RNA–Protein interactions for RNA: ENST00000497251.1

TRAPPC3-207, Transcript of trafficking protein particle complex 3, humanhuman

TSL 2

Gene TRAPPC3, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-207ENST00000497251 DEFB104AQ8WTQ1 72 aa11.18□□□□□ -0.62
TRAPPC3-207ENST00000497251 FABP5P3A8MUU1 101 aa11.17□□□□□ -0.62
TRAPPC3-207ENST00000497251 H2AFB1P0C5Y9 115 aa11.17□□□□□ -0.62
TRAPPC3-207ENST00000497251 RAB5CP51148 216 aa11.17□□□□□ -0.62
TRAPPC3-207ENST00000497251 UBE2G1P62253 170 aa11.17□□□□□ -0.62
TRAPPC3-207ENST00000497251 FAM30AQ9NZY2 134 aa11.17□□□□□ -0.62
TRAPPC3-207ENST00000497251 IGHV3-73A0A0B4J1V6 119 aa11.16□□□□□ -0.62
TRAPPC3-207ENST00000497251 KRTAP29-1A8MX34 341 aaPredicted RBP11.16□□□□□ -0.62
TRAPPC3-207ENST00000497251 PAGE4O60829 102 aa11.16□□□□□ -0.62
TRAPPC3-207ENST00000497251 LINC00694P0DN24 101 aa11.16□□□□□ -0.62
TRAPPC3-207ENST00000497251 S100A4P26447 101 aaKnown RBP11.16□□□□□ -0.62
TRAPPC3-207ENST00000497251 Q8N976 141 aa11.16□□□□□ -0.62
TRAPPC3-207ENST00000497251 PARLQ9H300 379 aa11.16□□□□□ -0.62
TRAPPC3-207ENST00000497251 RHODO00212 210 aa11.15□□□□□ -0.62
TRAPPC3-207ENST00000497251 AKR1C3P42330 323 aa11.15□□□□□ -0.62
TRAPPC3-207ENST00000497251 CHCHD7Q9BUK0 85 aa11.15□□□□□ -0.62
TRAPPC3-207ENST00000497251 IL36BQ9NZH7 164 aa11.15□□□□□ -0.62
TRAPPC3-207ENST00000497251 URGCP-MRPS24S4R325 110 aa11.15□□□□□ -0.62
TRAPPC3-207ENST00000497251 TRAV1-1A0A0B4J248 108 aa11.14□□□□□ -0.63
TRAPPC3-207ENST00000497251 IGKV3D-20A0A0C4DH25 116 aa11.14□□□□□ -0.63
TRAPPC3-207ENST00000497251 LTAP01374 205 aa11.14□□□□□ -0.63
TRAPPC3-207ENST00000497251 S100A9P06702 114 aaKnown RBP11.14□□□□□ -0.63
TRAPPC3-207ENST00000497251 ASIPP42127 132 aa11.14□□□□□ -0.63
TRAPPC3-207ENST00000497251 HAMPP81172 84 aa11.14□□□□□ -0.63
TRAPPC3-207ENST00000497251 ELOBQ15370 118 aa11.14□□□□□ -0.63
TRAPPC3-207ENST00000497251 AKAP14Q86UN6 197 aa11.14□□□□□ -0.63
TRAPPC3-207ENST00000497251 ZC2HC1AQ96GY0 325 aa11.14□□□□□ -0.63
TRAPPC3-207ENST00000497251 A0A1B0GV50 99 aa11.13□□□□□ -0.63
TRAPPC3-207ENST00000497251 DNLZQ5SXM8 178 aa11.13□□□□□ -0.63
TRAPPC3-207ENST00000497251 FAM162BQ5T6X4 162 aa11.13□□□□□ -0.63
TRAPPC3-207ENST00000497251 SLC51BQ86UW2 128 aa11.13□□□□□ -0.63
TRAPPC3-207ENST00000497251 SYT8Q8NBV8 401 aa11.13□□□□□ -0.63
TRAPPC3-207ENST00000497251 MANBALQ9NQG1 85 aa11.13□□□□□ -0.63
TRAPPC3-207ENST00000497251 GAGE12JA6NER3 117 aa11.12□□□□□ -0.63
TRAPPC3-207ENST00000497251 TEX46H3BTG2 121 aa11.12□□□□□ -0.63
TRAPPC3-207ENST00000497251 SULT1A2P50226 295 aa11.12□□□□□ -0.63
TRAPPC3-207ENST00000497251 CRIP1P50238 77 aa11.12□□□□□ -0.63
TRAPPC3-207ENST00000497251 GAGE1Q13065 139 aa11.12□□□□□ -0.63
TRAPPC3-207ENST00000497251 GAGE4Q13068 117 aa11.12□□□□□ -0.63
TRAPPC3-207ENST00000497251 GAGE5Q13069 117 aa11.12□□□□□ -0.63
TRAPPC3-207ENST00000497251 ZNF674Q2M3X9 581 aa11.12□□□□□ -0.63
TRAPPC3-207ENST00000497251 GAGE13Q4V321 117 aa11.12□□□□□ -0.63
TRAPPC3-207ENST00000497251 LINC00528Q8N1L1 170 aa11.12□□□□□ -0.63
TRAPPC3-207ENST00000497251 B4DEV8 164 aa11.11□□□□□ -0.63
TRAPPC3-207ENST00000497251 SH2D1AO60880 128 aa11.11□□□□□ -0.63
TRAPPC3-207ENST00000497251 UFSP1Q6NVU6 142 aa11.11□□□□□ -0.63
TRAPPC3-207ENST00000497251 DAZ4Q86SG3 579 aaKnown RBP11.11□□□□□ -0.63
TRAPPC3-207ENST00000497251 DAZ3Q9NR90 486 aaKnown RBP11.11□□□□□ -0.63
TRAPPC3-207ENST00000497251 DNAH8Q96JB1 4490 aa11.11□□□□□ -0.63
TRAPPC3-207ENST00000497251 SCO2A0A1W2PP80 73 aa11.1□□□□□ -0.63
TRAPPC3-207ENST00000497251 KRBOX1C9JBD0 128 aa11.1□□□□□ -0.63
TRAPPC3-207ENST00000497251 KCNIP4Q6PIL6 250 aa11.1□□□□□ -0.63
TRAPPC3-207ENST00000497251 NIT1Q86X76 327 aa11.1□□□□□ -0.63
TRAPPC3-207ENST00000497251 TRBV10-1A0A0K0K1A3 114 aa11.09□□□□□ -0.63
TRAPPC3-207ENST00000497251 RBFOX3A6NFN3 312 aa11.09□□□□□ -0.63
TRAPPC3-207ENST00000497251 Q0VG73 95 aa11.09□□□□□ -0.63
TRAPPC3-207ENST00000497251 WFDC2Q14508 124 aa11.09□□□□□ -0.63
TRAPPC3-207ENST00000497251 LINC01559Q495D7 138 aa11.09□□□□□ -0.63
TRAPPC3-207ENST00000497251 C14orf177Q52M58 125 aa11.09□□□□□ -0.63
TRAPPC3-207ENST00000497251 SERTAD4-AS1Q5TG53 156 aa11.09□□□□□ -0.63
TRAPPC3-207ENST00000497251 hCG_2014768A0A024R1R8 64 aa11.08□□□□□ -0.64
TRAPPC3-207ENST00000497251 CCL20P78556 96 aa11.08□□□□□ -0.64
TRAPPC3-207ENST00000497251 C11orf52Q96A22 123 aa11.08□□□□□ -0.64
TRAPPC3-207ENST00000497251 CHAC1Q9BUX1 264 aa11.08□□□□□ -0.64
TRAPPC3-207ENST00000497251 MLST8Q9BVC4 326 aa11.08□□□□□ -0.64
TRAPPC3-207ENST00000497251 GNG13Q9P2W3 67 aa11.08□□□□□ -0.64
TRAPPC3-207ENST00000497251 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.07□□□□□ -0.64
TRAPPC3-207ENST00000497251 A0A087WX48 190 aa11.07□□□□□ -0.64
TRAPPC3-207ENST00000497251 M0R036 132 aa11.07□□□□□ -0.64
TRAPPC3-207ENST00000497251 DMRTA1Q5VZB9 504 aa11.07□□□□□ -0.64
TRAPPC3-207ENST00000497251 ATRAIDQ6UW56 229 aa11.07□□□□□ -0.64
TRAPPC3-207ENST00000497251 BAGE2Q86Y30 109 aa11.07□□□□□ -0.64
TRAPPC3-207ENST00000497251 C9orf62Q8N4C0 152 aa11.07□□□□□ -0.64
TRAPPC3-207ENST00000497251 BAALCQ8WXS3 180 aa11.07□□□□□ -0.64
TRAPPC3-207ENST00000497251 H3BVH4 76 aa11.06□□□□□ -0.64
TRAPPC3-207ENST00000497251 LECT2O14960 151 aa11.06□□□□□ -0.64
TRAPPC3-207ENST00000497251 OXTP01178 125 aa11.06□□□□□ -0.64
TRAPPC3-207ENST00000497251 ARMS2P0C7Q2 107 aa11.06□□□□□ -0.64
TRAPPC3-207ENST00000497251 Q8N3U1 123 aa11.06□□□□□ -0.64
TRAPPC3-207ENST00000497251 C14orf178Q8N769 122 aaPredicted RBP11.06□□□□□ -0.64
TRAPPC3-207ENST00000497251 SFRP2Q96HF1 295 aa11.06□□□□□ -0.64
TRAPPC3-207ENST00000497251 SAMD10Q9BYL1 202 aa11.06□□□□□ -0.64
TRAPPC3-207ENST00000497251 PHLDA3Q9Y5J5 127 aa11.06□□□□□ -0.64
TRAPPC3-207ENST00000497251 IGKV2D-24A0A075B6R9 120 aa11.05□□□□□ -0.64
TRAPPC3-207ENST00000497251 IFNA1P01562 189 aa11.05□□□□□ -0.64
TRAPPC3-207ENST00000497251 CXCL1P09341 107 aa11.05□□□□□ -0.64
TRAPPC3-207ENST00000497251 PKIAP61925 76 aa11.05□□□□□ -0.64
TRAPPC3-207ENST00000497251 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
TRAPPC3-207ENST00000497251 SCXQ7RTU7 201 aa11.05□□□□□ -0.64
TRAPPC3-207ENST00000497251 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
TRAPPC3-207ENST00000497251 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
TRAPPC3-207ENST00000497251 GRIFINA4D1Z8 144 aa11.04□□□□□ -0.64
TRAPPC3-207ENST00000497251 PDE6DO43924 150 aa11.04□□□□□ -0.64
TRAPPC3-207ENST00000497251 RPL35P42766 123 aaKnown RBP11.04□□□□□ -0.64
TRAPPC3-207ENST00000497251 MEF2BQ02080 365 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC3-207ENST00000497251 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.04□□□□□ -0.64
TRAPPC3-207ENST00000497251 JPT2Q9H910 190 aa11.04□□□□□ -0.64
TRAPPC3-207ENST00000497251 KLK12Q9UKR0 248 aa11.04□□□□□ -0.64
TRAPPC3-207ENST00000497251 IGLV2-8P01709 118 aa11.03□□□□□ -0.64
TRAPPC3-207ENST00000497251 TAGLN2P37802 199 aaKnown RBP11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms