H3BU77 68 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 MALP21145 153 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 INSL3P51460 131 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 SYNJ2BPP57105 145 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 NPC2P61916 151 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 WFDC9Q8NEX5 89 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 V9GYY9 64 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 C11orf86A6NJI1 115 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 J3QQQ9 107 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 WT1P19544 449 aaPredicted RBP2.14□□□□□ -2.07
NEDD4-204ENST00000503468 PPIFP30405 207 aaKnown RBP2.14□□□□□ -2.07
NEDD4-204ENST00000503468 SPANXN1Q5VSR9 72 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 C21orf62Q9NYP8 219 aa2.14□□□□□ -2.07
NEDD4-204ENST00000503468 DEFB108AA8MXU0 73 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 VCYO14598 125 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 S100A4P26447 101 aaKnown RBP2.13□□□□□ -2.07
NEDD4-204ENST00000503468 SMCPP49901 116 aaPredicted RBP2.13□□□□□ -2.07
NEDD4-204ENST00000503468 RPL18AQ02543 176 aaKnown RBP2.13□□□□□ -2.07
NEDD4-204ENST00000503468 RHOHQ15669 191 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 TMEM200BQ69YZ2 307 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 PATE2Q6UY27 113 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 Q6ZS52 159 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 WDR86Q86TI4 376 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 DPH3P1Q9H4G8 78 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 K7ERJ3 54 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 LST1O00453 97 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 ID1P41134 155 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 ZNF56Q15929 161 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 IL17RELQ6ZVW7 336 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 NFE4Q86UQ8 179 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 MDP1Q86V88 176 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 RNF182Q8N6D2 247 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 RNF125Q96EQ8 232 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 ODF3Q96PU9 254 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 H0YGX0 51 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 PRRG2O14669 202 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 TIMM8AO60220 97 aaPredicted RBP2.13□□□□□ -2.07
NEDD4-204ENST00000503468 TCL1BO95988 128 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 Q6ZR03 302 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 FAM216BQ8N7L0 139 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 NPBQ8NG41 125 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 TRAV13-1A0A0B4J241 112 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 H3BUA1 57 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 SAA1P0DJI8 122 aaPredicted RBP2.13□□□□□ -2.07
NEDD4-204ENST00000503468 LINC01587Q99440 93 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 C1orf43Q9BWL3 253 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 DNAH11Q96DT5 4516 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 KNCNA6PVL3 124 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 PRSS2P07478 247 aa2.13□□□□□ -2.07
NEDD4-204ENST00000503468 GRPP07492 148 aa2.13□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms