RNA–Protein interactions for RNA: ENST00000502221.2

AC055717.1-201, humanhuman

TSL 1 (best) BASIC

Gene AC055717.1, Length 1,986 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC055717.1-201ENST00000502221 ONECUT1Q9UBC0 465 aa8.41□□□□□ -1.06
AC055717.1-201ENST00000502221 ANKRD17O75179 2603 aaKnown RBP8.4□□□□□ -1.06
AC055717.1-201ENST00000502221 BUB3O43684 328 aa8.4□□□□□ -1.06
AC055717.1-201ENST00000502221 TIMM17AQ99595 171 aa8.4□□□□□ -1.06
AC055717.1-201ENST00000502221 AGRNO00468 2067 aa8.4□□□□□ -1.07
AC055717.1-201ENST00000502221 TRAV8-4A0A0B4J246 113 aa8.39□□□□□ -1.07
AC055717.1-201ENST00000502221 FAM240AA0A1B0GVK7 77 aa8.39□□□□□ -1.07
AC055717.1-201ENST00000502221 GATA3P23771 443 aa8.39□□□□□ -1.07
AC055717.1-201ENST00000502221 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.39□□□□□ -1.07
AC055717.1-201ENST00000502221 LINC01560Q8TB33 94 aa8.39□□□□□ -1.07
AC055717.1-201ENST00000502221 PLEKHB2Q96CS7 222 aa8.39□□□□□ -1.07
AC055717.1-201ENST00000502221 HIVEP1P15822 2718 aa8.39□□□□□ -1.07
AC055717.1-201ENST00000502221 CCDC168Q8NDH2 2452 aa8.39□□□□□ -1.07
AC055717.1-201ENST00000502221 PRRC2AP48634 2157 aaKnown RBP8.39□□□□□ -1.07
AC055717.1-201ENST00000502221 LINC00477Q96M19 166 aa8.39□□□□□ -1.07
AC055717.1-201ENST00000502221 HRNRQ86YZ3 2850 aaPredicted RBP8.38□□□□□ -1.07
AC055717.1-201ENST00000502221 TRAV26-2A0A0B4J265 109 aa8.38□□□□□ -1.07
AC055717.1-201ENST00000502221 TRAV21A0A0B4J279 112 aa8.38□□□□□ -1.07
AC055717.1-201ENST00000502221 A0A0J9YX75 114 aa8.38□□□□□ -1.07
AC055717.1-201ENST00000502221 C9JAW5 83 aa8.38□□□□□ -1.07
AC055717.1-201ENST00000502221 LGALS3P17931 250 aaKnown RBP8.38□□□□□ -1.07
AC055717.1-201ENST00000502221 COX7A1P24310 79 aa8.38□□□□□ -1.07
AC055717.1-201ENST00000502221 FBXL19-AS1Q494R0 122 aa8.38□□□□□ -1.07
AC055717.1-201ENST00000502221 C11orf21Q9P2W6 132 aa8.38□□□□□ -1.07
AC055717.1-201ENST00000502221 IGHV4OR15-8A0A075B7B6 117 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 A0A087WW49 117 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 TRBV10-2A0A0K0K1G8 114 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 LY6G5BQ8NDX9 201 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 TRBV30A0A0K0K1B3 111 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 B9A039 149 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 PRAC2D3DTV9 90 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 M0R1W7 72 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 IGHV3-33P01772 117 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 BSPH1Q075Z2 132 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 Q8N1Y9 231 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 KLK15Q9H2R5 256 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 AKAP6Q13023 2319 aa8.37□□□□□ -1.07
AC055717.1-201ENST00000502221 H3BT86 120 aa8.36□□□□□ -1.07
AC055717.1-201ENST00000502221 VCYO14598 125 aa8.36□□□□□ -1.07
AC055717.1-201ENST00000502221 LINC01620Q4KN68 170 aa8.36□□□□□ -1.07
AC055717.1-201ENST00000502221 C9orf139Q6ZV77 190 aa8.36□□□□□ -1.07
AC055717.1-201ENST00000502221 METTL26Q96S19 204 aa8.36□□□□□ -1.07
AC055717.1-201ENST00000502221 IMUPQ9GZP8 106 aa8.36□□□□□ -1.07
AC055717.1-201ENST00000502221 ZFAND3Q9H8U3 227 aa8.36□□□□□ -1.07
AC055717.1-201ENST00000502221 MDFICQ9P1T7 246 aa8.36□□□□□ -1.07
AC055717.1-201ENST00000502221 VPS13CQ709C8 3753 aa8.36□□□□□ -1.07
AC055717.1-201ENST00000502221 ANKHD1Q8IWZ3 2542 aaKnown RBP8.36□□□□□ -1.07
AC055717.1-201ENST00000502221 IGLV4-69A0A075B6H9 119 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 A0A1W2PPR1 153 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 SDHAF1A6NFY7 115 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 IGIPA6NJ69 53 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 J3QQQ9 107 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 LEPROTO15243 131 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 CRYGDP07320 174 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 S100A4P26447 101 aaKnown RBP8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 EBI3Q14213 229 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 FAM110DQ8TAY7 271 aaPredicted RBP8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 TMEM263Q8WUH6 116 aaKnown RBP8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 KIR2DL4Q99706 377 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 PHLDA3Q9Y5J5 127 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 SPG11Q96JI7 2443 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 OVOL1O14753 267 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 ACYP1P07311 99 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 COX6CP09669 75 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 PRTN3P24158 256 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 ARL3P36405 182 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 ZNF876PQ49A33 203 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 IGFL4Q6B9Z1 124 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 KLHL30-AS1Q8NEE0 82 aa8.35□□□□□ -1.07
AC055717.1-201ENST00000502221 TRAV4A0A0B4J268 109 aa8.34□□□□□ -1.07
AC055717.1-201ENST00000502221 H3BMM0 161 aa8.34□□□□□ -1.07
AC055717.1-201ENST00000502221 M0R2P5 195 aa8.34□□□□□ -1.07
AC055717.1-201ENST00000502221 LGALS9O00182 355 aa8.34□□□□□ -1.07
AC055717.1-201ENST00000502221 IGHV1-69P01742 117 aa8.34□□□□□ -1.07
AC055717.1-201ENST00000502221 DLX1P56177 255 aa8.34□□□□□ -1.07
AC055717.1-201ENST00000502221 HES1Q14469 280 aa8.34□□□□□ -1.07
AC055717.1-201ENST00000502221 UBE2WQ96B02 151 aa8.34□□□□□ -1.07
AC055717.1-201ENST00000502221 CADP27708 2225 aa8.34□□□□□ -1.07
AC055717.1-201ENST00000502221 TRBV7-1A0A0A6YYK4 115 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 TRAV2A0A0B4J234 112 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 ODF3BA8MYP8 253 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 NXPH4O95158 308 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 PRB4P10163 310 aaPredicted RBP8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 DEFB121Q5J5C9 76 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 MINOS1Q5TGZ0 78 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 SFTA2Q6UW10 78 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 C1orf122Q6ZSJ8 110 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 Q8N6K4 173 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 C15orf53Q8NAA6 179 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 NTN5Q8WTR8 489 aaPredicted RBP8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 MINOS1-NBL1R4GNA1 71 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 S4R3C0 116 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 U3KQE9 123 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 ROS1P08922 2347 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 ZFHX3Q15911 3703 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 A4D1N5 150 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 HERV-K104P63124 156 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 TMEM170BQ5T4T1 132 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 RNF182Q8N6D2 247 aa8.33□□□□□ -1.08
AC055717.1-201ENST00000502221 RNF223E7ERA6 249 aa8.32□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms