RNA–Protein interactions for RNA: ENST00000494780.1

COL27A1-208, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 4

Gene COL27A1, Length 514 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-208ENST00000494780 BAALCQ8WXS3 180 aa15.32■□□□□ 0.04
COL27A1-208ENST00000494780 ZC2HC1AQ96GY0 325 aa15.32■□□□□ 0.04
COL27A1-208ENST00000494780 ZFP30Q9Y2G7 519 aa15.32■□□□□ 0.04
COL27A1-208ENST00000494780 RNF222A6NCQ9 220 aa15.31■□□□□ 0.04
COL27A1-208ENST00000494780 FAM74A7A6NL05 159 aa15.31■□□□□ 0.04
COL27A1-208ENST00000494780 J3QL48 77 aa15.31■□□□□ 0.04
COL27A1-208ENST00000494780 M0R036 132 aa15.3■□□□□ 0.04
COL27A1-208ENST00000494780 FAM74A4Q5TZK3 123 aa15.3■□□□□ 0.04
COL27A1-208ENST00000494780 LINC00528Q8N1L1 170 aa15.3■□□□□ 0.04
COL27A1-208ENST00000494780 GRIFINA4D1Z8 144 aa15.29■□□□□ 0.04
COL27A1-208ENST00000494780 SH2D1AO60880 128 aa15.29■□□□□ 0.04
COL27A1-208ENST00000494780 FAM162BQ5T6X4 162 aa15.29■□□□□ 0.04
COL27A1-208ENST00000494780 Q8N976 141 aa15.29■□□□□ 0.04
COL27A1-208ENST00000494780 SFRP2Q96HF1 295 aa15.29■□□□□ 0.04
COL27A1-208ENST00000494780 PHLDA3Q9Y5J5 127 aa15.29■□□□□ 0.04
COL27A1-208ENST00000494780 TPT1P13693 172 aaKnown RBP15.28■□□□□ 0.04
COL27A1-208ENST00000494780 AKR1C8PQ5T2L2 129 aa15.28■□□□□ 0.04
COL27A1-208ENST00000494780 FMC1Q96HJ9 113 aa15.28■□□□□ 0.04
COL27A1-208ENST00000494780 CHCHD7Q9BUK0 85 aa15.28■□□□□ 0.04
COL27A1-208ENST00000494780 IGKV2D-24A0A075B6R9 120 aa15.27■□□□□ 0.04
COL27A1-208ENST00000494780 A0A087WWL8 130 aa15.27■□□□□ 0.04
COL27A1-208ENST00000494780 FXYD6-FXYD2A0A087WZ82 144 aa15.27■□□□□ 0.04
COL27A1-208ENST00000494780 KLK12Q9UKR0 248 aa15.27■□□□□ 0.04
COL27A1-208ENST00000494780 TRBV10-1A0A0K0K1A3 114 aa15.26■□□□□ 0.03
COL27A1-208ENST00000494780 RBFOX3A6NFN3 312 aa15.26■□□□□ 0.03
COL27A1-208ENST00000494780 UBE2G1P62253 170 aa15.26■□□□□ 0.03
COL27A1-208ENST00000494780 ELOBQ15370 118 aa15.26■□□□□ 0.03
COL27A1-208ENST00000494780 ZNF674Q2M3X9 581 aa15.26■□□□□ 0.03
COL27A1-208ENST00000494780 TRBV6-1A0A0K0K1D8 114 aa15.25■□□□□ 0.03
COL27A1-208ENST00000494780 LINC01559Q495D7 138 aa15.25■□□□□ 0.03
COL27A1-208ENST00000494780 ZFP82Q8N141 532 aa15.25■□□□□ 0.03
COL27A1-208ENST00000494780 DEFB104AQ8WTQ1 72 aa15.25■□□□□ 0.03
COL27A1-208ENST00000494780 TCEAL7Q9BRU2 100 aa15.25■□□□□ 0.03
COL27A1-208ENST00000494780 A0A087WX48 190 aa15.24■□□□□ 0.03
COL27A1-208ENST00000494780 KRTAP29-1A8MX34 341 aaPredicted RBP15.24■□□□□ 0.03
COL27A1-208ENST00000494780 M0R381 172 aa15.24■□□□□ 0.03
COL27A1-208ENST00000494780 RPL36AP83881 106 aaKnown RBP15.24■□□□□ 0.03
COL27A1-208ENST00000494780 LINC01620Q4KN68 170 aa15.24■□□□□ 0.03
COL27A1-208ENST00000494780 KCNIP4Q6PIL6 250 aa15.24■□□□□ 0.03
COL27A1-208ENST00000494780 SCXQ7RTU7 201 aa15.24■□□□□ 0.03
COL27A1-208ENST00000494780 RPL36ALQ969Q0 106 aaKnown RBP15.24■□□□□ 0.03
COL27A1-208ENST00000494780 UBE2WQ96B02 151 aa15.24■□□□□ 0.03
COL27A1-208ENST00000494780 DNAJC30Q96LL9 226 aa15.24■□□□□ 0.03
COL27A1-208ENST00000494780 TMSB15BA0A087X1C1 80 aa15.23■□□□□ 0.03
COL27A1-208ENST00000494780 MAP1LC3B2A6NCE7 125 aa15.23■□□□□ 0.03
COL27A1-208ENST00000494780 FHITP49789 147 aa15.23■□□□□ 0.03
COL27A1-208ENST00000494780 MAP1LC3BQ9GZQ8 125 aa15.23■□□□□ 0.03
COL27A1-208ENST00000494780 TRBV7-3A0A075B6L6 115 aa15.22■□□□□ 0.03
COL27A1-208ENST00000494780 LTAP01374 205 aa15.22■□□□□ 0.03
COL27A1-208ENST00000494780 UBE2D3P61077 147 aa15.22■□□□□ 0.03
COL27A1-208ENST00000494780 UBE2D2P62837 147 aa15.22■□□□□ 0.03
COL27A1-208ENST00000494780 ATRAIDQ6UW56 229 aa15.22■□□□□ 0.03
COL27A1-208ENST00000494780 BATF3Q9NR55 127 aa15.22■□□□□ 0.03
COL27A1-208ENST00000494780 Q0VG73 95 aa15.21■□□□□ 0.03
COL27A1-208ENST00000494780 CHAC1Q9BUX1 264 aa15.21■□□□□ 0.03
COL27A1-208ENST00000494780 CST9LP1Q5W188 147 aa15.2■□□□□ 0.02
COL27A1-208ENST00000494780 OR10G8Q8NGN5 311 aa15.2■□□□□ 0.02
COL27A1-208ENST00000494780 STOML3Q8TAV4 291 aa15.2■□□□□ 0.02
COL27A1-208ENST00000494780 AKR1C3P42330 323 aa15.19■□□□□ 0.02
COL27A1-208ENST00000494780 CYTL1Q9NRR1 136 aa15.18■□□□□ 0.02
COL27A1-208ENST00000494780 RAB4BP61018 213 aa15.17■□□□□ 0.02
COL27A1-208ENST00000494780 C14orf177Q52M58 125 aa15.17■□□□□ 0.02
COL27A1-208ENST00000494780 TRBV6-8A0A0A6YYG3 113 aa15.16■□□□□ 0.02
COL27A1-208ENST00000494780 TMEM262E9PQX1 116 aa15.16■□□□□ 0.02
COL27A1-208ENST00000494780 G3V3Q6 166 aa15.16■□□□□ 0.02
COL27A1-208ENST00000494780 C1orf43Q9BWL3 253 aa15.16■□□□□ 0.02
COL27A1-208ENST00000494780 ARPC5O15511 151 aa15.15■□□□□ 0.02
COL27A1-208ENST00000494780 CIRBP-AS1Q8TBR5 109 aa15.15■□□□□ 0.02
COL27A1-208ENST00000494780 S100A9P06702 114 aaKnown RBP15.14■□□□□ 0.01
COL27A1-208ENST00000494780 CXCL1P09341 107 aa15.14■□□□□ 0.01
COL27A1-208ENST00000494780 PRR27Q6MZM9 219 aa15.14■□□□□ 0.01
COL27A1-208ENST00000494780 ENHOQ6UWT2 76 aa15.14■□□□□ 0.01
COL27A1-208ENST00000494780 NEXN-AS1Q8NBZ9 246 aa15.14■□□□□ 0.01
COL27A1-208ENST00000494780 PAGE4O60829 102 aa15.13■□□□□ 0.01
COL27A1-208ENST00000494780 CRPP02741 224 aa15.13■□□□□ 0.01
COL27A1-208ENST00000494780 KRTAP10-4P60372 401 aaPredicted RBP15.13■□□□□ 0.01
COL27A1-208ENST00000494780 ZNF56Q15929 161 aa15.13■□□□□ 0.01
COL27A1-208ENST00000494780 SREK1IP1Q8N9Q2 155 aaPredicted RBP15.13■□□□□ 0.01
COL27A1-208ENST00000494780 OR10AG1Q8NH19 301 aa15.13■□□□□ 0.01
COL27A1-208ENST00000494780 ZNF471Q9BX82 626 aaPredicted RBP15.13■□□□□ 0.01
COL27A1-208ENST00000494780 PKIAP61925 76 aa15.12■□□□□ 0.01
COL27A1-208ENST00000494780 C15orf54Q8N8G6 183 aa15.12■□□□□ 0.01
COL27A1-208ENST00000494780 IGLV2-8P01709 118 aa15.11■□□□□ 0.01
COL27A1-208ENST00000494780 RPL19P84098 196 aaKnown RBP15.11■□□□□ 0.01
COL27A1-208ENST00000494780 MPV17L2Q567V2 206 aa15.11■□□□□ 0.01
COL27A1-208ENST00000494780 SSBP4Q9BWG4 385 aaPredicted RBP15.11■□□□□ 0.01
COL27A1-208ENST00000494780 SNAI2O43623 268 aa15.1■□□□□ 0.01
COL27A1-208ENST00000494780 MBD3L1Q8WWY6 194 aa15.1■□□□□ 0.01
COL27A1-208ENST00000494780 MLST8Q9BVC4 326 aa15.1■□□□□ 0.01
COL27A1-208ENST00000494780 ANGP03950 147 aaKnown RBP15.09■□□□□ 0.01
COL27A1-208ENST00000494780 TMEM97Q5BJF2 176 aa15.09■□□□□ 0.01
COL27A1-208ENST00000494780 SFT2D1Q8WV19 159 aa15.09■□□□□ 0.01
COL27A1-208ENST00000494780 CHCHD5Q9BSY4 110 aa15.09■□□□□ 0.01
COL27A1-208ENST00000494780 OR5AL1P0C617 328 aa15.08■□□□□ 0
COL27A1-208ENST00000494780 MIAQ16674 131 aa15.08■□□□□ 0
COL27A1-208ENST00000494780 SPANXN1Q5VSR9 72 aa15.08■□□□□ 0
COL27A1-208ENST00000494780 BAGE2Q86Y30 109 aa15.08■□□□□ 0
COL27A1-208ENST00000494780 SCO2A0A1W2PP80 73 aa15.07■□□□□ 0
COL27A1-208ENST00000494780 PFDN1O60925 122 aa15.07■□□□□ 0
COL27A1-208ENST00000494780 OXTP01178 125 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms