RNA–Protein interactions for RNA: ENST00000497869.5

TNFRSF4-203, Transcript of TNF receptor superfamily member 4, humanhuman

TSL 2

Gene TNFRSF4, Length 1,707 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4-203ENST00000497869 DKK2Q9UBU2 259 aa17.26■□□□□ 0.35
TNFRSF4-203ENST00000497869 GAS8-AS1O95177 125 aa17.25■□□□□ 0.35
TNFRSF4-203ENST00000497869 TRGC2P03986 189 aa17.25■□□□□ 0.35
TNFRSF4-203ENST00000497869 PIK3CD-AS1Q5SR53 167 aa17.25■□□□□ 0.35
TNFRSF4-203ENST00000497869 CFAP126Q5VTH2 177 aa17.25■□□□□ 0.35
TNFRSF4-203ENST00000497869 MRPL18Q9H0U6 180 aaKnown RBP17.25■□□□□ 0.35
TNFRSF4-203ENST00000497869 COL7A1Q02388 2944 aa17.25■□□□□ 0.35
TNFRSF4-203ENST00000497869 FABP9Q0Z7S8 132 aa17.24■□□□□ 0.35
TNFRSF4-203ENST00000497869 KIAA1644Q3SXP7 199 aa17.24■□□□□ 0.35
TNFRSF4-203ENST00000497869 FAM104BQ5XKR9 115 aa17.24■□□□□ 0.35
TNFRSF4-203ENST00000497869 AP1S3Q96PC3 154 aa17.24■□□□□ 0.35
TNFRSF4-203ENST00000497869 TRAPPC1Q9Y5R8 145 aa17.24■□□□□ 0.35
TNFRSF4-203ENST00000497869 RAB4AP20338 218 aa17.24■□□□□ 0.35
TNFRSF4-203ENST00000497869 RS1O15537 224 aa17.23■□□□□ 0.35
TNFRSF4-203ENST00000497869 TRGC1P0CF51 173 aa17.23■□□□□ 0.35
TNFRSF4-203ENST00000497869 IGHV3-73A0A0B4J1V6 119 aa17.22■□□□□ 0.35
TNFRSF4-203ENST00000497869 HLA-DQA1P01909 254 aa17.22■□□□□ 0.35
TNFRSF4-203ENST00000497869 S100A8P05109 93 aa17.22■□□□□ 0.35
TNFRSF4-203ENST00000497869 DEFB130BP0DP73 79 aa17.22■□□□□ 0.35
TNFRSF4-203ENST00000497869 DEFB130AP0DP74 79 aa17.22■□□□□ 0.35
TNFRSF4-203ENST00000497869 MRPL51Q4U2R6 128 aaKnown RBP17.21■□□□□ 0.35
TNFRSF4-203ENST00000497869 FAM74A4Q5TZK3 123 aa17.21■□□□□ 0.35
TNFRSF4-203ENST00000497869 Q6ZSN1 163 aa17.21■□□□□ 0.35
TNFRSF4-203ENST00000497869 FRZBQ92765 325 aa17.21■□□□□ 0.35
TNFRSF4-203ENST00000497869 ZNF479Q96JC4 524 aa17.21■□□□□ 0.35
TNFRSF4-203ENST00000497869 TRAV26-2A0A0B4J265 109 aa17.21■□□□□ 0.35
TNFRSF4-203ENST00000497869 A0A0J9YWU9 116 aa17.21■□□□□ 0.35
TNFRSF4-203ENST00000497869 IGHV3-53P01767 116 aa17.21■□□□□ 0.35
TNFRSF4-203ENST00000497869 COX19Q49B96 90 aa17.21■□□□□ 0.35
TNFRSF4-203ENST00000497869 DPH3P1Q9H4G8 78 aa17.21■□□□□ 0.35
TNFRSF4-203ENST00000497869 SMKR1H3BMG3 65 aa17.2■□□□□ 0.34
TNFRSF4-203ENST00000497869 APCSP02743 223 aa17.2■□□□□ 0.34
TNFRSF4-203ENST00000497869 C11orf68Q9H3H3 251 aaKnown RBP17.2■□□□□ 0.34
TNFRSF4-203ENST00000497869 LYRM9A8MSI8 78 aa17.19■□□□□ 0.34
TNFRSF4-203ENST00000497869 A8MWV9 139 aa17.19■□□□□ 0.34
TNFRSF4-203ENST00000497869 MT-ND6P03923 174 aa17.19■□□□□ 0.34
TNFRSF4-203ENST00000497869 NDUFAF3Q9BU61 184 aa17.19■□□□□ 0.34
TNFRSF4-203ENST00000497869 NACAE9PAV3 2078 aa17.19■□□□□ 0.34
TNFRSF4-203ENST00000497869 GATA1P15976 413 aaPredicted RBP17.18■□□□□ 0.34
TNFRSF4-203ENST00000497869 TRGV2A0A075B6R0 118 aa17.18■□□□□ 0.34
TNFRSF4-203ENST00000497869 MGPP08493 103 aa17.18■□□□□ 0.34
TNFRSF4-203ENST00000497869 FBN3Q75N90 2809 aa17.18■□□□□ 0.34
TNFRSF4-203ENST00000497869 NCR2O95944 276 aa17.17■□□□□ 0.34
TNFRSF4-203ENST00000497869 SMIM15Q7Z3B0 74 aa17.17■□□□□ 0.34
TNFRSF4-203ENST00000497869 OR4C5Q8NGB2 326 aa17.17■□□□□ 0.34
TNFRSF4-203ENST00000497869 TRAV4A0A0B4J268 109 aa17.16■□□□□ 0.34
TNFRSF4-203ENST00000497869 C18orf15Q96N68 181 aa17.16■□□□□ 0.34
TNFRSF4-203ENST00000497869 ZMAT4Q9H898 229 aa17.16■□□□□ 0.34
TNFRSF4-203ENST00000497869 Q9UF83 564 aa17.16■□□□□ 0.34
TNFRSF4-203ENST00000497869 SPART-AS1P0CW21 52 aa17.16■□□□□ 0.34
TNFRSF4-203ENST00000497869 SUMO4Q6EEV6 95 aa17.16■□□□□ 0.34
TNFRSF4-203ENST00000497869 U3KQK5 164 aa17.16■□□□□ 0.34
TNFRSF4-203ENST00000497869 D6R8Y8 96 aa17.15■□□□□ 0.34
TNFRSF4-203ENST00000497869 SMIM17P0DL12 118 aa17.15■□□□□ 0.34
TNFRSF4-203ENST00000497869 C12orf74Q32Q52 190 aa17.15■□□□□ 0.34
TNFRSF4-203ENST00000497869 HOXA5P20719 270 aa17.13■□□□□ 0.33
TNFRSF4-203ENST00000497869 ZNF56Q15929 161 aa17.13■□□□□ 0.33
TNFRSF4-203ENST00000497869 ALKBH7Q9BT30 221 aaPredicted RBP17.13■□□□□ 0.33
TNFRSF4-203ENST00000497869 F5H697 171 aa17.12■□□□□ 0.33
TNFRSF4-203ENST00000497869 P0DMU3 169 aa17.12■□□□□ 0.33
TNFRSF4-203ENST00000497869 FAM231AP0DMU4 169 aa17.12■□□□□ 0.33
TNFRSF4-203ENST00000497869 FAM231CP0DMU5 169 aa17.12■□□□□ 0.33
TNFRSF4-203ENST00000497869 FHL2Q14192 279 aa17.12■□□□□ 0.33
TNFRSF4-203ENST00000497869 ZFP2Q6ZN57 461 aa17.12■□□□□ 0.33
TNFRSF4-203ENST00000497869 M0QY20 66 aa17.11■□□□□ 0.33
TNFRSF4-203ENST00000497869 SRIP30626 198 aa17.11■□□□□ 0.33
TNFRSF4-203ENST00000497869 DAD1P61803 113 aa17.11■□□□□ 0.33
TNFRSF4-203ENST00000497869 NRACQ8N912 160 aa17.11■□□□□ 0.33
TNFRSF4-203ENST00000497869 RPL39LQ96EH5 51 aaKnown RBP17.11■□□□□ 0.33
TNFRSF4-203ENST00000497869 CKS2P33552 79 aa17.1■□□□□ 0.33
TNFRSF4-203ENST00000497869 RHODO00212 210 aa17.1■□□□□ 0.33
TNFRSF4-203ENST00000497869 NPYP01303 97 aa17.1■□□□□ 0.33
TNFRSF4-203ENST00000497869 HIST1H2BKO60814 126 aa17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 HIST1H2BJP06899 126 aa17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 HIST1H2BOP23527 126 aa17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 HIST1H2BBP33778 126 aa17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 HIST1H2BDP58876 126 aa17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 HIST1H2BCP62807 126 aa17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 HIST2H2BEQ16778 126 aa17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 HIST2H2BFQ5QNW6 126 aaPredicted RBP17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 HIST1H2BHQ93079 126 aa17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 MRAP2Q96G30 205 aa17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 HIST1H2BNQ99877 126 aa17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 HIST1H2BMQ99879 126 aa17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 STAB2Q8WWQ8 2551 aa17.09■□□□□ 0.33
TNFRSF4-203ENST00000497869 NANOS2P60321 138 aaKnown RBP17.08■□□□□ 0.32
TNFRSF4-203ENST00000497869 ORMDL3Q8N138 153 aa17.08■□□□□ 0.32
TNFRSF4-203ENST00000497869 C1orf196B1AJZ1 125 aa17.07■□□□□ 0.32
TNFRSF4-203ENST00000497869 NHLRC4P0CG21 123 aaPredicted RBP17.07■□□□□ 0.32
TNFRSF4-203ENST00000497869 Q6ZTC4 211 aa17.07■□□□□ 0.32
TNFRSF4-203ENST00000497869 SLC25A29Q8N8R3 303 aa17.07■□□□□ 0.32
TNFRSF4-203ENST00000497869 PRELID3AQ96N28 172 aa17.07■□□□□ 0.32
TNFRSF4-203ENST00000497869 IQCJQ1A5X6 159 aa17.06■□□□□ 0.32
TNFRSF4-203ENST00000497869 TNFRSF6BO95407 300 aa17.05■□□□□ 0.32
TNFRSF4-203ENST00000497869 C11orf45Q8TAV5 145 aa17.05■□□□□ 0.32
TNFRSF4-203ENST00000497869 TEX48A0A1B0GUV7 120 aa17.04■□□□□ 0.32
TNFRSF4-203ENST00000497869 EDA2RQ9HAV5 297 aa17.04■□□□□ 0.32
TNFRSF4-203ENST00000497869 TRGV4A0A0C4DH28 118 aa17.04■□□□□ 0.32
TNFRSF4-203ENST00000497869 LOC100131303A0A0U1RQF7 123 aa17.04■□□□□ 0.32
TNFRSF4-203ENST00000497869 PPBPP02775 128 aa17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms