RNA–Protein interactions for RNA: ENST00000494327.1

HPS3-207, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 556 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-207ENST00000494327 UFSP1Q6NVU6 142 aa14.92□□□□□ -0.02
HPS3-207ENST00000494327 ATP6V0E2Q8NHE4 81 aa14.92□□□□□ -0.02
HPS3-207ENST00000494327 SFRP2Q96HF1 295 aa14.92□□□□□ -0.02
HPS3-207ENST00000494327 HECTD4Q9Y4D8 3996 aa14.92□□□□□ -0.02
HPS3-207ENST00000494327 RHODO00212 210 aa14.91□□□□□ -0.02
HPS3-207ENST00000494327 GNG4P50150 75 aa14.91□□□□□ -0.02
HPS3-207ENST00000494327 C14orf178Q8N769 122 aaPredicted RBP14.91□□□□□ -0.02
HPS3-207ENST00000494327 DAZAP1Q96EP5 407 aaKnown RBP14.91□□□□□ -0.02
HPS3-207ENST00000494327 TNFRSF18Q9Y5U5 241 aa14.91□□□□□ -0.02
HPS3-207ENST00000494327 MUC21A0A0G2JKD1 596 aa14.9□□□□□ -0.02
HPS3-207ENST00000494327 MUC21A0A140T8X8 626 aa14.9□□□□□ -0.02
HPS3-207ENST00000494327 MED14OSP0DP75 135 aa14.9□□□□□ -0.02
HPS3-207ENST00000494327 BTF3P20290 206 aaKnown RBP14.9□□□□□ -0.02
HPS3-207ENST00000494327 EVI2AP22794 236 aa14.9□□□□□ -0.02
HPS3-207ENST00000494327 TIRAPP58753 221 aa14.9□□□□□ -0.02
HPS3-207ENST00000494327 SSTP61278 116 aa14.9□□□□□ -0.02
HPS3-207ENST00000494327 OR10J3Q5JRS4 329 aa14.9□□□□□ -0.02
HPS3-207ENST00000494327 SMDT1Q9H4I9 107 aa14.9□□□□□ -0.02
HPS3-207ENST00000494327 IGLV2-8P01709 118 aa14.89□□□□□ -0.03
HPS3-207ENST00000494327 CXCL1P09341 107 aa14.89□□□□□ -0.03
HPS3-207ENST00000494327 OR10AG1Q8NH19 301 aa14.89□□□□□ -0.03
HPS3-207ENST00000494327 Q9UF83 564 aa14.89□□□□□ -0.03
HPS3-207ENST00000494327 TRAV8-6A0A0B4J262 113 aa14.88□□□□□ -0.03
HPS3-207ENST00000494327 NDUFS6O75380 124 aaKnown RBP14.88□□□□□ -0.03
HPS3-207ENST00000494327 CRYGDP07320 174 aa14.88□□□□□ -0.03
HPS3-207ENST00000494327 DNAH10OSP0CZ25 163 aa14.88□□□□□ -0.03
HPS3-207ENST00000494327 COMMD7Q86VX2 200 aa14.88□□□□□ -0.03
HPS3-207ENST00000494327 GTSF1LQ9H1H1 148 aa14.88□□□□□ -0.03
HPS3-207ENST00000494327 IGHV3-38A0A0C4DH36 116 aa14.87□□□□□ -0.03
HPS3-207ENST00000494327 SRSF3P84103 164 aaKnown RBP14.87□□□□□ -0.03
HPS3-207ENST00000494327 SPANXN1Q5VSR9 72 aa14.87□□□□□ -0.03
HPS3-207ENST00000494327 TMEM250H0YL14 139 aa14.86□□□□□ -0.03
HPS3-207ENST00000494327 SNAI2O43623 268 aa14.86□□□□□ -0.03
HPS3-207ENST00000494327 SRP19P09132 144 aaKnown RBP14.86□□□□□ -0.03
HPS3-207ENST00000494327 LELP1Q5T871 98 aa14.86□□□□□ -0.03
HPS3-207ENST00000494327 OR2D3Q8NGH3 330 aa14.86□□□□□ -0.03
HPS3-207ENST00000494327 SSBP4Q9BWG4 385 aaPredicted RBP14.86□□□□□ -0.03
HPS3-207ENST00000494327 TRBV20OR9-2A0A075B6H5 130 aa14.85□□□□□ -0.03
HPS3-207ENST00000494327 OR5AL1P0C617 328 aa14.85□□□□□ -0.03
HPS3-207ENST00000494327 GZMBP10144 247 aa14.85□□□□□ -0.03
HPS3-207ENST00000494327 UQCC3Q6UW78 93 aa14.85□□□□□ -0.03
HPS3-207ENST00000494327 SMIM12Q96EX1 92 aa14.85□□□□□ -0.03
HPS3-207ENST00000494327 TPPP3Q9BW30 176 aa14.85□□□□□ -0.03
HPS3-207ENST00000494327 Q6ZRN7 208 aaPredicted RBP14.84□□□□□ -0.03
HPS3-207ENST00000494327 MSRB1Q9NZV6 116 aa14.84□□□□□ -0.03
HPS3-207ENST00000494327 C19orf71A6NCJ1 209 aa14.83□□□□□ -0.04
HPS3-207ENST00000494327 K7EP13 123 aa14.83□□□□□ -0.04
HPS3-207ENST00000494327 P01737 135 aa14.83□□□□□ -0.04
HPS3-207ENST00000494327 IGHV3-30P01768 117 aa14.83□□□□□ -0.04
HPS3-207ENST00000494327 IGHV3-33P01772 117 aa14.83□□□□□ -0.04
HPS3-207ENST00000494327 IGHV3-30-3P0DP02 117 aa14.83□□□□□ -0.04
HPS3-207ENST00000494327 IGHV3-30-5P0DP03 117 aa14.83□□□□□ -0.04
HPS3-207ENST00000494327 CEBPGP53567 150 aa14.83□□□□□ -0.04
HPS3-207ENST00000494327 NDUFA5Q16718 116 aa14.83□□□□□ -0.04
HPS3-207ENST00000494327 NFE4Q86UQ8 179 aa14.83□□□□□ -0.04
HPS3-207ENST00000494327 PKD1P98161 4303 aa14.83□□□□□ -0.04
HPS3-207ENST00000494327 C9JQL5 133 aa14.82□□□□□ -0.04
HPS3-207ENST00000494327 LINC00694P0DN24 101 aa14.82□□□□□ -0.04
HPS3-207ENST00000494327 RPS20P60866 119 aaKnown RBP14.82□□□□□ -0.04
HPS3-207ENST00000494327 ZNF56Q15929 161 aa14.82□□□□□ -0.04
HPS3-207ENST00000494327 SPATA12Q7Z6I5 190 aa14.82□□□□□ -0.04
HPS3-207ENST00000494327 C10orf126Q8N4M7 172 aa14.82□□□□□ -0.04
HPS3-207ENST00000494327 BIN3Q9NQY0 253 aa14.82□□□□□ -0.04
HPS3-207ENST00000494327 C16orf90A8MZG2 172 aa14.81□□□□□ -0.04
HPS3-207ENST00000494327 LINC01556Q5JQF7 62 aa14.81□□□□□ -0.04
HPS3-207ENST00000494327 FER1L6-AS1Q8NA97 138 aa14.81□□□□□ -0.04
HPS3-207ENST00000494327 F5H697 171 aa14.8□□□□□ -0.04
HPS3-207ENST00000494327 XKRY2A2RUG3 117 aa14.79□□□□□ -0.04
HPS3-207ENST00000494327 RAB4BP61018 213 aa14.79□□□□□ -0.04
HPS3-207ENST00000494327 RPL36AP83881 106 aaKnown RBP14.79□□□□□ -0.04
HPS3-207ENST00000494327 RPL36ALQ969Q0 106 aaKnown RBP14.79□□□□□ -0.04
HPS3-207ENST00000494327 TRBV10-1A0A0K0K1A3 114 aa14.78□□□□□ -0.04
HPS3-207ENST00000494327 IGLC6P0CF74 106 aa14.78□□□□□ -0.04
HPS3-207ENST00000494327 SMIM17P0DL12 118 aa14.78□□□□□ -0.04
HPS3-207ENST00000494327 NUDT10Q8NFP7 164 aa14.78□□□□□ -0.04
HPS3-207ENST00000494327 OCC1Q8TAD7 63 aa14.78□□□□□ -0.04
HPS3-207ENST00000494327 NUDT11Q96G61 164 aa14.78□□□□□ -0.04
HPS3-207ENST00000494327 A0A087WWC5 75 aa14.77□□□□□ -0.05
HPS3-207ENST00000494327 FAM74A3Q4VXF1 159 aa14.77□□□□□ -0.05
HPS3-207ENST00000494327 SLC7A5P1Q8MH63 180 aa14.77□□□□□ -0.05
HPS3-207ENST00000494327 AP1S3Q96PC3 154 aa14.77□□□□□ -0.05
HPS3-207ENST00000494327 ZNF727A8MUV8 499 aa14.76□□□□□ -0.05
HPS3-207ENST00000494327 K7EN84 100 aa14.76□□□□□ -0.05
HPS3-207ENST00000494327 KRTAP10-2P60368 255 aa14.76□□□□□ -0.05
HPS3-207ENST00000494327 ERVFC1-1P60608 527 aa14.76□□□□□ -0.05
HPS3-207ENST00000494327 Q8N3U1 123 aa14.76□□□□□ -0.05
HPS3-207ENST00000494327 SMIM7Q9BQ49 75 aa14.76□□□□□ -0.05
HPS3-207ENST00000494327 RNASE7Q9H1E1 156 aaKnown RBP14.76□□□□□ -0.05
HPS3-207ENST00000494327 Q9HAA7 133 aa14.76□□□□□ -0.05
HPS3-207ENST00000494327 KIAA1109Q2LD37 5005 aa14.76□□□□□ -0.05
HPS3-207ENST00000494327 TRBV7-3A0A075B6L6 115 aa14.75□□□□□ -0.05
HPS3-207ENST00000494327 TMEM218A2RU14 115 aa14.75□□□□□ -0.05
HPS3-207ENST00000494327 IBA57-AS1B1ANH7 110 aa14.75□□□□□ -0.05
HPS3-207ENST00000494327 EREGO14944 169 aa14.75□□□□□ -0.05
HPS3-207ENST00000494327 CACNG7P62955 275 aa14.75□□□□□ -0.05
HPS3-207ENST00000494327 LYZL1Q6UWQ5 148 aa14.75□□□□□ -0.05
HPS3-207ENST00000494327 DYNC1H1Q14204 4646 aaKnown RBP14.74□□□□□ -0.05
HPS3-207ENST00000494327 UBE2D3P61077 147 aa14.74□□□□□ -0.05
HPS3-207ENST00000494327 UBE2D2P62837 147 aa14.74□□□□□ -0.05
HPS3-207ENST00000494327 NEXN-AS1Q8NBZ9 246 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms