RNA–Protein interactions for RNA: ENST00000498500.1

THBS3-209, Transcript of thrombospondin 3, humanhuman

TSL 2

Gene THBS3, Length 768 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3-209ENST00000498500 IGHV3-73A0A0B4J1V6 119 aa8.12□□□□□ -1.11
THBS3-209ENST00000498500 GRIFINA4D1Z8 144 aa8.12□□□□□ -1.11
THBS3-209ENST00000498500 S100A4P26447 101 aaKnown RBP8.12□□□□□ -1.11
THBS3-209ENST00000498500 RPL35P42766 123 aaKnown RBP8.12□□□□□ -1.11
THBS3-209ENST00000498500 SLC25A29Q8N8R3 303 aa8.12□□□□□ -1.11
THBS3-209ENST00000498500 SYT8Q8NBV8 401 aa8.12□□□□□ -1.11
THBS3-209ENST00000498500 TMEM70Q9BUB7 260 aa8.12□□□□□ -1.11
THBS3-209ENST00000498500 JPT2Q9H910 190 aa8.12□□□□□ -1.11
THBS3-209ENST00000498500 MSRB1Q9NZV6 116 aa8.12□□□□□ -1.11
THBS3-209ENST00000498500 LY96Q9Y6Y9 160 aa8.12□□□□□ -1.11
THBS3-209ENST00000498500 TMSB15BA0A087X1C1 80 aa8.11□□□□□ -1.11
THBS3-209ENST00000498500 KRTAP29-1A8MX34 341 aaPredicted RBP8.11□□□□□ -1.11
THBS3-209ENST00000498500 CIDEAO60543 219 aa8.11□□□□□ -1.11
THBS3-209ENST00000498500 IGLV2-8P01709 118 aa8.11□□□□□ -1.11
THBS3-209ENST00000498500 CXCL1P09341 107 aa8.11□□□□□ -1.11
THBS3-209ENST00000498500 ARMS2P0C7Q2 107 aa8.11□□□□□ -1.11
THBS3-209ENST00000498500 LINC00694P0DN24 101 aa8.11□□□□□ -1.11
THBS3-209ENST00000498500 BCL2P10415 239 aa8.11□□□□□ -1.11
THBS3-209ENST00000498500 RPL19P84098 196 aaKnown RBP8.11□□□□□ -1.11
THBS3-209ENST00000498500 SERTAD4-AS1Q5TG53 156 aa8.11□□□□□ -1.11
THBS3-209ENST00000498500 BAGE2Q86Y30 109 aa8.11□□□□□ -1.11
THBS3-209ENST00000498500 SAMD10Q9BYL1 202 aa8.11□□□□□ -1.11
THBS3-209ENST00000498500 UBR4Q5T4S7 5183 aa8.1□□□□□ -1.11
THBS3-209ENST00000498500 TRBV6-4A0A1B0GX49 114 aa8.1□□□□□ -1.11
THBS3-209ENST00000498500 A8MWV9 139 aa8.1□□□□□ -1.11
THBS3-209ENST00000498500 PLA2G1BP04054 148 aaKnown RBP8.1□□□□□ -1.11
THBS3-209ENST00000498500 TIRAPP58753 221 aa8.1□□□□□ -1.11
THBS3-209ENST00000498500 MEF2BQ02080 365 aaPredicted RBP8.1□□□□□ -1.11
THBS3-209ENST00000498500 RHOHQ15669 191 aa8.1□□□□□ -1.11
THBS3-209ENST00000498500 CENPWQ5EE01 88 aa8.1□□□□□ -1.11
THBS3-209ENST00000498500 ZFP2Q6ZN57 461 aa8.1□□□□□ -1.11
THBS3-209ENST00000498500 WFDC10BQ8IUB3 73 aa8.1□□□□□ -1.11
THBS3-209ENST00000498500 TXNDC17Q9BRA2 123 aa8.1□□□□□ -1.11
THBS3-209ENST00000498500 TRBV20OR9-2A0A075B6H5 130 aa8.09□□□□□ -1.11
THBS3-209ENST00000498500 TEX46H3BTG2 121 aa8.09□□□□□ -1.11
THBS3-209ENST00000498500 MGST1P10620 155 aaKnown RBP8.09□□□□□ -1.11
THBS3-209ENST00000498500 EVI2AP22794 236 aa8.09□□□□□ -1.11
THBS3-209ENST00000498500 ALKAL2Q6UX46 152 aa8.09□□□□□ -1.11
THBS3-209ENST00000498500 SNAI2O43623 268 aa8.08□□□□□ -1.12
THBS3-209ENST00000498500 PSCAO43653 123 aa8.08□□□□□ -1.12
THBS3-209ENST00000498500 IFNA1P01562 189 aa8.08□□□□□ -1.12
THBS3-209ENST00000498500 PRR27Q6MZM9 219 aa8.08□□□□□ -1.12
THBS3-209ENST00000498500 SFRP2Q96HF1 295 aa8.08□□□□□ -1.12
THBS3-209ENST00000498500 FAM210AQ96ND0 272 aa8.08□□□□□ -1.12
THBS3-209ENST00000498500 PRADC1Q9BSG0 188 aa8.08□□□□□ -1.12
THBS3-209ENST00000498500 Q9UF83 564 aa8.08□□□□□ -1.12
THBS3-209ENST00000498500 RAB19A4D1S5 217 aa8.07□□□□□ -1.12
THBS3-209ENST00000498500 K7EP13 123 aa8.07□□□□□ -1.12
THBS3-209ENST00000498500 M0R381 172 aa8.07□□□□□ -1.12
THBS3-209ENST00000498500 RHODO00212 210 aa8.07□□□□□ -1.12
THBS3-209ENST00000498500 PDE6DO43924 150 aa8.07□□□□□ -1.12
THBS3-209ENST00000498500 SH2D6Q7Z4S9 175 aa8.07□□□□□ -1.12
THBS3-209ENST00000498500 ZFP82Q8N141 532 aa8.07□□□□□ -1.12
THBS3-209ENST00000498500 C14orf178Q8N769 122 aaPredicted RBP8.07□□□□□ -1.12
THBS3-209ENST00000498500 OR10AG1Q8NH19 301 aa8.07□□□□□ -1.12
THBS3-209ENST00000498500 LYPD6BQ8NI32 183 aa8.07□□□□□ -1.12
THBS3-209ENST00000498500 DEFB104AQ8WTQ1 72 aa8.07□□□□□ -1.12
THBS3-209ENST00000498500 NTN5Q8WTR8 489 aaPredicted RBP8.07□□□□□ -1.12
THBS3-209ENST00000498500 VAX2Q9UIW0 290 aa8.07□□□□□ -1.12
THBS3-209ENST00000498500 PHLDA3Q9Y5J5 127 aa8.07□□□□□ -1.12
THBS3-209ENST00000498500 DNAH8Q96JB1 4490 aa8.06□□□□□ -1.12
THBS3-209ENST00000498500 C19orf71A6NCJ1 209 aa8.06□□□□□ -1.12
THBS3-209ENST00000498500 CRYGDP07320 174 aa8.06□□□□□ -1.12
THBS3-209ENST00000498500 SMIM12Q96EX1 92 aa8.06□□□□□ -1.12
THBS3-209ENST00000498500 SSBP4Q9BWG4 385 aaPredicted RBP8.06□□□□□ -1.12
THBS3-209ENST00000498500 FAM30AQ9NZY2 134 aa8.06□□□□□ -1.12
THBS3-209ENST00000498500 HMCN2Q8NDA2 5059 aa8.06□□□□□ -1.12
THBS3-209ENST00000498500 A0A087WWL8 130 aa8.05□□□□□ -1.12
THBS3-209ENST00000498500 OR5AL1P0C617 328 aa8.05□□□□□ -1.12
THBS3-209ENST00000498500 TAGLN2P37802 199 aaKnown RBP8.05□□□□□ -1.12
THBS3-209ENST00000498500 GNG4P50150 75 aa8.05□□□□□ -1.12
THBS3-209ENST00000498500 FAM74A4Q5TZK3 123 aa8.05□□□□□ -1.12
THBS3-209ENST00000498500 C10orf126Q8N4M7 172 aa8.05□□□□□ -1.12
THBS3-209ENST00000498500 PLA2G2DQ9UNK4 145 aa8.05□□□□□ -1.12
THBS3-209ENST00000498500 GAGE12JA6NER3 117 aa8.04□□□□□ -1.12
THBS3-209ENST00000498500 IGLC6P0CF74 106 aa8.04□□□□□ -1.12
THBS3-209ENST00000498500 BLOC1S1P78537 153 aa8.04□□□□□ -1.12
THBS3-209ENST00000498500 GAGE1Q13065 139 aa8.04□□□□□ -1.12
THBS3-209ENST00000498500 GAGE4Q13068 117 aa8.04□□□□□ -1.12
THBS3-209ENST00000498500 GAGE5Q13069 117 aa8.04□□□□□ -1.12
THBS3-209ENST00000498500 GAGE13Q4V321 117 aa8.04□□□□□ -1.12
THBS3-209ENST00000498500 LINC00528Q8N1L1 170 aa8.04□□□□□ -1.12
THBS3-209ENST00000498500 ATP6V0E2Q8NHE4 81 aa8.04□□□□□ -1.12
THBS3-209ENST00000498500 MED9Q9NWA0 146 aa8.04□□□□□ -1.12
THBS3-209ENST00000498500 MUC21A0A0G2JKD1 596 aa8.03□□□□□ -1.12
THBS3-209ENST00000498500 MUC21A0A140T8X8 626 aa8.03□□□□□ -1.12
THBS3-209ENST00000498500 LRCOL1A6NCL2 159 aa8.03□□□□□ -1.12
THBS3-209ENST00000498500 GZMBP10144 247 aa8.03□□□□□ -1.12
THBS3-209ENST00000498500 LINC01556Q5JQF7 62 aa8.03□□□□□ -1.12
THBS3-209ENST00000498500 LELP1Q5T871 98 aa8.03□□□□□ -1.12
THBS3-209ENST00000498500 GTSF1LQ9H1H1 148 aa8.03□□□□□ -1.12
THBS3-209ENST00000498500 K7EN84 100 aa8.02□□□□□ -1.13
THBS3-209ENST00000498500 Q8N814 137 aa8.02□□□□□ -1.13
THBS3-209ENST00000498500 OR2D3Q8NGH3 330 aa8.02□□□□□ -1.13
THBS3-209ENST00000498500 LRP1Q07954 4544 aaKnown RBP8.01□□□□□ -1.13
THBS3-209ENST00000498500 IGHV3-38A0A0C4DH36 116 aa8.01□□□□□ -1.13
THBS3-209ENST00000498500 RBFOX3A6NFN3 312 aa8.01□□□□□ -1.13
THBS3-209ENST00000498500 TMEM250H0YL14 139 aa8.01□□□□□ -1.13
THBS3-209ENST00000498500 IFITM2Q01629 132 aa8.01□□□□□ -1.13
THBS3-209ENST00000498500 OR10J3Q5JRS4 329 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms