RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 PEX7O00628 323 aa6.31□□□□□ -1.4
UBR4-216ENST00000494503 ARMS2P0C7Q2 107 aa6.31□□□□□ -1.4
UBR4-216ENST00000494503 LINC00694P0DN24 101 aa6.31□□□□□ -1.4
UBR4-216ENST00000494503 UBE2G1P62253 170 aa6.31□□□□□ -1.4
UBR4-216ENST00000494503 RPL36AP83881 106 aaKnown RBP6.31□□□□□ -1.4
UBR4-216ENST00000494503 IFITM3Q01628 133 aa6.31□□□□□ -1.4
UBR4-216ENST00000494503 C14orf177Q52M58 125 aa6.31□□□□□ -1.4
UBR4-216ENST00000494503 Q86TA4 180 aa6.31□□□□□ -1.4
UBR4-216ENST00000494503 C15orf54Q8N8G6 183 aa6.31□□□□□ -1.4
UBR4-216ENST00000494503 RPL36ALQ969Q0 106 aaKnown RBP6.31□□□□□ -1.4
UBR4-216ENST00000494503 PSMG3Q9BT73 122 aaPredicted RBP6.31□□□□□ -1.4
UBR4-216ENST00000494503 IL36BQ9NZH7 164 aa6.31□□□□□ -1.4
UBR4-216ENST00000494503 SH2D1AO60880 128 aa6.3□□□□□ -1.4
UBR4-216ENST00000494503 ANGP03950 147 aaKnown RBP6.3□□□□□ -1.4
UBR4-216ENST00000494503 RPL37AP61513 92 aaKnown RBP6.3□□□□□ -1.4
UBR4-216ENST00000494503 Q0VG73 95 aa6.3□□□□□ -1.4
UBR4-216ENST00000494503 ZNF56Q15929 161 aa6.3□□□□□ -1.4
UBR4-216ENST00000494503 LINC00299Q6ZSB3 139 aa6.3□□□□□ -1.4
UBR4-216ENST00000494503 SREK1IP1Q8N9Q2 155 aaPredicted RBP6.3□□□□□ -1.4
UBR4-216ENST00000494503 A0A1W2PRE2 83 aa6.29□□□□□ -1.4
UBR4-216ENST00000494503 RNF222A6NCQ9 220 aa6.29□□□□□ -1.4
UBR4-216ENST00000494503 SSTP61278 116 aa6.29□□□□□ -1.4
UBR4-216ENST00000494503 SERF2P84101 59 aa6.29□□□□□ -1.4
UBR4-216ENST00000494503 PIK3CD-AS1Q5SR53 167 aa6.29□□□□□ -1.4
UBR4-216ENST00000494503 FAM162BQ5T6X4 162 aa6.29□□□□□ -1.4
UBR4-216ENST00000494503 CLPSL2Q6UWE3 100 aa6.29□□□□□ -1.4
UBR4-216ENST00000494503 INO80EQ8NBZ0 244 aaPredicted RBP6.29□□□□□ -1.4
UBR4-216ENST00000494503 ZC2HC1AQ96GY0 325 aa6.29□□□□□ -1.4
UBR4-216ENST00000494503 CHCHD5Q9BSY4 110 aa6.29□□□□□ -1.4
UBR4-216ENST00000494503 TRBV7-3A0A075B6L6 115 aa6.28□□□□□ -1.4
UBR4-216ENST00000494503 BORCS7-ASMTA0A0B4J1R7 106 aa6.28□□□□□ -1.4
UBR4-216ENST00000494503 KRBOX1C9JBD0 128 aa6.28□□□□□ -1.4
UBR4-216ENST00000494503 OXTP01178 125 aa6.28□□□□□ -1.4
UBR4-216ENST00000494503 UFSP1Q6NVU6 142 aa6.28□□□□□ -1.4
UBR4-216ENST00000494503 ZFP82Q8N141 532 aa6.28□□□□□ -1.4
UBR4-216ENST00000494503 SUN5Q8TC36 379 aa6.28□□□□□ -1.4
UBR4-216ENST00000494503 SFRP2Q96HF1 295 aa6.28□□□□□ -1.4
UBR4-216ENST00000494503 CHCHD7Q9BUK0 85 aa6.28□□□□□ -1.4
UBR4-216ENST00000494503 TNFSF18Q9UNG2 199 aa6.28□□□□□ -1.4
UBR4-216ENST00000494503 ALG5Q9Y673 324 aa6.28□□□□□ -1.4
UBR4-216ENST00000494503 FXYD6-FXYD2A0A087WZ82 144 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 CTXND1A0A1B0GTU2 59 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 A6NHS1 94 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 USP17L23D6RBM5 183 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 F5H697 171 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 PTTG1O95997 202 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 MPV17L2Q567V2 206 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 AKR1C8PQ5T2L2 129 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 CST9LP1Q5W188 147 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 RPL7L1Q6DKI1 246 aaKnown RBP6.27□□□□□ -1.41
UBR4-216ENST00000494503 STOML3Q8TAV4 291 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 HIST1H2BAQ96A08 127 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 DPH3Q96FX2 82 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 AQP10Q96PS8 301 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 MED28Q9H204 178 aa6.27□□□□□ -1.41
UBR4-216ENST00000494503 DNAH8Q96JB1 4490 aa6.26□□□□□ -1.41
UBR4-216ENST00000494503 TRBV6-8A0A0A6YYG3 113 aa6.26□□□□□ -1.41
UBR4-216ENST00000494503 MUC21A0A0G2JKD1 596 aa6.26□□□□□ -1.41
UBR4-216ENST00000494503 TRBV10-1A0A0K0K1A3 114 aa6.26□□□□□ -1.41
UBR4-216ENST00000494503 MUC21A0A140T8X8 626 aa6.26□□□□□ -1.41
UBR4-216ENST00000494503 FAM74A7A6NL05 159 aa6.26□□□□□ -1.41
UBR4-216ENST00000494503 AKR1C3P42330 323 aa6.26□□□□□ -1.41
UBR4-216ENST00000494503 CRIP1P50238 77 aa6.26□□□□□ -1.41
UBR4-216ENST00000494503 UBE2D3P61077 147 aa6.26□□□□□ -1.41
UBR4-216ENST00000494503 UBE2D2P62837 147 aa6.26□□□□□ -1.41
UBR4-216ENST00000494503 FMC1Q96HJ9 113 aa6.26□□□□□ -1.41
UBR4-216ENST00000494503 ZFP30Q9Y2G7 519 aa6.26□□□□□ -1.41
UBR4-216ENST00000494503 MAP1LC3B2A6NCE7 125 aa6.25□□□□□ -1.41
UBR4-216ENST00000494503 ZNF726P1Q15940 193 aa6.25□□□□□ -1.41
UBR4-216ENST00000494503 SPANXN1Q5VSR9 72 aa6.25□□□□□ -1.41
UBR4-216ENST00000494503 ENHOQ6UWT2 76 aa6.25□□□□□ -1.41
UBR4-216ENST00000494503 NKX6-2Q9C056 277 aaPredicted RBP6.25□□□□□ -1.41
UBR4-216ENST00000494503 MAP1LC3BQ9GZQ8 125 aa6.25□□□□□ -1.41
UBR4-216ENST00000494503 LRP1Q07954 4544 aaKnown RBP6.25□□□□□ -1.41
UBR4-216ENST00000494503 A0A1B0GV50 99 aa6.24□□□□□ -1.41
UBR4-216ENST00000494503 SMIM17P0DL12 118 aa6.24□□□□□ -1.41
UBR4-216ENST00000494503 KRTAP10-4P60372 401 aaPredicted RBP6.24□□□□□ -1.41
UBR4-216ENST00000494503 PKIAP61925 76 aa6.24□□□□□ -1.41
UBR4-216ENST00000494503 RPL19P84098 196 aaKnown RBP6.24□□□□□ -1.41
UBR4-216ENST00000494503 GAGE6Q13070 117 aa6.24□□□□□ -1.41
UBR4-216ENST00000494503 MIAQ16674 131 aa6.24□□□□□ -1.41
UBR4-216ENST00000494503 LINC01559Q495D7 138 aa6.24□□□□□ -1.41
UBR4-216ENST00000494503 PRR27Q6MZM9 219 aa6.24□□□□□ -1.41
UBR4-216ENST00000494503 ATRAIDQ6UW56 229 aa6.24□□□□□ -1.41
UBR4-216ENST00000494503 NEXN-AS1Q8NBZ9 246 aa6.24□□□□□ -1.41
UBR4-216ENST00000494503 ZNF471Q9BX82 626 aaPredicted RBP6.24□□□□□ -1.41
UBR4-216ENST00000494503 IGLV10-54A0A075B6I4 117 aa6.23□□□□□ -1.41
UBR4-216ENST00000494503 PRSS1P07477 247 aa6.23□□□□□ -1.41
UBR4-216ENST00000494503 MGPP08493 103 aa6.23□□□□□ -1.41
UBR4-216ENST00000494503 RAB4BP61018 213 aa6.23□□□□□ -1.41
UBR4-216ENST00000494503 ZNF674Q2M3X9 581 aa6.23□□□□□ -1.41
UBR4-216ENST00000494503 Q5BKY6 102 aa6.23□□□□□ -1.41
UBR4-216ENST00000494503 DNLZQ5SXM8 178 aa6.23□□□□□ -1.41
UBR4-216ENST00000494503 LINC00269Q8N2A0 174 aa6.23□□□□□ -1.41
UBR4-216ENST00000494503 OR10AG1Q8NH19 301 aa6.23□□□□□ -1.41
UBR4-216ENST00000494503 DERL1Q9BUN8 251 aa6.23□□□□□ -1.41
UBR4-216ENST00000494503 TPPP3Q9BW30 176 aa6.23□□□□□ -1.41
UBR4-216ENST00000494503 TRBV25-1A0A075B6N4 114 aa6.22□□□□□ -1.41
UBR4-216ENST00000494503 hDV102S1A0JD36 115 aa6.22□□□□□ -1.41
UBR4-216ENST00000494503 LTAP01374 205 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms