RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 ASIPP42127 132 aa9.89□□□□□ -0.83
CXCL12-208ENST00000496375 GNG4P50150 75 aa9.89□□□□□ -0.83
CXCL12-208ENST00000496375 PARLQ9H300 379 aa9.89□□□□□ -0.83
CXCL12-208ENST00000496375 TMEM242Q9NWH2 141 aa9.89□□□□□ -0.83
CXCL12-208ENST00000496375 TRAV4A0A0B4J268 109 aa9.88□□□□□ -0.83
CXCL12-208ENST00000496375 C19orf71A6NCJ1 209 aa9.88□□□□□ -0.83
CXCL12-208ENST00000496375 ZNF727A8MUV8 499 aa9.88□□□□□ -0.83
CXCL12-208ENST00000496375 TMEM241Q24JQ0 296 aa9.88□□□□□ -0.83
CXCL12-208ENST00000496375 CTDSP1Q9GZU7 261 aa9.88□□□□□ -0.83
CXCL12-208ENST00000496375 BIN3Q9NQY0 253 aa9.88□□□□□ -0.83
CXCL12-208ENST00000496375 NAT8Q9UHE5 227 aa9.88□□□□□ -0.83
CXCL12-208ENST00000496375 C1orf196B1AJZ1 125 aa9.87□□□□□ -0.83
CXCL12-208ENST00000496375 CIDEAO60543 219 aa9.87□□□□□ -0.83
CXCL12-208ENST00000496375 BTF3P20290 206 aaKnown RBP9.87□□□□□ -0.83
CXCL12-208ENST00000496375 KRTAP10-2P60368 255 aa9.87□□□□□ -0.83
CXCL12-208ENST00000496375 RAB5BP61020 215 aa9.87□□□□□ -0.83
CXCL12-208ENST00000496375 FHL2Q14192 279 aa9.87□□□□□ -0.83
CXCL12-208ENST00000496375 ZNF876PQ49A33 203 aa9.87□□□□□ -0.83
CXCL12-208ENST00000496375 SMIM7Q9BQ49 75 aa9.87□□□□□ -0.83
CXCL12-208ENST00000496375 LY96Q9Y6Y9 160 aa9.87□□□□□ -0.83
CXCL12-208ENST00000496375 PGPEP1LA6NFU8 196 aa9.86□□□□□ -0.83
CXCL12-208ENST00000496375 RS1O15537 224 aa9.86□□□□□ -0.83
CXCL12-208ENST00000496375 PAX4O43316 350 aa9.86□□□□□ -0.83
CXCL12-208ENST00000496375 IGHV3-53P01767 116 aa9.86□□□□□ -0.83
CXCL12-208ENST00000496375 S100A4P26447 101 aaKnown RBP9.86□□□□□ -0.83
CXCL12-208ENST00000496375 LINC00315P59091 139 aa9.86□□□□□ -0.83
CXCL12-208ENST00000496375 SLAQ13239 276 aa9.86□□□□□ -0.83
CXCL12-208ENST00000496375 SSBP4Q9BWG4 385 aaPredicted RBP9.86□□□□□ -0.83
CXCL12-208ENST00000496375 ICOSQ9Y6W8 199 aa9.86□□□□□ -0.83
CXCL12-208ENST00000496375 H3BVH4 76 aa9.85□□□□□ -0.83
CXCL12-208ENST00000496375 SNAI2O43623 268 aa9.85□□□□□ -0.83
CXCL12-208ENST00000496375 NXPH4O95158 308 aa9.85□□□□□ -0.83
CXCL12-208ENST00000496375 ARMS2P0C7Q2 107 aa9.85□□□□□ -0.83
CXCL12-208ENST00000496375 RAB5AP20339 215 aa9.85□□□□□ -0.83
CXCL12-208ENST00000496375 PRR27Q6MZM9 219 aa9.85□□□□□ -0.83
CXCL12-208ENST00000496375 ZNF479Q96JC4 524 aa9.85□□□□□ -0.83
CXCL12-208ENST00000496375 PRO0255Q9UI72 69 aa9.85□□□□□ -0.83
CXCL12-208ENST00000496375 GRIFINA4D1Z8 144 aa9.84□□□□□ -0.83
CXCL12-208ENST00000496375 K7EN84 100 aa9.84□□□□□ -0.83
CXCL12-208ENST00000496375 SIVA1O15304 175 aa9.84□□□□□ -0.83
CXCL12-208ENST00000496375 OR5AL1P0C617 328 aa9.84□□□□□ -0.83
CXCL12-208ENST00000496375 CRYBA4P53673 196 aa9.84□□□□□ -0.83
CXCL12-208ENST00000496375 RPL19P84098 196 aaKnown RBP9.84□□□□□ -0.83
CXCL12-208ENST00000496375 CFAP126Q5VTH2 177 aa9.84□□□□□ -0.83
CXCL12-208ENST00000496375 Q8N1X5 172 aa9.84□□□□□ -0.83
CXCL12-208ENST00000496375 OCC1Q8TAD7 63 aa9.84□□□□□ -0.83
CXCL12-208ENST00000496375 YPEL4Q96NS1 127 aa9.84□□□□□ -0.83
CXCL12-208ENST00000496375 A8MWV9 139 aa9.83□□□□□ -0.84
CXCL12-208ENST00000496375 IGLC6P0CF74 106 aa9.83□□□□□ -0.84
CXCL12-208ENST00000496375 MGST1P10620 155 aaKnown RBP9.83□□□□□ -0.84
CXCL12-208ENST00000496375 RPS20P60866 119 aaKnown RBP9.83□□□□□ -0.84
CXCL12-208ENST00000496375 ZFP2Q6ZN57 461 aa9.83□□□□□ -0.84
CXCL12-208ENST00000496375 Q6ZRN7 208 aaPredicted RBP9.83□□□□□ -0.84
CXCL12-208ENST00000496375 OR4C5Q8NGB2 326 aa9.83□□□□□ -0.84
CXCL12-208ENST00000496375 ISOC2Q96AB3 205 aa9.83□□□□□ -0.84
CXCL12-208ENST00000496375 TMSB15BA0A087X1C1 80 aa9.82□□□□□ -0.84
CXCL12-208ENST00000496375 GATA1P15976 413 aaPredicted RBP9.82□□□□□ -0.84
CXCL12-208ENST00000496375 UFSP1Q6NVU6 142 aa9.82□□□□□ -0.84
CXCL12-208ENST00000496375 FAM231DQ6ZW35 169 aa9.82□□□□□ -0.84
CXCL12-208ENST00000496375 SYT8Q8NBV8 401 aa9.82□□□□□ -0.84
CXCL12-208ENST00000496375 ANAPC16Q96DE5 110 aa9.82□□□□□ -0.84
CXCL12-208ENST00000496375 HHLA3Q9XRX5 114 aa9.82□□□□□ -0.84
CXCL12-208ENST00000496375 TRGV4A0A0C4DH28 118 aa9.81□□□□□ -0.84
CXCL12-208ENST00000496375 P01737 135 aa9.81□□□□□ -0.84
CXCL12-208ENST00000496375 ELOBQ15370 118 aa9.81□□□□□ -0.84
CXCL12-208ENST00000496375 DMRTA1Q5VZB9 504 aa9.81□□□□□ -0.84
CXCL12-208ENST00000496375 LYPD5Q6UWN5 251 aa9.81□□□□□ -0.84
CXCL12-208ENST00000496375 ZFP82Q8N141 532 aa9.81□□□□□ -0.84
CXCL12-208ENST00000496375 NUDT10Q8NFP7 164 aa9.81□□□□□ -0.84
CXCL12-208ENST00000496375 DAZAP1Q96EP5 407 aaKnown RBP9.81□□□□□ -0.84
CXCL12-208ENST00000496375 NUDT11Q96G61 164 aa9.81□□□□□ -0.84
CXCL12-208ENST00000496375 SFRP2Q96HF1 295 aa9.81□□□□□ -0.84
CXCL12-208ENST00000496375 PHLDA3Q9Y5J5 127 aa9.81□□□□□ -0.84
CXCL12-208ENST00000496375 FAT1Q14517 4588 aa9.81□□□□□ -0.84
CXCL12-208ENST00000496375 TRBV6-4A0A1B0GX49 114 aa9.8□□□□□ -0.84
CXCL12-208ENST00000496375 PPP1R2P9O14990 202 aa9.8□□□□□ -0.84
CXCL12-208ENST00000496375 RPL23P62829 140 aaKnown RBP9.8□□□□□ -0.84
CXCL12-208ENST00000496375 ADIRFQ15847 76 aa9.8□□□□□ -0.84
CXCL12-208ENST00000496375 MRPL23Q16540 153 aaKnown RBP9.8□□□□□ -0.84
CXCL12-208ENST00000496375 LINC01551Q86U37 167 aa9.8□□□□□ -0.84
CXCL12-208ENST00000496375 OR2D3Q8NGH3 330 aa9.8□□□□□ -0.84
CXCL12-208ENST00000496375 VPS13BQ7Z7G8 4022 aa9.8□□□□□ -0.84
CXCL12-208ENST00000496375 XKRY2A2RUG3 117 aa9.79□□□□□ -0.84
CXCL12-208ENST00000496375 RHODO00212 210 aa9.79□□□□□ -0.84
CXCL12-208ENST00000496375 S100A6P06703 90 aa9.79□□□□□ -0.84
CXCL12-208ENST00000496375 S100PP25815 95 aa9.79□□□□□ -0.84
CXCL12-208ENST00000496375 CT83Q5H943 113 aa9.79□□□□□ -0.84
CXCL12-208ENST00000496375 NEGR1Q7Z3B1 354 aa9.79□□□□□ -0.84
CXCL12-208ENST00000496375 OR10AG1Q8NH19 301 aa9.79□□□□□ -0.84
CXCL12-208ENST00000496375 BTF3L4Q96K17 158 aa9.79□□□□□ -0.84
CXCL12-208ENST00000496375 TNFRSF18Q9Y5U5 241 aa9.79□□□□□ -0.84
CXCL12-208ENST00000496375 TRBV24-1A0A075B6N3 115 aa9.78□□□□□ -0.84
CXCL12-208ENST00000496375 CRYGDP07320 174 aa9.78□□□□□ -0.84
CXCL12-208ENST00000496375 FUSP35637 526 aaKnown RBP eCLIP9.78□□□□□ -0.84
CXCL12-208ENST00000496375 CTRLP40313 264 aa9.78□□□□□ -0.84
CXCL12-208ENST00000496375 RPS10P46783 165 aaKnown RBP9.78□□□□□ -0.84
CXCL12-208ENST00000496375 ERVFC1-1P60608 527 aa9.78□□□□□ -0.84
CXCL12-208ENST00000496375 CNFNQ9BYD5 112 aa9.78□□□□□ -0.84
CXCL12-208ENST00000496375 RNASE7Q9H1E1 156 aaKnown RBP9.78□□□□□ -0.84
CXCL12-208ENST00000496375 RPP21Q9H633 154 aaKnown RBP9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms