RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 IL7P13232 177 aa5.8□□□□□ -1.48
CCDC171-209ENST00000498725 MPV17L2Q567V2 206 aa5.8□□□□□ -1.48
CCDC171-209ENST00000498725 DGAT2L7PQ6IED9 249 aa5.8□□□□□ -1.48
CCDC171-209ENST00000498725 UFSP1Q6NVU6 142 aa5.8□□□□□ -1.48
CCDC171-209ENST00000498725 SDIM1Q6ZPB5 146 aa5.8□□□□□ -1.48
CCDC171-209ENST00000498725 OR10G7Q8NGN6 311 aa5.8□□□□□ -1.48
CCDC171-209ENST00000498725 SMIM3Q9BZL3 60 aa5.8□□□□□ -1.48
CCDC171-209ENST00000498725 PSG8Q9UQ74 426 aa5.8□□□□□ -1.48
CCDC171-209ENST00000498725 A0A087WYN8 130 aa5.79□□□□□ -1.48
CCDC171-209ENST00000498725 A0A1W2PPV4 95 aa5.79□□□□□ -1.48
CCDC171-209ENST00000498725 PLA2G10O15496 165 aa5.79□□□□□ -1.48
CCDC171-209ENST00000498725 LYRM1O43325 122 aa5.79□□□□□ -1.48
CCDC171-209ENST00000498725 CNPY1Q3B7I2 92 aa5.79□□□□□ -1.48
CCDC171-209ENST00000498725 SCGB1C1Q8TD33 95 aa5.79□□□□□ -1.48
CCDC171-209ENST00000498725 CHCHD5Q9BSY4 110 aa5.79□□□□□ -1.48
CCDC171-209ENST00000498725 CHCHD7Q9BUK0 85 aa5.79□□□□□ -1.48
CCDC171-209ENST00000498725 KIF25-AS1Q9Y6Z4 181 aa5.79□□□□□ -1.48
CCDC171-209ENST00000498725 IGLV10-54A0A075B6I4 117 aa5.78□□□□□ -1.48
CCDC171-209ENST00000498725 IGKV3D-20A0A0C4DH25 116 aa5.78□□□□□ -1.48
CCDC171-209ENST00000498725 hDV102S1A0JD36 115 aa5.78□□□□□ -1.48
CCDC171-209ENST00000498725 GRIFINA4D1Z8 144 aa5.78□□□□□ -1.48
CCDC171-209ENST00000498725 K7EQM0 130 aa5.78□□□□□ -1.48
CCDC171-209ENST00000498725 TCRAP04437 139 aa5.78□□□□□ -1.48
CCDC171-209ENST00000498725 RAB2AP61019 212 aa5.78□□□□□ -1.48
CCDC171-209ENST00000498725 RPL36AP83881 106 aaKnown RBP5.78□□□□□ -1.48
CCDC171-209ENST00000498725 RPL19P84098 196 aaKnown RBP5.78□□□□□ -1.48
CCDC171-209ENST00000498725 FLI1Q01543 452 aaPredicted RBP5.78□□□□□ -1.48
CCDC171-209ENST00000498725 RPL36ALQ969Q0 106 aaKnown RBP5.78□□□□□ -1.48
CCDC171-209ENST00000498725 LINC01600Q96MT4 127 aa5.78□□□□□ -1.48
CCDC171-209ENST00000498725 TRAV34A0A0B4J273 112 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 B4DEV8 164 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 H0YIZ8 118 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 M0R036 132 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 M0R381 172 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 RHODO00212 210 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 PTTG1O95997 202 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 ARMS2P0C7Q2 107 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 ARL14EPLP0DKL9 152 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 UBE2D3P61077 147 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 UBE2D2P62837 147 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 PQLC2Q6ZP29 291 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 ARL6IP6Q8N6S5 226 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 OR11H4Q8NGC9 324 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 C7orf33Q8WU49 177 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 GTSF1Q8WW33 167 aa5.77□□□□□ -1.49
CCDC171-209ENST00000498725 TRBV7-3A0A075B6L6 115 aa5.76□□□□□ -1.49
CCDC171-209ENST00000498725 IGHV3-64A0A075B6Q5 118 aa5.76□□□□□ -1.49
CCDC171-209ENST00000498725 TMSB15BA0A087X1C1 80 aa5.76□□□□□ -1.49
CCDC171-209ENST00000498725 TRBV6-8A0A0A6YYG3 113 aa5.76□□□□□ -1.49
CCDC171-209ENST00000498725 RAB5CP51148 216 aa5.76□□□□□ -1.49
CCDC171-209ENST00000498725 SUMO1P63165 101 aaKnown RBP5.76□□□□□ -1.49
CCDC171-209ENST00000498725 GAGE6Q13070 117 aa5.76□□□□□ -1.49
CCDC171-209ENST00000498725 MIAQ16674 131 aa5.76□□□□□ -1.49
CCDC171-209ENST00000498725 LINC00269Q8N2A0 174 aa5.76□□□□□ -1.49
CCDC171-209ENST00000498725 C5orf17Q8NAS9 161 aa5.76□□□□□ -1.49
CCDC171-209ENST00000498725 LYPD6BQ8NI32 183 aa5.76□□□□□ -1.49
CCDC171-209ENST00000498725 IL36BQ9NZH7 164 aa5.76□□□□□ -1.49
CCDC171-209ENST00000498725 SERTM2A0A1B0GWG4 89 aa5.75□□□□□ -1.49
CCDC171-209ENST00000498725 FABP5P3A8MUU1 101 aa5.75□□□□□ -1.49
CCDC171-209ENST00000498725 GHRHP01286 108 aa5.75□□□□□ -1.49
CCDC171-209ENST00000498725 CIRBPQ14011 172 aaKnown RBP5.75□□□□□ -1.49
CCDC171-209ENST00000498725 PIK3CD-AS1Q5SR53 167 aa5.75□□□□□ -1.49
CCDC171-209ENST00000498725 WDR73Q6P4I2 378 aa5.75□□□□□ -1.49
CCDC171-209ENST00000498725 SFRP2Q96HF1 295 aa5.75□□□□□ -1.49
CCDC171-209ENST00000498725 EPDR1Q9UM22 224 aa5.75□□□□□ -1.49
CCDC171-209ENST00000498725 HSPB11Q9Y547 144 aa5.75□□□□□ -1.49
CCDC171-209ENST00000498725 PHLDA3Q9Y5J5 127 aa5.75□□□□□ -1.49
CCDC171-209ENST00000498725 ARL2-SNX15V9GYD0 113 aa5.75□□□□□ -1.49
CCDC171-209ENST00000498725 IGKV2-24A0A0C4DH68 120 aa5.74□□□□□ -1.49
CCDC171-209ENST00000498725 A0A0J9YXV3 536 aa5.74□□□□□ -1.49
CCDC171-209ENST00000498725 TPT1P13693 172 aaKnown RBP5.74□□□□□ -1.49
CCDC171-209ENST00000498725 CDC34P49427 236 aaPredicted RBP5.74□□□□□ -1.49
CCDC171-209ENST00000498725 DEFA3P59666 94 aa5.74□□□□□ -1.49
CCDC171-209ENST00000498725 ZNF56Q15929 161 aa5.74□□□□□ -1.49
CCDC171-209ENST00000498725 SAPCD1Q5SSQ6 148 aa5.74□□□□□ -1.49
CCDC171-209ENST00000498725 KRTAP26-1Q6PEX3 210 aa5.74□□□□□ -1.49
CCDC171-209ENST00000498725 NEXN-AS1Q8NBZ9 246 aa5.74□□□□□ -1.49
CCDC171-209ENST00000498725 SPACA4Q8TDM5 124 aa5.74□□□□□ -1.49
CCDC171-209ENST00000498725 RNF185Q96GF1 192 aa5.74□□□□□ -1.49
CCDC171-209ENST00000498725 WFDC1Q9HC57 220 aa5.74□□□□□ -1.49
CCDC171-209ENST00000498725 AP5S1Q9NUS5 200 aa5.74□□□□□ -1.49
CCDC171-209ENST00000498725 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.73□□□□□ -1.49
CCDC171-209ENST00000498725 MUC21A0A0G2JKD1 596 aa5.73□□□□□ -1.49
CCDC171-209ENST00000498725 TRBV10-1A0A0K0K1A3 114 aa5.73□□□□□ -1.49
CCDC171-209ENST00000498725 FAM240BA0A1B0GVZ2 78 aa5.73□□□□□ -1.49
CCDC171-209ENST00000498725 KRBOX1C9JBD0 128 aa5.73□□□□□ -1.49
CCDC171-209ENST00000498725 SLPIP03973 132 aa5.73□□□□□ -1.49
CCDC171-209ENST00000498725 GCHFRP30047 84 aa5.73□□□□□ -1.49
CCDC171-209ENST00000498725 RPL12P30050 165 aaKnown RBP5.73□□□□□ -1.49
CCDC171-209ENST00000498725 KRTAP10-8P60410 259 aa5.73□□□□□ -1.49
CCDC171-209ENST00000498725 RBX1P62877 108 aa5.73□□□□□ -1.49
CCDC171-209ENST00000498725 PRR3P79522 188 aaKnown RBP5.73□□□□□ -1.49
CCDC171-209ENST00000498725 MAJINQ3KP22 176 aa5.73□□□□□ -1.49
CCDC171-209ENST00000498725 CLRN3Q8NCR9 226 aa5.73□□□□□ -1.49
CCDC171-209ENST00000498725 PLAC8Q9NZF1 115 aa5.73□□□□□ -1.49
CCDC171-209ENST00000498725 SH2D1AO60880 128 aa5.72□□□□□ -1.49
CCDC171-209ENST00000498725 IFNA7P01567 189 aa5.72□□□□□ -1.49
CCDC171-209ENST00000498725 SSTP61278 116 aa5.72□□□□□ -1.49
CCDC171-209ENST00000498725 CNBPP62633 177 aaKnown RBP5.72□□□□□ -1.49
CCDC171-209ENST00000498725 COX6A2Q02221 97 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms