RNA–Protein interactions for RNA: ENST00000495981.5

VPS52-222, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 1 (best)

Gene VPS52, Length 743 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-222ENST00000495981 RLN2P04090 185 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 SLC25A6P12236 298 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 FGF8P55075 233 aaPredicted RBP2.82□□□□□ -1.96
VPS52-222ENST00000495981 CCL18P55774 89 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 DEFA1P59665 94 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 DEFA3P59666 94 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 RAB2AP61019 212 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 HIST1H1AQ02539 215 aaPredicted RBP2.82□□□□□ -1.96
VPS52-222ENST00000495981 REG3AQ06141 175 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 C11orf72Q8NBR9 251 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 OR1S1Q8NH92 325 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 TYMSOSQ8TAI1 123 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 DYNC2LI1Q8TCX1 351 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 RXFP4Q8TDU9 374 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 C15orf40Q8WUR7 153 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 BAALCQ8WXS3 180 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 HYLS1Q96M11 299 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 GPR82Q96P67 336 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 RSG1Q9BU20 258 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 TMEM147Q9BVK8 224 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 MAP1LC3CQ9BXW4 147 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 NOP10Q9NPE3 64 aaKnown RBP2.82□□□□□ -1.96
VPS52-222ENST00000495981 ZNF586Q9NXT0 402 aa2.82□□□□□ -1.96
VPS52-222ENST00000495981 A0A096LPF7 62 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 FABP12A6NFH5 140 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 CFDP00746 253 aaPredicted RBP2.81□□□□□ -1.96
VPS52-222ENST00000495981 LINC00869P0C866 280 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 CHTF8P0CG12 524 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 IGLC2P0DOY2 106 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 ZNF25P17030 456 aaPredicted RBP2.81□□□□□ -1.96
VPS52-222ENST00000495981 AKR1C4P17516 323 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 RPL7P18124 248 aaKnown RBP2.81□□□□□ -1.96
VPS52-222ENST00000495981 ORM2P19652 201 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 CXCL2P19875 107 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 RAB5BP61020 215 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 AKR1C1Q04828 323 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 SLC38A11Q08AI6 406 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 PPP1R1AQ13522 171 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 CLINT1Q14677 625 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 KIAA0087Q14695 138 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 ESRGQ1W209 222 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 LELP1Q5T871 98 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 PATE2Q6UY27 113 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 CYP2G1PQ6ZSU1 146 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 Q6ZTI0 123 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 TMEM144Q7Z5S9 345 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 CEND1Q8N111 149 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 OR10J6PQ8NGY7 276 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 GNPNAT1Q96EK6 184 aaPredicted RBP2.81□□□□□ -1.96
VPS52-222ENST00000495981 ODF3Q96PU9 254 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 C20orf144Q9BQM9 153 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 SLIRPQ9GZT3 109 aaKnown RBP2.81□□□□□ -1.96
VPS52-222ENST00000495981 ZNF331Q9NQX6 463 aaPredicted RBP2.81□□□□□ -1.96
VPS52-222ENST00000495981 TIMM8BQ9Y5J9 83 aaPredicted RBP2.81□□□□□ -1.96
VPS52-222ENST00000495981 V9GYH0 126 aa2.81□□□□□ -1.96
VPS52-222ENST00000495981 A0A087WTM6 91 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 A0A0J9YY99 117 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 H7BYZ3 331 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 SYNGR2O43760 224 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 GAS8-AS1O95177 125 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 DAZ2Q13117 558 aaKnown RBP2.8□□□□□ -1.96
VPS52-222ENST00000495981 VAMP3Q15836 100 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 TMEM128Q5BJH2 165 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 PRR9Q5T870 116 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 LCN15Q6UWW0 184 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 TMEM14EPQ6UXP3 125 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 ZNF493Q6ZR52 646 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 LINC00173Q6ZV60 143 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 TMED4Q7Z7H5 227 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 FAM19A4Q96LR4 140 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 CIB3Q96Q77 187 aaPredicted RBP2.8□□□□□ -1.96
VPS52-222ENST00000495981 LINC00467Q9BRT7 94 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 SLC50A1Q9BRV3 221 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 FLVCR2Q9UPI3 526 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 HIGD1AQ9Y241 93 aa2.8□□□□□ -1.96
VPS52-222ENST00000495981 PIGBOS1A0A0B4J2F0 54 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 KLLNB2CW77 178 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 FNDC10F2Z333 226 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 H3BQ15 152 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 SSSCA1O60232 199 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 HYPMO75409 117 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 HSBP1O75506 76 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 ADAP1O75689 374 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 SFT2D2O95562 160 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 MT1HL1P0DM35 61 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 TCL1AP56279 114 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 KRTAP10-4P60372 401 aaPredicted RBP2.79□□□□□ -1.96
VPS52-222ENST00000495981 ATP6V1FQ16864 119 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 SPANXN5Q5MJ07 72 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 DIRAS2Q96HU8 199 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 LINC01587Q99440 93 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 MGST2Q99735 147 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 CCDC32Q9BV29 185 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 ARV1Q9H2C2 271 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 GSKIPQ9P0R6 139 aa2.79□□□□□ -1.96
VPS52-222ENST00000495981 TRAV12-3A0A0B4J271 114 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 A0A0J9YXY3 114 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 C7orf71A4D174 169 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 LRCOL1A6NCL2 159 aa2.78□□□□□ -1.96
VPS52-222ENST00000495981 M0R143 59 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms