RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 FAM74A7A6NL05 159 aa14.53□□□□□ -0.08
HDDC3-203ENST00000494993 M0R036 132 aa14.53□□□□□ -0.08
HDDC3-203ENST00000494993 FAM74A4Q5TZK3 123 aa14.53□□□□□ -0.08
HDDC3-203ENST00000494993 NKX6-2Q9C056 277 aaPredicted RBP14.53□□□□□ -0.08
HDDC3-203ENST00000494993 GRIFINA4D1Z8 144 aa14.52□□□□□ -0.09
HDDC3-203ENST00000494993 SH2D1AO60880 128 aa14.52□□□□□ -0.09
HDDC3-203ENST00000494993 GIPP09681 153 aaPredicted RBP14.52□□□□□ -0.09
HDDC3-203ENST00000494993 SEC11BP0C7V7 166 aa14.52□□□□□ -0.09
HDDC3-203ENST00000494993 COX8CQ7Z4L0 72 aa14.52□□□□□ -0.09
HDDC3-203ENST00000494993 PTTG1O95997 202 aa14.51□□□□□ -0.09
HDDC3-203ENST00000494993 LINC01620Q4KN68 170 aa14.51□□□□□ -0.09
HDDC3-203ENST00000494993 SFRP2Q96HF1 295 aa14.51□□□□□ -0.09
HDDC3-203ENST00000494993 DNAJC30Q96LL9 226 aa14.51□□□□□ -0.09
HDDC3-203ENST00000494993 KLK12Q9UKR0 248 aa14.51□□□□□ -0.09
HDDC3-203ENST00000494993 ZFP30Q9Y2G7 519 aa14.51□□□□□ -0.09
HDDC3-203ENST00000494993 IGKV2D-24A0A075B6R9 120 aa14.5□□□□□ -0.09
HDDC3-203ENST00000494993 A0A087WWL8 130 aa14.5□□□□□ -0.09
HDDC3-203ENST00000494993 FAM162BQ5T6X4 162 aa14.5□□□□□ -0.09
HDDC3-203ENST00000494993 Q8N976 141 aa14.5□□□□□ -0.09
HDDC3-203ENST00000494993 PHLDA3Q9Y5J5 127 aa14.5□□□□□ -0.09
HDDC3-203ENST00000494993 FXYD6-FXYD2A0A087WZ82 144 aa14.49□□□□□ -0.09
HDDC3-203ENST00000494993 RBFOX3A6NFN3 312 aa14.49□□□□□ -0.09
HDDC3-203ENST00000494993 TPT1P13693 172 aaKnown RBP14.49□□□□□ -0.09
HDDC3-203ENST00000494993 AKR1C8PQ5T2L2 129 aa14.49□□□□□ -0.09
HDDC3-203ENST00000494993 SCXQ7RTU7 201 aa14.49□□□□□ -0.09
HDDC3-203ENST00000494993 FMC1Q96HJ9 113 aa14.49□□□□□ -0.09
HDDC3-203ENST00000494993 CHCHD7Q9BUK0 85 aa14.49□□□□□ -0.09
HDDC3-203ENST00000494993 KRTAP29-1A8MX34 341 aaPredicted RBP14.48□□□□□ -0.09
HDDC3-203ENST00000494993 M0R381 172 aa14.48□□□□□ -0.09
HDDC3-203ENST00000494993 UBE2G1P62253 170 aa14.48□□□□□ -0.09
HDDC3-203ENST00000494993 LINC01559Q495D7 138 aa14.48□□□□□ -0.09
HDDC3-203ENST00000494993 DEFB104AQ8WTQ1 72 aa14.48□□□□□ -0.09
HDDC3-203ENST00000494993 A0A087WX48 190 aa14.47□□□□□ -0.09
HDDC3-203ENST00000494993 TRBV10-1A0A0K0K1A3 114 aa14.47□□□□□ -0.09
HDDC3-203ENST00000494993 ZNF674Q2M3X9 581 aa14.47□□□□□ -0.09
HDDC3-203ENST00000494993 UBE2WQ96B02 151 aa14.47□□□□□ -0.09
HDDC3-203ENST00000494993 TMSB15BA0A087X1C1 80 aa14.46□□□□□ -0.09
HDDC3-203ENST00000494993 RPL36AP83881 106 aaKnown RBP14.46□□□□□ -0.09
HDDC3-203ENST00000494993 ELOBQ15370 118 aa14.46□□□□□ -0.09
HDDC3-203ENST00000494993 ZFP82Q8N141 532 aa14.46□□□□□ -0.09
HDDC3-203ENST00000494993 RPL36ALQ969Q0 106 aaKnown RBP14.46□□□□□ -0.09
HDDC3-203ENST00000494993 TRBV6-1A0A0K0K1D8 114 aa14.45□□□□□ -0.1
HDDC3-203ENST00000494993 MAP1LC3B2A6NCE7 125 aa14.45□□□□□ -0.1
HDDC3-203ENST00000494993 UBE2D3P61077 147 aa14.45□□□□□ -0.1
HDDC3-203ENST00000494993 UBE2D2P62837 147 aa14.45□□□□□ -0.1
HDDC3-203ENST00000494993 ATRAIDQ6UW56 229 aa14.45□□□□□ -0.1
HDDC3-203ENST00000494993 MAP1LC3BQ9GZQ8 125 aa14.45□□□□□ -0.1
HDDC3-203ENST00000494993 LTAP01374 205 aa14.44□□□□□ -0.1
HDDC3-203ENST00000494993 KCNIP4Q6PIL6 250 aa14.44□□□□□ -0.1
HDDC3-203ENST00000494993 TCEAL7Q9BRU2 100 aa14.44□□□□□ -0.1
HDDC3-203ENST00000494993 CHAC1Q9BUX1 264 aa14.44□□□□□ -0.1
HDDC3-203ENST00000494993 TRBV7-3A0A075B6L6 115 aa14.43□□□□□ -0.1
HDDC3-203ENST00000494993 FHITP49789 147 aa14.43□□□□□ -0.1
HDDC3-203ENST00000494993 Q0VG73 95 aa14.42□□□□□ -0.1
HDDC3-203ENST00000494993 LRP1Q07954 4544 aaKnown RBP14.42□□□□□ -0.1
HDDC3-203ENST00000494993 AKR1C3P42330 323 aa14.41□□□□□ -0.1
HDDC3-203ENST00000494993 CST9LP1Q5W188 147 aa14.41□□□□□ -0.1
HDDC3-203ENST00000494993 OR10G8Q8NGN5 311 aa14.41□□□□□ -0.1
HDDC3-203ENST00000494993 G3V3Q6 166 aa14.4□□□□□ -0.1
HDDC3-203ENST00000494993 KRTAP10-4P60372 401 aaPredicted RBP14.4□□□□□ -0.1
HDDC3-203ENST00000494993 STOML3Q8TAV4 291 aa14.4□□□□□ -0.1
HDDC3-203ENST00000494993 CIRBP-AS1Q8TBR5 109 aa14.4□□□□□ -0.1
HDDC3-203ENST00000494993 CYTL1Q9NRR1 136 aa14.4□□□□□ -0.1
HDDC3-203ENST00000494993 TRBV6-8A0A0A6YYG3 113 aa14.39□□□□□ -0.11
HDDC3-203ENST00000494993 RAB4BP61018 213 aa14.39□□□□□ -0.11
HDDC3-203ENST00000494993 C1orf43Q9BWL3 253 aa14.39□□□□□ -0.11
HDDC3-203ENST00000494993 BATF3Q9NR55 127 aa14.39□□□□□ -0.11
HDDC3-203ENST00000494993 TMEM262E9PQX1 116 aa14.38□□□□□ -0.11
HDDC3-203ENST00000494993 ZNF56Q15929 161 aa14.38□□□□□ -0.11
HDDC3-203ENST00000494993 C14orf177Q52M58 125 aa14.38□□□□□ -0.11
HDDC3-203ENST00000494993 ENHOQ6UWT2 76 aa14.38□□□□□ -0.11
HDDC3-203ENST00000494993 FAT3Q8TDW7 4589 aa14.38□□□□□ -0.11
HDDC3-203ENST00000494993 NEXN-AS1Q8NBZ9 246 aa14.37□□□□□ -0.11
HDDC3-203ENST00000494993 OR10AG1Q8NH19 301 aa14.37□□□□□ -0.11
HDDC3-203ENST00000494993 ARPC5O15511 151 aa14.36□□□□□ -0.11
HDDC3-203ENST00000494993 PAGE4O60829 102 aa14.36□□□□□ -0.11
HDDC3-203ENST00000494993 CRPP02741 224 aa14.36□□□□□ -0.11
HDDC3-203ENST00000494993 CXCL1P09341 107 aa14.36□□□□□ -0.11
HDDC3-203ENST00000494993 RPL19P84098 196 aaKnown RBP14.36□□□□□ -0.11
HDDC3-203ENST00000494993 MPV17L2Q567V2 206 aa14.36□□□□□ -0.11
HDDC3-203ENST00000494993 PRR27Q6MZM9 219 aa14.36□□□□□ -0.11
HDDC3-203ENST00000494993 C15orf54Q8N8G6 183 aa14.36□□□□□ -0.11
HDDC3-203ENST00000494993 IGLV2-8P01709 118 aa14.35□□□□□ -0.11
HDDC3-203ENST00000494993 PKHD1L1Q86WI1 4243 aa14.35□□□□□ -0.11
HDDC3-203ENST00000494993 ANGP03950 147 aaKnown RBP14.34□□□□□ -0.11
HDDC3-203ENST00000494993 S100A9P06702 114 aaKnown RBP14.34□□□□□ -0.11
HDDC3-203ENST00000494993 ZNF471Q9BX82 626 aaPredicted RBP14.34□□□□□ -0.11
HDDC3-203ENST00000494993 SNAI2O43623 268 aa14.33□□□□□ -0.12
HDDC3-203ENST00000494993 SREK1IP1Q8N9Q2 155 aaPredicted RBP14.33□□□□□ -0.12
HDDC3-203ENST00000494993 SCO2A0A1W2PP80 73 aa14.32□□□□□ -0.12
HDDC3-203ENST00000494993 PKIAP61925 76 aa14.32□□□□□ -0.12
HDDC3-203ENST00000494993 CHCHD5Q9BSY4 110 aa14.32□□□□□ -0.12
HDDC3-203ENST00000494993 MLST8Q9BVC4 326 aa14.32□□□□□ -0.12
HDDC3-203ENST00000494993 SSBP4Q9BWG4 385 aaPredicted RBP14.32□□□□□ -0.12
HDDC3-203ENST00000494993 USP17L23D6RBM5 183 aa14.31□□□□□ -0.12
HDDC3-203ENST00000494993 SPANXN1Q5VSR9 72 aa14.31□□□□□ -0.12
HDDC3-203ENST00000494993 MUC21A0A0G2JKD1 596 aa14.3□□□□□ -0.12
HDDC3-203ENST00000494993 MUC21A0A140T8X8 626 aa14.3□□□□□ -0.12
HDDC3-203ENST00000494993 OXTP01178 125 aa14.3□□□□□ -0.12
HDDC3-203ENST00000494993 HLA-DQA1P01909 254 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms