RNA–Protein interactions for RNA: ENST00000496622.1

SSBP1-213, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 1 (best)

Gene SSBP1, Length 2,620 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-213ENST00000496622 PMVKQ15126 192 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 Q71RC1 249 aaPredicted RBP4.74□□□□□ -1.65
SSBP1-213ENST00000496622 C11orf44Q8N8P7 122 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 DPH3Q96FX2 82 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 FAM167A-AS1Q96KT0 104 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 C17orf77Q96MU5 243 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 SLC25A2Q9BXI2 301 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 SPANXCQ9NY87 97 aa4.74□□□□□ -1.65
SSBP1-213ENST00000496622 TMEM262E9PQX1 116 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 INS-IGF2F8WCM5 200 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 H3BUX3 64 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 DUSP14O95147 198 aaKnown RBP4.73□□□□□ -1.65
SSBP1-213ENST00000496622 CSN1S1P47710 185 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 TAS2R45P59539 299 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 RPL23P62829 140 aaKnown RBP4.73□□□□□ -1.65
SSBP1-213ENST00000496622 MINOS1Q5TGZ0 78 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 C10orf113Q5VZT2 155 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 WFDC11Q8NEX6 87 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 MINOS1-NBL1R4GNA1 71 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 AKAP9Q99996 3911 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 IGHV3-49A0A0A0MS15 119 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 IGHV3-66A0A0C4DH42 116 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 UBE2L3P68036 154 aaKnown RBP4.73□□□□□ -1.65
SSBP1-213ENST00000496622 ZNF329Q86UD4 541 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 SGMS2Q8NHU3 365 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 GTSF1Q8WW33 167 aa4.73□□□□□ -1.65
SSBP1-213ENST00000496622 B4DSR2 109 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 IL4P05112 153 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 UBE2G1P62253 170 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 EBI3Q14213 229 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 C15orf32Q32M92 178 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 EBLN2Q6P2I7 272 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 C10orf99Q6UWK7 81 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 C3orf22Q8N5N4 141 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 RNF5Q99942 180 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 KCNIP2Q9NS61 270 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 A0A096LNT2 108 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 IGHV4-59P01825 116 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 SMIM13P0DJ93 91 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 IGFL4Q6B9Z1 124 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 AMTNQ6UX39 209 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 LINC01561Q8N1V8 128 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 KLF12Q9Y4X4 402 aa4.72□□□□□ -1.65
SSBP1-213ENST00000496622 SORL1Q92673 2214 aa4.71□□□□□ -1.65
SSBP1-213ENST00000496622 IGLV11-55A0A075B6I3 123 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 RBAKDNA6NC62 111 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 FRMD6-AS1P0C7T7 363 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 ZNF688P0C7X2 276 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 SRSF9Q13242 221 aaKnown RBP eCLIP4.71□□□□□ -1.66
SSBP1-213ENST00000496622 GAGE2AQ6NT46 116 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 PRIMA1Q86XR5 153 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 C5orf56Q8N8D9 126 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 THAP8Q8NA92 274 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 DLX4Q92988 240 aaPredicted RBP4.71□□□□□ -1.66
SSBP1-213ENST00000496622 KLK15Q9H2R5 256 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 TRAV8-1A0A0A6YYK1 113 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 IGHV3-11P01762 117 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 CTSGP08311 255 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 FGF6P10767 208 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 PMAIP1Q13794 54 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 DEFB113Q30KQ7 82 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 DEFB112Q30KQ8 113 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 PVRIGQ6DKI7 326 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 CLEC19AQ6UXS0 136 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 TMEM136Q6ZRR5 245 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 ZNF491Q8N8L2 437 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 TSKUQ8WUA8 353 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 PPDPFLQ8WWR9 84 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 PMCHL2Q9BQD1 86 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 PAXXQ9BUH6 204 aa4.71□□□□□ -1.66
SSBP1-213ENST00000496622 NOTCH3Q9UM47 2321 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 OVOL1O14753 267 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 SPINK4O60575 86 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 TRBV12-3P01733 135 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 COX8AP10176 69 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 FOXA3P55318 350 aaPredicted RBP4.7□□□□□ -1.66
SSBP1-213ENST00000496622 PQLC2Q6ZP29 291 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 FXYD5Q96DB9 178 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 FAM19A4Q96LR4 140 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 TMEM191AQ9H0A3 160 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 RABAC1Q9UI14 185 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 HIVEP2P31629 2446 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 M0R3E3 92 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 CHEK1O14757 476 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 LGALS1P09382 135 aaKnown RBP4.7□□□□□ -1.66
SSBP1-213ENST00000496622 LINC00526Q96FQ7 95 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 TRGV9Q99603 122 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 Q9UF83 564 aa4.7□□□□□ -1.66
SSBP1-213ENST00000496622 PGPA6NDG6 321 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 C2orf70A6NJV1 201 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 M0R2P5 195 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 UQCRQO14949 82 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 PLEKHB2Q96CS7 222 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 DSCR8Q96T75 97 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 E9PLD3 99 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 H7C1H1 209 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 P01737 135 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 IGHV4-31P0DP07 118 aa4.69□□□□□ -1.66
SSBP1-213ENST00000496622 MGST1P10620 155 aaKnown RBP4.69□□□□□ -1.66
SSBP1-213ENST00000496622 GCSHP23434 173 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 121.1 ms