RNA–Protein interactions for RNA: ENST00000495953.2

RAPGEF3-215, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

TSL 3

Gene RAPGEF3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-215ENST00000495953 CEMP1Q6PRD7 247 aaPredicted RBP10.9□□□□□ -0.66
RAPGEF3-215ENST00000495953 NUP35Q8NFH5 326 aa10.9□□□□□ -0.66
RAPGEF3-215ENST00000495953 ZNF479Q96JC4 524 aa10.9□□□□□ -0.66
RAPGEF3-215ENST00000495953 AP1S3Q96PC3 154 aa10.9□□□□□ -0.66
RAPGEF3-215ENST00000495953 KLK5Q9Y337 293 aaPredicted RBP10.9□□□□□ -0.66
RAPGEF3-215ENST00000495953 TRGV4A0A0C4DH28 118 aa10.89□□□□□ -0.67
RAPGEF3-215ENST00000495953 MUC21A0A0G2JKD1 596 aa10.89□□□□□ -0.67
RAPGEF3-215ENST00000495953 MUC21A0A140T8X8 626 aa10.89□□□□□ -0.67
RAPGEF3-215ENST00000495953 A0A1B0GW15 77 aa10.89□□□□□ -0.67
RAPGEF3-215ENST00000495953 C7orf77A4D0Y5 90 aa10.89□□□□□ -0.67
RAPGEF3-215ENST00000495953 IGHV3-53P01767 116 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 CRYGDP07320 174 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 SMIM17P0DL12 118 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 HOXA5P20719 270 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 TCTAP57738 103 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 RIGQ13278 110 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 FHL2Q14192 279 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 TWIST1Q15672 202 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 UFSP1Q6NVU6 142 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 SMIM15Q7Z3B0 74 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 JPT2Q9H910 190 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 PRO0255Q9UI72 69 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 RYR2Q92736 4967 aa10.88□□□□□ -0.67
RAPGEF3-215ENST00000495953 TENM2Q9NT68 2774 aa10.87□□□□□ -0.67
RAPGEF3-215ENST00000495953 H3BNG1 76 aa10.87□□□□□ -0.67
RAPGEF3-215ENST00000495953 SSTP61278 116 aa10.87□□□□□ -0.67
RAPGEF3-215ENST00000495953 KCNIP4Q6PIL6 250 aa10.87□□□□□ -0.67
RAPGEF3-215ENST00000495953 RPS10P5Q9NQ39 176 aa10.87□□□□□ -0.67
RAPGEF3-215ENST00000495953 MSRB1Q9NZV6 116 aa10.87□□□□□ -0.67
RAPGEF3-215ENST00000495953 HHLA3Q9XRX5 114 aa10.87□□□□□ -0.67
RAPGEF3-215ENST00000495953 TRAV9-1A0A075B6T8 112 aa10.86□□□□□ -0.67
RAPGEF3-215ENST00000495953 TRBV6-4A0A1B0GX49 114 aa10.86□□□□□ -0.67
RAPGEF3-215ENST00000495953 GATA1P15976 413 aaPredicted RBP10.86□□□□□ -0.67
RAPGEF3-215ENST00000495953 ATP5L2Q7Z4Y8 100 aa10.86□□□□□ -0.67
RAPGEF3-215ENST00000495953 C14orf178Q8N769 122 aaPredicted RBP10.86□□□□□ -0.67
RAPGEF3-215ENST00000495953 SAMD10Q9BYL1 202 aa10.86□□□□□ -0.67
RAPGEF3-215ENST00000495953 DPH3P1Q9H4G8 78 aa10.86□□□□□ -0.67
RAPGEF3-215ENST00000495953 S100A8P05109 93 aa10.85□□□□□ -0.67
RAPGEF3-215ENST00000495953 S100PP25815 95 aa10.85□□□□□ -0.67
RAPGEF3-215ENST00000495953 CRYBA4P53673 196 aa10.85□□□□□ -0.67
RAPGEF3-215ENST00000495953 FAM74A4Q5TZK3 123 aa10.85□□□□□ -0.67
RAPGEF3-215ENST00000495953 C15orf53Q8NAA6 179 aa10.85□□□□□ -0.67
RAPGEF3-215ENST00000495953 KIF25-AS1Q9Y6Z4 181 aa10.85□□□□□ -0.67
RAPGEF3-215ENST00000495953 TRAV26-1A0A087WT03 109 aa10.84□□□□□ -0.67
RAPGEF3-215ENST00000495953 A0A087WWL8 130 aa10.84□□□□□ -0.67
RAPGEF3-215ENST00000495953 IGLL5B9A064 214 aa10.84□□□□□ -0.67
RAPGEF3-215ENST00000495953 PAX4O43316 350 aa10.84□□□□□ -0.67
RAPGEF3-215ENST00000495953 FAM3BP58499 235 aaPredicted RBP10.84□□□□□ -0.67
RAPGEF3-215ENST00000495953 RAB4BP61018 213 aa10.84□□□□□ -0.67
RAPGEF3-215ENST00000495953 BTF3L4Q96K17 158 aa10.84□□□□□ -0.67
RAPGEF3-215ENST00000495953 LYSTQ99698 3801 aa10.84□□□□□ -0.67
RAPGEF3-215ENST00000495953 TMEM191AQ9H0A3 160 aa10.84□□□□□ -0.67
RAPGEF3-215ENST00000495953 PLECQ15149 4684 aaKnown RBP10.84□□□□□ -0.67
RAPGEF3-215ENST00000495953 IGHV3-73A0A0B4J1V6 119 aa10.83□□□□□ -0.68
RAPGEF3-215ENST00000495953 EVI2AP22794 236 aa10.83□□□□□ -0.68
RAPGEF3-215ENST00000495953 RHOHQ15669 191 aa10.83□□□□□ -0.68
RAPGEF3-215ENST00000495953 TMEM88Q6PEY1 159 aa10.83□□□□□ -0.68
RAPGEF3-215ENST00000495953 FRZBQ92765 325 aa10.83□□□□□ -0.68
RAPGEF3-215ENST00000495953 LINC00315P59091 139 aa10.82□□□□□ -0.68
RAPGEF3-215ENST00000495953 HBBP68871 147 aa10.82□□□□□ -0.68
RAPGEF3-215ENST00000495953 ZNF56Q15929 161 aa10.82□□□□□ -0.68
RAPGEF3-215ENST00000495953 SLC25A29Q8N8R3 303 aa10.82□□□□□ -0.68
RAPGEF3-215ENST00000495953 PRADC1Q9BSG0 188 aa10.82□□□□□ -0.68
RAPGEF3-215ENST00000495953 A0A1B0GXF2 115 aa10.81□□□□□ -0.68
RAPGEF3-215ENST00000495953 F5H697 171 aa10.81□□□□□ -0.68
RAPGEF3-215ENST00000495953 H7C1H1 209 aa10.81□□□□□ -0.68
RAPGEF3-215ENST00000495953 K7EQD1 137 aa10.81□□□□□ -0.68
RAPGEF3-215ENST00000495953 MRPL54Q6P161 138 aaKnown RBP10.81□□□□□ -0.68
RAPGEF3-215ENST00000495953 RASL11AQ6T310 242 aa10.81□□□□□ -0.68
RAPGEF3-215ENST00000495953 VSIG2Q96IQ7 327 aa10.81□□□□□ -0.68
RAPGEF3-215ENST00000495953 A0A0J9YY99 117 aa10.8□□□□□ -0.68
RAPGEF3-215ENST00000495953 TRBV10-1A0A0K0K1A3 114 aa10.8□□□□□ -0.68
RAPGEF3-215ENST00000495953 MGPP08493 103 aa10.8□□□□□ -0.68
RAPGEF3-215ENST00000495953 MRPL23Q16540 153 aaKnown RBP10.8□□□□□ -0.68
RAPGEF3-215ENST00000495953 GATD1Q8NB37 220 aa10.8□□□□□ -0.68
RAPGEF3-215ENST00000495953 ICOSQ9Y6W8 199 aa10.8□□□□□ -0.68
RAPGEF3-215ENST00000495953 CAMPP49913 170 aa10.79□□□□□ -0.68
RAPGEF3-215ENST00000495953 Q6ZSN1 163 aa10.79□□□□□ -0.68
RAPGEF3-215ENST00000495953 SH2D6Q7Z4S9 175 aa10.79□□□□□ -0.68
RAPGEF3-215ENST00000495953 APLNQ9ULZ1 77 aa10.79□□□□□ -0.68
RAPGEF3-215ENST00000495953 HYDINQ4G0P3 5121 aa10.78□□□□□ -0.68
RAPGEF3-215ENST00000495953 LCE6AA0A183 80 aa10.78□□□□□ -0.68
RAPGEF3-215ENST00000495953 GYPEP15421 78 aa10.78□□□□□ -0.68
RAPGEF3-215ENST00000495953 COX19Q49B96 90 aa10.78□□□□□ -0.68
RAPGEF3-215ENST00000495953 ALMS1Q8TCU4 4167 aa10.78□□□□□ -0.68
RAPGEF3-215ENST00000495953 DNAH1Q9P2D7 4330 aa10.77□□□□□ -0.69
RAPGEF3-215ENST00000495953 NUDT3O95989 172 aa10.77□□□□□ -0.69
RAPGEF3-215ENST00000495953 FAM104BQ5XKR9 115 aa10.77□□□□□ -0.69
RAPGEF3-215ENST00000495953 ATRAIDQ6UW56 229 aa10.77□□□□□ -0.69
RAPGEF3-215ENST00000495953 URGCP-MRPS24S4R325 110 aa10.77□□□□□ -0.69
RAPGEF3-215ENST00000495953 A0A096LPF7 62 aa10.76□□□□□ -0.69
RAPGEF3-215ENST00000495953 M0QY20 66 aa10.76□□□□□ -0.69
RAPGEF3-215ENST00000495953 RAB4AP20338 218 aa10.76□□□□□ -0.69
RAPGEF3-215ENST00000495953 S100A1P23297 94 aa10.76□□□□□ -0.69
RAPGEF3-215ENST00000495953 SRIP30626 198 aa10.76□□□□□ -0.69
RAPGEF3-215ENST00000495953 RPL36AP83881 106 aaKnown RBP10.76□□□□□ -0.69
RAPGEF3-215ENST00000495953 SUMO4Q6EEV6 95 aa10.76□□□□□ -0.69
RAPGEF3-215ENST00000495953 RPL36ALQ969Q0 106 aaKnown RBP10.76□□□□□ -0.69
RAPGEF3-215ENST00000495953 MRAP2Q96G30 205 aa10.76□□□□□ -0.69
RAPGEF3-215ENST00000495953 DNAJC30Q96LL9 226 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms