RNA–Protein interactions for RNA: ENST00000498751.1

SYNE1-231, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 4

Gene SYNE1, Length 578 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-231ENST00000498751 SPINK13Q1W4C9 94 aa5.61□□□□□ -1.51
SYNE1-231ENST00000498751 KHDC1LQ5JSQ8 128 aa5.61□□□□□ -1.51
SYNE1-231ENST00000498751 MUC21Q5SSG8 566 aa5.61□□□□□ -1.51
SYNE1-231ENST00000498751 IL17DQ8TAD2 202 aa5.61□□□□□ -1.51
SYNE1-231ENST00000498751 C14orf144Q96I85 54 aa5.61□□□□□ -1.51
SYNE1-231ENST00000498751 SMR3AQ99954 134 aa5.61□□□□□ -1.51
SYNE1-231ENST00000498751 SPXQ9BT56 116 aa5.61□□□□□ -1.51
SYNE1-231ENST00000498751 ST20Q9HBF5 79 aa5.61□□□□□ -1.51
SYNE1-231ENST00000498751 TRBV27A0A0K0K1C4 114 aa5.6□□□□□ -1.51
SYNE1-231ENST00000498751 SMKR1H3BMG3 65 aa5.6□□□□□ -1.51
SYNE1-231ENST00000498751 TCAPO15273 167 aa5.6□□□□□ -1.51
SYNE1-231ENST00000498751 ATP5LO75964 103 aa5.6□□□□□ -1.51
SYNE1-231ENST00000498751 NCR2O95944 276 aa5.6□□□□□ -1.51
SYNE1-231ENST00000498751 NUTF2P61970 127 aaKnown RBP5.6□□□□□ -1.51
SYNE1-231ENST00000498751 DEFA6Q01524 100 aa5.6□□□□□ -1.51
SYNE1-231ENST00000498751 LAGE3Q14657 143 aa5.6□□□□□ -1.51
SYNE1-231ENST00000498751 ORMDL2Q53FV1 153 aa5.6□□□□□ -1.51
SYNE1-231ENST00000498751 LINC00482Q8N8I6 264 aa5.6□□□□□ -1.51
SYNE1-231ENST00000498751 IFI27L1Q96BM0 104 aa5.6□□□□□ -1.51
SYNE1-231ENST00000498751 DUX3Q96PT4 197 aa5.6□□□□□ -1.51
SYNE1-231ENST00000498751 ZMAT4Q9H898 229 aa5.6□□□□□ -1.51
SYNE1-231ENST00000498751 FLNAP21333 2647 aaKnown RBP5.6□□□□□ -1.51
SYNE1-231ENST00000498751 TRAV12-1A0A0B4J245 112 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 KNCNA6PVL3 124 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 A8MWV9 139 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 OR11H12B2RN74 326 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 J3KRW8 73 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 INSP01308 110 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 IGLL1P15814 213 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 ZNF124Q15973 351 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 UFSP1Q6NVU6 142 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 LINC00173Q6ZV60 143 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 C14orf178Q8N769 122 aaPredicted RBP5.59□□□□□ -1.51
SYNE1-231ENST00000498751 C11orf72Q8NBR9 251 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 MDFICQ9P1T7 246 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 UQCR10Q9UDW1 63 aa5.59□□□□□ -1.51
SYNE1-231ENST00000498751 BAHCC1Q9P281 2608 aa5.59□□□□□ -1.52
SYNE1-231ENST00000498751 TRAV12-2A0A075B6T6 113 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 LOC389332A0A1B0GUA5 103 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 INAFM1C9JVW0 142 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 M0QY20 66 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 M0R2P5 195 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 CIDEAO60543 219 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 NPSP0C0P6 89 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 SMIM17P0DL12 118 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 GATA1P15976 413 aaPredicted RBP5.58□□□□□ -1.52
SYNE1-231ENST00000498751 RIPPLY3P57055 190 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 KRTAP10-3P60369 221 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 ZNF415Q09FC8 603 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 SPATA45Q537H7 98 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 PRR31Q5SQ13 230 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 MORN3Q6PF18 240 aaPredicted RBP5.58□□□□□ -1.52
SYNE1-231ENST00000498751 ZFP2Q6ZN57 461 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 TOMM6Q96B49 74 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 KRTAP4-7Q9BYR0 210 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 PRO1933Q9H354 126 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 MRPS16Q9Y3D3 137 aaKnown RBP5.58□□□□□ -1.52
SYNE1-231ENST00000498751 PAM16Q9Y3D7 125 aa5.58□□□□□ -1.52
SYNE1-231ENST00000498751 H7C1H1 209 aa5.57□□□□□ -1.52
SYNE1-231ENST00000498751 RHODO00212 210 aa5.57□□□□□ -1.52
SYNE1-231ENST00000498751 VCYO14598 125 aa5.57□□□□□ -1.52
SYNE1-231ENST00000498751 DLEU1O43261 78 aa5.57□□□□□ -1.52
SYNE1-231ENST00000498751 ZNF876PQ49A33 203 aa5.57□□□□□ -1.52
SYNE1-231ENST00000498751 SUMO4Q6EEV6 95 aa5.57□□□□□ -1.52
SYNE1-231ENST00000498751 ZNF705AQ6ZN79 300 aaPredicted RBP5.57□□□□□ -1.52
SYNE1-231ENST00000498751 STHQ8IWL8 128 aa5.57□□□□□ -1.52
SYNE1-231ENST00000498751 C1orf158Q8N1D5 194 aa5.57□□□□□ -1.52
SYNE1-231ENST00000498751 TMEM158Q8WZ71 300 aa5.57□□□□□ -1.52
SYNE1-231ENST00000498751 CITED1Q99966 193 aa5.57□□□□□ -1.52
SYNE1-231ENST00000498751 C2orf88Q9BSF0 95 aa5.57□□□□□ -1.52
SYNE1-231ENST00000498751 C1QTNF4Q9BXJ3 329 aa5.57□□□□□ -1.52
SYNE1-231ENST00000498751 CCDC168Q8NDH2 2452 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 ANK3Q12955 4377 aaKnown RBP5.56□□□□□ -1.52
SYNE1-231ENST00000498751 MUC4Q99102 2169 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 TRAV26-2A0A0B4J265 109 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 CBY3A6NI87 242 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 SAP30O75446 220 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 IGKV3-20P01619 116 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 CRYBA4P53673 196 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 SSTP61278 116 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 DAZ2Q13117 558 aaKnown RBP5.56□□□□□ -1.52
SYNE1-231ENST00000498751 ODF1Q14990 250 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 RHOHQ15669 191 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 NSUN5P1Q3KNT7 163 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 ERASQ7Z444 233 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 CSNK1G2-AS1Q8NCQ2 148 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 WFDC9Q8NEX5 89 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 RNASE8Q8TDE3 154 aaKnown RBP5.56□□□□□ -1.52
SYNE1-231ENST00000498751 DNAJC30Q96LL9 226 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 PMCHL2Q9BQD1 86 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 SELENOKQ9Y6D0 94 aa5.56□□□□□ -1.52
SYNE1-231ENST00000498751 ITPR2Q14571 2701 aa5.55□□□□□ -1.52
SYNE1-231ENST00000498751 AKAP9Q99996 3911 aa5.55□□□□□ -1.52
SYNE1-231ENST00000498751 A0A1W2PRX2 142 aa5.55□□□□□ -1.52
SYNE1-231ENST00000498751 HSBP1L1C9JCN9 74 aa5.55□□□□□ -1.52
SYNE1-231ENST00000498751 RS1O15537 224 aa5.55□□□□□ -1.52
SYNE1-231ENST00000498751 IGHV3-53P01767 116 aa5.55□□□□□ -1.52
SYNE1-231ENST00000498751 GIG44P09565 113 aaPredicted RBP5.55□□□□□ -1.52
SYNE1-231ENST00000498751 C9orf66Q5T8R8 295 aa5.55□□□□□ -1.52
SYNE1-231ENST00000498751 LCE4AQ5TA78 99 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 90.9 ms