RNA–Protein interactions for RNA: ENST00000494046.5

ABCA2-222, Transcript of ATP binding cassette subfamily A member 2, human

TSL 5

Gene ABCA2, Length 1,622 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCA2-222	ENST00000494046	FRAS1	Q86XX4	4008 aa		13.47	□□□□□ -0.25
ABCA2-222	ENST00000494046	LINC00587	B1AMM8	73 aa		13.47	□□□□□ -0.25
ABCA2-222	ENST00000494046	DMRTA1	Q5VZB9	504 aa		13.47	□□□□□ -0.25
ABCA2-222	ENST00000494046	RNASEK	Q6P5S7	137 aa	Known RBP	13.47	□□□□□ -0.25
ABCA2-222	ENST00000494046	NIT1	Q86X76	327 aa		13.47	□□□□□ -0.25
ABCA2-222	ENST00000494046	ZNF575	Q86XF7	245 aa		13.47	□□□□□ -0.25
ABCA2-222	ENST00000494046	TRAV10	A0A0B4J240	114 aa		13.46	□□□□□ -0.25
ABCA2-222	ENST00000494046	TSTD3	H0UI37	97 aa		13.46	□□□□□ -0.25
ABCA2-222	ENST00000494046	ZNF705D	P0CH99	300 aa	Predicted RBP	13.46	□□□□□ -0.25
ABCA2-222	ENST00000494046	ZNF705B	P0CI00	300 aa	Predicted RBP	13.46	□□□□□ -0.25
ABCA2-222	ENST00000494046	CHCHD1	Q96BP2	118 aa	Known RBP	13.46	□□□□□ -0.26
ABCA2-222	ENST00000494046	CLUHP3	Q96NS8	147 aa		13.46	□□□□□ -0.26
ABCA2-222	ENST00000494046	DNAH10	Q8IVF4	4471 aa		13.46	□□□□□ -0.26
ABCA2-222	ENST00000494046	NTF3	P20783	257 aa		13.45	□□□□□ -0.26
ABCA2-222	ENST00000494046	FAM104B	Q5XKR9	115 aa		13.45	□□□□□ -0.26
ABCA2-222	ENST00000494046	FAM19A2	Q8N3H0	131 aa		13.45	□□□□□ -0.26
ABCA2-222	ENST00000494046	OR8A1	Q8NGG7	326 aa		13.45	□□□□□ -0.26
ABCA2-222	ENST00000494046	URB1-AS1	Q96HZ7	61 aa		13.45	□□□□□ -0.26
ABCA2-222	ENST00000494046	CNFN	Q9BYD5	112 aa		13.45	□□□□□ -0.26
ABCA2-222	ENST00000494046	IGKV3D-20	A0A0C4DH25	116 aa		13.44	□□□□□ -0.26
ABCA2-222	ENST00000494046	TCTA	P57738	103 aa		13.44	□□□□□ -0.26
ABCA2-222	ENST00000494046	TWIST1	Q15672	202 aa		13.44	□□□□□ -0.26
ABCA2-222	ENST00000494046	C11orf21	Q9P2W6	132 aa		13.44	□□□□□ -0.26
ABCA2-222	ENST00000494046	IGHV4-4	A0A075B6R2	117 aa		13.43	□□□□□ -0.26
ABCA2-222	ENST00000494046	DEFB131B	A0A096LNP1	70 aa		13.43	□□□□□ -0.26
ABCA2-222	ENST00000494046	TRBV7-9	A0A0J9YWB2	115 aa		13.43	□□□□□ -0.26
ABCA2-222	ENST00000494046		M0R2Z0	102 aa		13.43	□□□□□ -0.26
ABCA2-222	ENST00000494046	KRTDAP	P60985	99 aa		13.43	□□□□□ -0.26
ABCA2-222	ENST00000494046	C1orf158	Q8N1D5	194 aa		13.43	□□□□□ -0.26
ABCA2-222	ENST00000494046	AMTN	Q6UX39	209 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	ZNF664	Q8N3J9	261 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	PRO1933	Q9H354	126 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	GOLT1B	Q9Y3E0	138 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	MUC21	A0A0G2JKD1	596 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	MUC21	A0A140T8X8	626 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	SMIM9	A6NGZ8	99 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	LINC00614	P0C842	121 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	SST	P61278	116 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	MUC21	Q5SSG8	566 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	ZFAND2A	Q8N6M9	145 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	FAM19A4	Q96LR4	140 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	TMEM191A	Q9H0A3	160 aa		13.42	□□□□□ -0.26
ABCA2-222	ENST00000494046	TRAV21	A0A0B4J279	112 aa		13.41	□□□□□ -0.26
ABCA2-222	ENST00000494046	SPART-AS1	P0CW21	52 aa		13.41	□□□□□ -0.26
ABCA2-222	ENST00000494046	RAB4A	P20338	218 aa		13.41	□□□□□ -0.26
ABCA2-222	ENST00000494046	SPINK13	Q1W4C9	94 aa		13.41	□□□□□ -0.26
ABCA2-222	ENST00000494046	PRR9	Q5T870	116 aa		13.41	□□□□□ -0.26
ABCA2-222	ENST00000494046	AMN1	Q8IY45	258 aa		13.41	□□□□□ -0.26
ABCA2-222	ENST00000494046		A8MTW9	85 aa		13.4	□□□□□ -0.26
ABCA2-222	ENST00000494046	C3orf79	P0CE67	100 aa		13.4	□□□□□ -0.26
ABCA2-222	ENST00000494046	TEX43	Q6ZNM6	134 aa		13.4	□□□□□ -0.26
ABCA2-222	ENST00000494046	PRM2	P04554	102 aa		13.39	□□□□□ -0.27
ABCA2-222	ENST00000494046	MRPL51	Q4U2R6	128 aa	Known RBP	13.39	□□□□□ -0.27
ABCA2-222	ENST00000494046	FAM222A	Q5U5X8	452 aa		13.39	□□□□□ -0.27
ABCA2-222	ENST00000494046	ORMDL3	Q8N138	153 aa		13.39	□□□□□ -0.27
ABCA2-222	ENST00000494046	PRELID3A	Q96N28	172 aa		13.39	□□□□□ -0.27
ABCA2-222	ENST00000494046	TMEM208	Q9BTX3	173 aa		13.39	□□□□□ -0.27
ABCA2-222	ENST00000494046		D6R8Y8	96 aa		13.39	□□□□□ -0.27
ABCA2-222	ENST00000494046	DUSP14	O95147	198 aa	Known RBP	13.39	□□□□□ -0.27
ABCA2-222	ENST00000494046		Q8N976	141 aa		13.39	□□□□□ -0.27
ABCA2-222	ENST00000494046	DKK2	Q9UBU2	259 aa		13.39	□□□□□ -0.27
ABCA2-222	ENST00000494046	SNAI2	O43623	268 aa		13.38	□□□□□ -0.27
ABCA2-222	ENST00000494046	OR5AL1	P0C617	328 aa		13.38	□□□□□ -0.27
ABCA2-222	ENST00000494046	DDT	P30046	118 aa		13.38	□□□□□ -0.27
ABCA2-222	ENST00000494046	RRN3P1	Q2M238	152 aa		13.38	□□□□□ -0.27
ABCA2-222	ENST00000494046	DNAH6	Q9C0G6	4158 aa		13.37	□□□□□ -0.27
ABCA2-222	ENST00000494046	TRAV12-2	A0A075B6T6	113 aa		13.37	□□□□□ -0.27
ABCA2-222	ENST00000494046	IGHV1-24	A0A0C4DH33	117 aa		13.37	□□□□□ -0.27
ABCA2-222	ENST00000494046		J3KRW8	73 aa		13.37	□□□□□ -0.27
ABCA2-222	ENST00000494046	CRX	O43186	299 aa	Predicted RBP	13.37	□□□□□ -0.27
ABCA2-222	ENST00000494046	CACNG7	P62955	275 aa		13.37	□□□□□ -0.27
ABCA2-222	ENST00000494046	MSRB1	Q9NZV6	116 aa		13.37	□□□□□ -0.27
ABCA2-222	ENST00000494046	CKS2	P33552	79 aa		13.36	□□□□□ -0.27
ABCA2-222	ENST00000494046		Q6ZQT7	251 aa		13.36	□□□□□ -0.27
ABCA2-222	ENST00000494046	FA2H	Q7L5A8	372 aa		13.36	□□□□□ -0.27
ABCA2-222	ENST00000494046	PRSS3P2	Q8NHM4	247 aa		13.36	□□□□□ -0.27
ABCA2-222	ENST00000494046	PPBP	P02775	128 aa		13.35	□□□□□ -0.27
ABCA2-222	ENST00000494046	HTN3	P15516	51 aa		13.35	□□□□□ -0.27
ABCA2-222	ENST00000494046	RNASE4	P34096	147 aa	Known RBP	13.35	□□□□□ -0.27
ABCA2-222	ENST00000494046	SMIM15	Q7Z3B0	74 aa		13.35	□□□□□ -0.27
ABCA2-222	ENST00000494046	RNF185	Q96GF1	192 aa		13.35	□□□□□ -0.27
ABCA2-222	ENST00000494046	NDUFAF3	Q9BU61	184 aa		13.35	□□□□□ -0.27
ABCA2-222	ENST00000494046	INS	P01308	110 aa		13.35	□□□□□ -0.27
ABCA2-222	ENST00000494046	BTF3	P20290	206 aa	Known RBP	13.35	□□□□□ -0.27
ABCA2-222	ENST00000494046	ODF3	Q96PU9	254 aa		13.35	□□□□□ -0.27
ABCA2-222	ENST00000494046	VAMP8	Q9BV40	100 aa		13.35	□□□□□ -0.27
ABCA2-222	ENST00000494046	AP5S1	Q9NUS5	200 aa		13.35	□□□□□ -0.27
ABCA2-222	ENST00000494046	LEPROTL1	O95214	131 aa		13.34	□□□□□ -0.27
ABCA2-222	ENST00000494046	PMCHL1	Q16048	86 aa		13.34	□□□□□ -0.27
ABCA2-222	ENST00000494046	OR10AG1	Q8NH19	301 aa		13.34	□□□□□ -0.27
ABCA2-222	ENST00000494046	KLLN	B2CW77	178 aa		13.33	□□□□□ -0.28
ABCA2-222	ENST00000494046	MED14OS	P0DP75	135 aa		13.33	□□□□□ -0.28
ABCA2-222	ENST00000494046	SPANXN1	Q5VSR9	72 aa		13.33	□□□□□ -0.28
ABCA2-222	ENST00000494046	LAMTOR2	Q9Y2Q5	125 aa		13.33	□□□□□ -0.28
ABCA2-222	ENST00000494046	TEX48	A0A1B0GUV7	120 aa		13.32	□□□□□ -0.28
ABCA2-222	ENST00000494046		H3BVH4	76 aa		13.32	□□□□□ -0.28
ABCA2-222	ENST00000494046	LEP	P41159	167 aa		13.32	□□□□□ -0.28
ABCA2-222	ENST00000494046	ASIP	P42127	132 aa		13.32	□□□□□ -0.28
ABCA2-222	ENST00000494046	ANXA2R	Q3ZCQ2	193 aa		13.32	□□□□□ -0.28
ABCA2-222	ENST00000494046	SMKR1	H3BMG3	65 aa		13.31	□□□□□ -0.28

Retrieved 100 of 20,778 RNA–protein pairs in 133.3 ms