RNA–Protein interactions for RNA: ENST00000498731.5

SOX2-OT-218, SOX2 overlapping transcript, humanhuman

TSL 1 (best) BASIC

Gene SOX2-OT, Length 3,576 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-218ENST00000498731 Q5XG85 94 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 HCP5Q6MZN7 132 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 LYZL1Q6UWQ5 148 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 IGKV1D-37A0A075B6S9 117 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 TRAV41A0A0B4J266 112 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 A0A1W2PPI3 338 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 A8MWV9 139 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 VPREB1P12018 145 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 ORM2P19652 201 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 LINC00305Q7Z4B0 112 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 MYOZ3Q8TDC0 251 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 DSCR8Q96T75 97 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 HIVEP1P15822 2718 aa4.44□□□□□ -1.7
SOX2-OT-218ENST00000498731 SLC25A20O43772 301 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 IGF1P05019 195 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 EMP1P54849 157 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 ZNF56Q15929 161 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 GOLT1AQ6ZVE7 132 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 TRAV26-2A0A0B4J265 109 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 TINCRA0A1B0GVN0 87 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 F5H697 171 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 UBE2D1P51668 147 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 C14orf178Q8N769 122 aaPredicted RBP4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 POM121L12Q8N7R1 296 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 SIGLEC9Q9Y336 463 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 VPS13CQ709C8 3753 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 NCBP2LA6PVI3 153 aaKnown RBP4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 NDUFA7O95182 113 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 TCRAP04437 139 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 CFC1BP0CG36 223 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 CFC1P0CG37 223 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 Q6ZSV7 163 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 Q86TA4 180 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 OR11H6Q8NGC7 330 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 SMCR5Q8TEV8 140 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 EEF1AKMT3Q96AZ1 226 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 PRADC1Q9BSG0 188 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 KLK15Q9H2R5 256 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 AAMDCQ9H7C9 122 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 S4R3C0 116 aa4.43□□□□□ -1.7
SOX2-OT-218ENST00000498731 C15orf61A6NNL5 157 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 DUSP14O95147 198 aaKnown RBP4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 SAA1P0DJI8 122 aaPredicted RBP4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 LOXP28300 417 aaPredicted RBP4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 C9orf153Q5TBE3 101 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 C19orf84I3L1E1 186 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 SLC25A16P16260 332 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 HSPE1P61604 102 aaKnown RBP4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 FAM104BQ5XKR9 115 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 NDUFA11Q86Y39 141 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 U3KQK5 164 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 FBN2P35556 2912 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 HIVEP2P31629 2446 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 M0R3E3 92 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 CNTFRP26992 372 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 ERHP84090 104 aaKnown RBP4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 RNF185Q96GF1 192 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 MRPL32Q9BYC8 188 aaKnown RBP4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 Q9H3A6 140 aa4.42□□□□□ -1.7
SOX2-OT-218ENST00000498731 TIMM23O14925 209 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 COX7A2P2O60397 106 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 DPM2O94777 84 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 IGHV4-39P01824 125 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 ORM1P02763 201 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 IGHV1-8P0DP01 117 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 CKS2P33552 79 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 C10orf113Q5VZT2 155 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 OR10J6PQ8NGY7 276 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 FAM19A4Q96LR4 140 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 TPSG1Q9NRR2 321 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 PRNDQ9UKY0 176 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 PKIGQ9Y2B9 76 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 NBEAL1Q6ZS30 2694 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 TRAV2A0A0B4J234 112 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 hADV29S1A0JD25 119 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 IGHG4P01861 327 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 KIR2DS2P43631 304 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 VMA21Q3ZAQ7 101 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 TEX36Q5VZQ5 186 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 PDPNQ86YL7 162 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 ORMDL3Q8N138 153 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 TMEM14BQ9NUH8 114 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 OTOGQ6ZRI0 2925 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 PDZD2O15018 2839 aa4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 FN1P02751 2386 aaKnown RBP4.41□□□□□ -1.7
SOX2-OT-218ENST00000498731 RNASE2P10153 161 aaKnown RBP4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 COX6B1P14854 86 aa4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 RPL35AP18077 110 aaKnown RBP4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 TSPEAR-AS2P59090 65 aa4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 TAL2Q16559 108 aa4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 SLC25A48Q6ZT89 311 aaKnown RBP4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 PIFOQ8TCI5 191 aa4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 TMEM126AQ9H061 195 aa4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 LINC00527Q9UJ94 153 aa4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 RAI1Q7Z5J4 1906 aaPredicted RBP4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 STAB1Q9NY15 2570 aa4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 C10orf126Q8N4M7 172 aa4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 GFRA4Q9GZZ7 299 aa4.4□□□□□ -1.7
SOX2-OT-218ENST00000498731 IGHV3-35A0A0C4DH35 117 aa4.4□□□□□ -1.71
SOX2-OT-218ENST00000498731 A0A1W2PPR1 153 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms