RNA–Protein interactions for RNA: ENST00000495680.2

SHROOM1-206, Transcript of shroom family member 1, humanhuman

TSL 3

Gene SHROOM1, Length 281 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-206ENST00000495680 HNRNPA3P51991 378 aaKnown RBP7.83□□□□□ -1.16
SHROOM1-206ENST00000495680 RMI2Q96E14 147 aa7.83□□□□□ -1.16
SHROOM1-206ENST00000495680 AQP10Q96PS8 301 aa7.83□□□□□ -1.16
SHROOM1-206ENST00000495680 ACTR3CQ9C0K3 210 aaPredicted RBP7.83□□□□□ -1.16
SHROOM1-206ENST00000495680 COX11Q9Y6N1 276 aa7.83□□□□□ -1.16
SHROOM1-206ENST00000495680 TMSB15BA0A087X1C1 80 aa7.82□□□□□ -1.16
SHROOM1-206ENST00000495680 RHODO00212 210 aa7.82□□□□□ -1.16
SHROOM1-206ENST00000495680 PEX7O00628 323 aa7.82□□□□□ -1.16
SHROOM1-206ENST00000495680 SH2D1AO60880 128 aa7.82□□□□□ -1.16
SHROOM1-206ENST00000495680 IFNA7P01567 189 aa7.82□□□□□ -1.16
SHROOM1-206ENST00000495680 MBP02144 154 aa7.82□□□□□ -1.16
SHROOM1-206ENST00000495680 SERF2P84101 59 aa7.82□□□□□ -1.16
SHROOM1-206ENST00000495680 DNLZQ5SXM8 178 aa7.82□□□□□ -1.16
SHROOM1-206ENST00000495680 ATRAIDQ6UW56 229 aa7.82□□□□□ -1.16
SHROOM1-206ENST00000495680 OR11H4Q8NGC9 324 aa7.82□□□□□ -1.16
SHROOM1-206ENST00000495680 TNFSF18Q9UNG2 199 aa7.82□□□□□ -1.16
SHROOM1-206ENST00000495680 M0R381 172 aa7.81□□□□□ -1.16
SHROOM1-206ENST00000495680 IGLV2-8P01709 118 aa7.81□□□□□ -1.16
SHROOM1-206ENST00000495680 DEFA1P59665 94 aa7.81□□□□□ -1.16
SHROOM1-206ENST00000495680 DEFA3P59666 94 aa7.81□□□□□ -1.16
SHROOM1-206ENST00000495680 UBE2D3P61077 147 aa7.81□□□□□ -1.16
SHROOM1-206ENST00000495680 UBE2D2P62837 147 aa7.81□□□□□ -1.16
SHROOM1-206ENST00000495680 RPL7L1Q6DKI1 246 aaKnown RBP7.81□□□□□ -1.16
SHROOM1-206ENST00000495680 ENHOQ6UWT2 76 aa7.81□□□□□ -1.16
SHROOM1-206ENST00000495680 SYT8Q8NBV8 401 aa7.81□□□□□ -1.16
SHROOM1-206ENST00000495680 SFRP2Q96HF1 295 aa7.81□□□□□ -1.16
SHROOM1-206ENST00000495680 A0A087WX48 190 aa7.8□□□□□ -1.16
SHROOM1-206ENST00000495680 A6NHS1 94 aa7.8□□□□□ -1.16
SHROOM1-206ENST00000495680 FAM74A7A6NL05 159 aa7.8□□□□□ -1.16
SHROOM1-206ENST00000495680 SERTAD4-AS1Q5TG53 156 aa7.8□□□□□ -1.16
SHROOM1-206ENST00000495680 PHLDA3Q9Y5J5 127 aa7.8□□□□□ -1.16
SHROOM1-206ENST00000495680 CTXND1A0A1B0GTU2 59 aa7.79□□□□□ -1.16
SHROOM1-206ENST00000495680 OXTP01178 125 aa7.79□□□□□ -1.16
SHROOM1-206ENST00000495680 MPV17L2Q567V2 206 aa7.79□□□□□ -1.16
SHROOM1-206ENST00000495680 COX8CQ7Z4L0 72 aa7.79□□□□□ -1.16
SHROOM1-206ENST00000495680 C15orf54Q8N8G6 183 aa7.79□□□□□ -1.16
SHROOM1-206ENST00000495680 DAZAP1Q96EP5 407 aaKnown RBP7.79□□□□□ -1.16
SHROOM1-206ENST00000495680 TRBV7-3A0A075B6L6 115 aa7.78□□□□□ -1.16
SHROOM1-206ENST00000495680 SEC11BP0C7V7 166 aa7.78□□□□□ -1.16
SHROOM1-206ENST00000495680 TPT1P13693 172 aaKnown RBP7.78□□□□□ -1.16
SHROOM1-206ENST00000495680 ZNF674Q2M3X9 581 aa7.78□□□□□ -1.16
SHROOM1-206ENST00000495680 LINC01559Q495D7 138 aa7.78□□□□□ -1.16
SHROOM1-206ENST00000495680 FAM162BQ5T6X4 162 aa7.78□□□□□ -1.16
SHROOM1-206ENST00000495680 HIST1H2BAQ96A08 127 aa7.78□□□□□ -1.16
SHROOM1-206ENST00000495680 CHCHD7Q9BUK0 85 aa7.78□□□□□ -1.16
SHROOM1-206ENST00000495680 PLA2G2DQ9UNK4 145 aa7.78□□□□□ -1.16
SHROOM1-206ENST00000495680 TRBV6-8A0A0A6YYG3 113 aa7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 TRBV10-1A0A0K0K1A3 114 aa7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 USP17L23D6RBM5 183 aa7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 TMEM262E9PQX1 116 aa7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 PANO1I0J062 215 aa7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 RPL37AP61513 92 aaKnown RBP7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 RPL36AP83881 106 aaKnown RBP7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 RPL19P84098 196 aaKnown RBP7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 ELOBQ15370 118 aa7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 NEXN-AS1Q8NBZ9 246 aa7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 RPL36ALQ969Q0 106 aaKnown RBP7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 C1orf43Q9BWL3 253 aa7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 ZFP30Q9Y2G7 519 aa7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.77□□□□□ -1.17
SHROOM1-206ENST00000495680 HLA-DQA1P01909 254 aa7.76□□□□□ -1.17
SHROOM1-206ENST00000495680 PRSS1P07477 247 aa7.76□□□□□ -1.17
SHROOM1-206ENST00000495680 Q0VG73 95 aa7.76□□□□□ -1.17
SHROOM1-206ENST00000495680 KCNIP4Q6PIL6 250 aa7.76□□□□□ -1.17
SHROOM1-206ENST00000495680 ZFP82Q8N141 532 aa7.76□□□□□ -1.17
SHROOM1-206ENST00000495680 OR10G8Q8NGN5 311 aa7.76□□□□□ -1.17
SHROOM1-206ENST00000495680 OR10AG1Q8NH19 301 aa7.76□□□□□ -1.17
SHROOM1-206ENST00000495680 MED28Q9H204 178 aa7.76□□□□□ -1.17
SHROOM1-206ENST00000495680 FXYD6-FXYD2A0A087WZ82 144 aa7.75□□□□□ -1.17
SHROOM1-206ENST00000495680 MUC21A0A0G2JKD1 596 aa7.75□□□□□ -1.17
SHROOM1-206ENST00000495680 MUC21A0A140T8X8 626 aa7.75□□□□□ -1.17
SHROOM1-206ENST00000495680 PTTG1O95997 202 aa7.75□□□□□ -1.17
SHROOM1-206ENST00000495680 LTAP01374 205 aa7.75□□□□□ -1.17
SHROOM1-206ENST00000495680 CRPP02741 224 aa7.75□□□□□ -1.17
SHROOM1-206ENST00000495680 ANGP03950 147 aaKnown RBP7.75□□□□□ -1.17
SHROOM1-206ENST00000495680 PRR27Q6MZM9 219 aa7.75□□□□□ -1.17
SHROOM1-206ENST00000495680 KRTAP26-1Q6PEX3 210 aa7.75□□□□□ -1.17
SHROOM1-206ENST00000495680 CLPSL2Q6UWE3 100 aa7.75□□□□□ -1.17
SHROOM1-206ENST00000495680 NTM-AS1Q6ZSK4 140 aa7.75□□□□□ -1.17
SHROOM1-206ENST00000495680 FMC1Q96HJ9 113 aa7.75□□□□□ -1.17
SHROOM1-206ENST00000495680 BORCS7-ASMTA0A0B4J1R7 106 aa7.74□□□□□ -1.17
SHROOM1-206ENST00000495680 TRBV6-1A0A0K0K1D8 114 aa7.74□□□□□ -1.17
SHROOM1-206ENST00000495680 MAP1LC3B2A6NCE7 125 aa7.74□□□□□ -1.17
SHROOM1-206ENST00000495680 G3V3Q6 166 aa7.74□□□□□ -1.17
SHROOM1-206ENST00000495680 RAB4BP61018 213 aa7.74□□□□□ -1.17
SHROOM1-206ENST00000495680 UBE2G1P62253 170 aa7.74□□□□□ -1.17
SHROOM1-206ENST00000495680 ZNF56Q15929 161 aa7.74□□□□□ -1.17
SHROOM1-206ENST00000495680 C14orf177Q52M58 125 aa7.74□□□□□ -1.17
SHROOM1-206ENST00000495680 INO80EQ8NBZ0 244 aaPredicted RBP7.74□□□□□ -1.17
SHROOM1-206ENST00000495680 NKX6-2Q9C056 277 aaPredicted RBP7.74□□□□□ -1.17
SHROOM1-206ENST00000495680 MAP1LC3BQ9GZQ8 125 aa7.74□□□□□ -1.17
SHROOM1-206ENST00000495680 GIPP09681 153 aaPredicted RBP7.73□□□□□ -1.17
SHROOM1-206ENST00000495680 MT1HL1P0DM35 61 aa7.73□□□□□ -1.17
SHROOM1-206ENST00000495680 FHITP49789 147 aa7.73□□□□□ -1.17
SHROOM1-206ENST00000495680 AKR1C8PQ5T2L2 129 aa7.73□□□□□ -1.17
SHROOM1-206ENST00000495680 CST9LP1Q5W188 147 aa7.73□□□□□ -1.17
SHROOM1-206ENST00000495680 CHCHD5Q9BSY4 110 aa7.73□□□□□ -1.17
SHROOM1-206ENST00000495680 CYTL1Q9NRR1 136 aa7.73□□□□□ -1.17
SHROOM1-206ENST00000495680 AKR1C3P42330 323 aa7.72□□□□□ -1.17
SHROOM1-206ENST00000495680 SSTP61278 116 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms