RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 KRTAP10-1P60331 282 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 UBE2G1P62253 170 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 Q86TA4 180 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 C10orf126Q8N4M7 172 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 C14orf178Q8N769 122 aaPredicted RBP6.45□□□□□ -1.38
MSH5-218ENST00000494646 GTSF1LQ9H1H1 148 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 PARLQ9H300 379 aa6.45□□□□□ -1.38
MSH5-218ENST00000494646 HERC1Q15751 4861 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 A4D1N5 150 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 A8MWV9 139 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 IBA57-AS1B1ANH7 110 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 PAGE4O60829 102 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 XGP55808 180 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 LINC01556Q5JQF7 62 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 LELP1Q5T871 98 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 Q8N3U1 123 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 KCNRGQ8N5I3 272 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 OR11H4Q8NGC9 324 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 STOML3Q8TAV4 291 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 IL36BQ9NZH7 164 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 ZFP30Q9Y2G7 519 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 MYCBP2O75592 4640 aa6.44□□□□□ -1.38
MSH5-218ENST00000494646 FAM74A4Q5TZK3 123 aa6.43□□□□□ -1.38
MSH5-218ENST00000494646 ZFP2Q6ZN57 461 aa6.43□□□□□ -1.38
MSH5-218ENST00000494646 FAM213BQ8TBF2 198 aa6.43□□□□□ -1.38
MSH5-218ENST00000494646 SFT2D1Q8WV19 159 aa6.43□□□□□ -1.38
MSH5-218ENST00000494646 FMC1Q96HJ9 113 aa6.43□□□□□ -1.38
MSH5-218ENST00000494646 ZNF471Q9BX82 626 aaPredicted RBP6.43□□□□□ -1.38
MSH5-218ENST00000494646 PHLDA3Q9Y5J5 127 aa6.43□□□□□ -1.38
MSH5-218ENST00000494646 LRCOL1A6NCL2 159 aa6.42□□□□□ -1.38
MSH5-218ENST00000494646 M0R381 172 aa6.42□□□□□ -1.38
MSH5-218ENST00000494646 GCSHP23434 173 aa6.42□□□□□ -1.38
MSH5-218ENST00000494646 AKR1C3P42330 323 aa6.42□□□□□ -1.38
MSH5-218ENST00000494646 DNLZQ5SXM8 178 aa6.42□□□□□ -1.38
MSH5-218ENST00000494646 FAM162BQ5T6X4 162 aa6.42□□□□□ -1.38
MSH5-218ENST00000494646 UFSP1Q6NVU6 142 aa6.42□□□□□ -1.38
MSH5-218ENST00000494646 SYT8Q8NBV8 401 aa6.42□□□□□ -1.38
MSH5-218ENST00000494646 MBD3L1Q8WWY6 194 aa6.42□□□□□ -1.38
MSH5-218ENST00000494646 TRBV6-1A0A0K0K1D8 114 aa6.41□□□□□ -1.38
MSH5-218ENST00000494646 KANTRA0A1W2PQU2 76 aa6.41□□□□□ -1.38
MSH5-218ENST00000494646 GAGE10A6NGK3 116 aa6.41□□□□□ -1.38
MSH5-218ENST00000494646 HMSDA8MTL9 139 aa6.41□□□□□ -1.38
MSH5-218ENST00000494646 LTAP01374 205 aa6.41□□□□□ -1.38
MSH5-218ENST00000494646 SMR3BP02814 79 aaPredicted RBP6.41□□□□□ -1.38
MSH5-218ENST00000494646 SEC11BP0C7V7 166 aa6.41□□□□□ -1.38
MSH5-218ENST00000494646 TPT1P13693 172 aaKnown RBP6.41□□□□□ -1.38
MSH5-218ENST00000494646 SSTP61278 116 aa6.41□□□□□ -1.38
MSH5-218ENST00000494646 HAMPP81172 84 aa6.41□□□□□ -1.38
MSH5-218ENST00000494646 RPL19P84098 196 aaKnown RBP6.41□□□□□ -1.38
MSH5-218ENST00000494646 COX8CQ7Z4L0 72 aa6.41□□□□□ -1.38
MSH5-218ENST00000494646 DAZ4Q86SG3 579 aaKnown RBP6.41□□□□□ -1.38
MSH5-218ENST00000494646 SFRP2Q96HF1 295 aa6.41□□□□□ -1.38
MSH5-218ENST00000494646 DAZ3Q9NR90 486 aaKnown RBP6.41□□□□□ -1.38
MSH5-218ENST00000494646 IGLV5-52A0A0A0MRZ9 124 aa6.4□□□□□ -1.38
MSH5-218ENST00000494646 A0A0D9SG52 128 aa6.4□□□□□ -1.38
MSH5-218ENST00000494646 SCO2A0A1W2PP80 73 aa6.4□□□□□ -1.38
MSH5-218ENST00000494646 EPM2AB3EWF7 344 aa6.4□□□□□ -1.38
MSH5-218ENST00000494646 H2AFB1P0C5Y9 115 aa6.4□□□□□ -1.38
MSH5-218ENST00000494646 ZNF345Q14585 488 aa6.4□□□□□ -1.38
MSH5-218ENST00000494646 PIK3CD-AS1Q5SR53 167 aa6.4□□□□□ -1.38
MSH5-218ENST00000494646 TMUB2Q71RG4 321 aa6.4□□□□□ -1.38
MSH5-218ENST00000494646 MUC21A0A0G2JKD1 596 aa6.39□□□□□ -1.39
MSH5-218ENST00000494646 MUC21A0A140T8X8 626 aa6.39□□□□□ -1.39
MSH5-218ENST00000494646 UMAD1C9J7I0 102 aa6.39□□□□□ -1.39
MSH5-218ENST00000494646 LECT2O14960 151 aa6.39□□□□□ -1.39
MSH5-218ENST00000494646 BCL2L11O43521 198 aa6.39□□□□□ -1.39
MSH5-218ENST00000494646 LINC00694P0DN24 101 aa6.39□□□□□ -1.39
MSH5-218ENST00000494646 CCL20P78556 96 aa6.39□□□□□ -1.39
MSH5-218ENST00000494646 PRR27Q6MZM9 219 aa6.39□□□□□ -1.39
MSH5-218ENST00000494646 BAGE2Q86Y30 109 aa6.39□□□□□ -1.39
MSH5-218ENST00000494646 ZFP82Q8N141 532 aa6.39□□□□□ -1.39
MSH5-218ENST00000494646 Q8N814 137 aa6.39□□□□□ -1.39
MSH5-218ENST00000494646 DNAJC30Q96LL9 226 aa6.39□□□□□ -1.39
MSH5-218ENST00000494646 SRRM2Q9UQ35 2752 aaKnown RBP6.39□□□□□ -1.39
MSH5-218ENST00000494646 RHODO00212 210 aa6.38□□□□□ -1.39
MSH5-218ENST00000494646 PFDN1O60925 122 aa6.38□□□□□ -1.39
MSH5-218ENST00000494646 S100A9P06702 114 aaKnown RBP6.38□□□□□ -1.39
MSH5-218ENST00000494646 WFDC2Q14508 124 aa6.38□□□□□ -1.39
MSH5-218ENST00000494646 TCEAL7Q9BRU2 100 aa6.38□□□□□ -1.39
MSH5-218ENST00000494646 TM2D2Q9BX73 214 aa6.38□□□□□ -1.39
MSH5-218ENST00000494646 A0A087WWC5 75 aa6.37□□□□□ -1.39
MSH5-218ENST00000494646 OR10AG1Q8NH19 301 aa6.37□□□□□ -1.39
MSH5-218ENST00000494646 BAALCQ8WXS3 180 aa6.37□□□□□ -1.39
MSH5-218ENST00000494646 MLST8Q9BVC4 326 aa6.37□□□□□ -1.39
MSH5-218ENST00000494646 GNG13Q9P2W3 67 aa6.37□□□□□ -1.39
MSH5-218ENST00000494646 KLK12Q9UKR0 248 aa6.37□□□□□ -1.39
MSH5-218ENST00000494646 URGCP-MRPS24S4R325 110 aa6.37□□□□□ -1.39
MSH5-218ENST00000494646 FAT3Q8TDW7 4589 aa6.37□□□□□ -1.39
MSH5-218ENST00000494646 TRAV8-3A0A0A6YYJ7 113 aa6.36□□□□□ -1.39
MSH5-218ENST00000494646 TMEM262E9PQX1 116 aa6.36□□□□□ -1.39
MSH5-218ENST00000494646 INAFM2P0DMQ5 153 aa6.36□□□□□ -1.39
MSH5-218ENST00000494646 RPL35P42766 123 aaKnown RBP6.36□□□□□ -1.39
MSH5-218ENST00000494646 EIF5AP63241 154 aaKnown RBP6.36□□□□□ -1.39
MSH5-218ENST00000494646 RPL36AP83881 106 aaKnown RBP6.36□□□□□ -1.39
MSH5-218ENST00000494646 LAGE3Q14657 143 aa6.36□□□□□ -1.39
MSH5-218ENST00000494646 ZNF56Q15929 161 aa6.36□□□□□ -1.39
MSH5-218ENST00000494646 MAJINQ3KP22 176 aa6.36□□□□□ -1.39
MSH5-218ENST00000494646 Q5VSD8 79 aa6.36□□□□□ -1.39
MSH5-218ENST00000494646 NIT1Q86X76 327 aa6.36□□□□□ -1.39
MSH5-218ENST00000494646 NTN5Q8WTR8 489 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 130.2 ms