RNA–Protein interactions for RNA: ENST00000493919.5

BRCA1-222, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 1,948 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-222ENST00000493919 C16orf92Q96LL3 132 aa8.9□□□□□ -0.99
BRCA1-222ENST00000493919 EPDR1Q9UM22 224 aa8.9□□□□□ -0.99
BRCA1-222ENST00000493919 COL6A5A8TX70 2615 aa8.89□□□□□ -0.99
BRCA1-222ENST00000493919 IGHG2P01859 326 aa8.89□□□□□ -0.99
BRCA1-222ENST00000493919 UBE2D3P61077 147 aa8.89□□□□□ -0.99
BRCA1-222ENST00000493919 NPC2P61916 151 aa8.89□□□□□ -0.99
BRCA1-222ENST00000493919 UBE2D2P62837 147 aa8.89□□□□□ -0.99
BRCA1-222ENST00000493919 URB1-AS1Q96HZ7 61 aa8.89□□□□□ -0.99
BRCA1-222ENST00000493919 DPH3P1Q9H4G8 78 aa8.89□□□□□ -0.99
BRCA1-222ENST00000493919 DNHD1Q96M86 4753 aa8.89□□□□□ -0.99
BRCA1-222ENST00000493919 hADV29S1A0JD25 119 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 RNASE1P07998 156 aaKnown RBP8.88□□□□□ -0.99
BRCA1-222ENST00000493919 LYZL2Q7Z4W2 148 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 ATP5L2Q7Z4Y8 100 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 PRR15Q8IV56 129 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP8.88□□□□□ -0.99
BRCA1-222ENST00000493919 NEXN-AS1Q8NBZ9 246 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 OTORQ9NRC9 128 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 LINC00527Q9UJ94 153 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 CST7O76096 145 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 NPYP01303 97 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 ACYP1P07311 99 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 CD24P25063 80 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 PSMB2P49721 201 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 ODF3L1Q8IXM7 274 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 TAF15Q92804 592 aaKnown RBP eCLIP8.88□□□□□ -0.996e-6■□□□□ 11.2
BRCA1-222ENST00000493919 SLC25A2Q9BXI2 301 aa8.88□□□□□ -0.99
BRCA1-222ENST00000493919 IGKV1-6A0A0C4DH72 117 aa8.87□□□□□ -0.99
BRCA1-222ENST00000493919 H3BT86 120 aa8.87□□□□□ -0.99
BRCA1-222ENST00000493919 ZNF134P52741 427 aa8.87□□□□□ -0.99
BRCA1-222ENST00000493919 HBG1P69891 147 aa8.87□□□□□ -0.99
BRCA1-222ENST00000493919 HBG2P69892 147 aa8.87□□□□□ -0.99
BRCA1-222ENST00000493919 LINC00173Q6ZV60 143 aa8.87□□□□□ -0.99
BRCA1-222ENST00000493919 RPP25LQ8N5L8 163 aaKnown RBP8.87□□□□□ -0.99
BRCA1-222ENST00000493919 IGKV1D-8A0A087WSZ0 117 aa8.86□□□□□ -0.99
BRCA1-222ENST00000493919 MYMXA0A1B0GTQ4 84 aa8.86□□□□□ -0.99
BRCA1-222ENST00000493919 NCBP2LA6PVI3 153 aaKnown RBP8.86□□□□□ -0.99
BRCA1-222ENST00000493919 FRMD6-AS1P0C7T7 363 aa8.86□□□□□ -0.99
BRCA1-222ENST00000493919 UBE2L3P68036 154 aaKnown RBP8.86□□□□□ -0.99
BRCA1-222ENST00000493919 PCP2Q8IVA1 136 aa8.86□□□□□ -0.99
BRCA1-222ENST00000493919 FMC1Q96HJ9 113 aa8.86□□□□□ -0.99
BRCA1-222ENST00000493919 ZNF747Q9BV97 191 aa8.86□□□□□ -0.99
BRCA1-222ENST00000493919 TMEM170BQ5T4T1 132 aa8.86□□□□□ -0.99
BRCA1-222ENST00000493919 SRSF12Q8WXF0 261 aaKnown RBP8.86□□□□□ -0.99
BRCA1-222ENST00000493919 C11orf52Q96A22 123 aa8.86□□□□□ -0.99
BRCA1-222ENST00000493919 MDFIQ99750 246 aa8.86□□□□□ -0.99
BRCA1-222ENST00000493919 IGHV3-72A0A0B4J1Y9 119 aa8.85□□□□□ -0.99
BRCA1-222ENST00000493919 LGALS9O00182 355 aa8.85□□□□□ -0.99
BRCA1-222ENST00000493919 ZNF816Q0VGE8 651 aaPredicted RBP8.85□□□□□ -0.99
BRCA1-222ENST00000493919 SERTAD4-AS1Q5TG53 156 aa8.85□□□□□ -0.99
BRCA1-222ENST00000493919 PDPNQ86YL7 162 aa8.85□□□□□ -0.99
BRCA1-222ENST00000493919 NXT2Q9NPJ8 142 aaKnown RBP8.85□□□□□ -0.99
BRCA1-222ENST00000493919 TRBV20OR9-2A0A075B6H5 130 aa8.84□□□□□ -0.99
BRCA1-222ENST00000493919 NXPH3O95157 252 aa8.84□□□□□ -0.99
BRCA1-222ENST00000493919 SAA2P0DJI9 122 aaPredicted RBP8.84□□□□□ -0.99
BRCA1-222ENST00000493919 MRPS36P82909 103 aaKnown RBP8.84□□□□□ -0.99
BRCA1-222ENST00000493919 KRTAP21-3Q3LHN1 58 aa8.84□□□□□ -0.99
BRCA1-222ENST00000493919 ABCA11PQ4W5N1 156 aa8.84□□□□□ -0.99
BRCA1-222ENST00000493919 Q8N1Y9 231 aa8.84□□□□□ -0.99
BRCA1-222ENST00000493919 RNF182Q8N6D2 247 aa8.84□□□□□ -0.99
BRCA1-222ENST00000493919 PLEKHA3Q9HB20 300 aa8.84□□□□□ -0.99
BRCA1-222ENST00000493919 IGHV1-3A0A0C4DH29 117 aa8.84□□□□□ -1
BRCA1-222ENST00000493919 ERVK-16P61578 105 aa8.84□□□□□ -1
BRCA1-222ENST00000493919 HIST1H4AP62805 103 aaKnown RBP8.84□□□□□ -1
BRCA1-222ENST00000493919 TENM1Q9UKZ4 2725 aa8.84□□□□□ -1
BRCA1-222ENST00000493919 PGPA6NDG6 321 aa8.83□□□□□ -1
BRCA1-222ENST00000493919 SLC25A20O43772 301 aa8.83□□□□□ -1
BRCA1-222ENST00000493919 ZNF137PP52743 207 aa8.83□□□□□ -1
BRCA1-222ENST00000493919 RPL39P5Q59GN2 51 aa8.83□□□□□ -1
BRCA1-222ENST00000493919 UBE2E2Q96LR5 201 aa8.83□□□□□ -1
BRCA1-222ENST00000493919 IGF2BP2-AS1Q96M15 143 aa8.83□□□□□ -1
BRCA1-222ENST00000493919 ANK2Q01484 3957 aa8.82□□□□□ -1
BRCA1-222ENST00000493919 A6NDX4 124 aa8.82□□□□□ -1
BRCA1-222ENST00000493919 IGKV1D-33P01593 117 aa8.82□□□□□ -1
BRCA1-222ENST00000493919 IGKV1-33P01594 117 aa8.82□□□□□ -1
BRCA1-222ENST00000493919 DUTP33316 252 aaKnown RBP8.82□□□□□ -1
BRCA1-222ENST00000493919 ZNF56Q15929 161 aa8.82□□□□□ -1
BRCA1-222ENST00000493919 UPK3BQ9BT76 320 aa8.82□□□□□ -1
BRCA1-222ENST00000493919 DAZ1Q9NQZ3 744 aaKnown RBP8.82□□□□□ -1
BRCA1-222ENST00000493919 STAB1Q9NY15 2570 aa8.82□□□□□ -1
BRCA1-222ENST00000493919 DAZ2Q13117 558 aaKnown RBP8.82□□□□□ -1
BRCA1-222ENST00000493919 ZNF833PQ6ZTB9 187 aa8.82□□□□□ -1
BRCA1-222ENST00000493919 DAZ4Q86SG3 579 aaKnown RBP8.82□□□□□ -1
BRCA1-222ENST00000493919 C11orf45Q8TAV5 145 aa8.82□□□□□ -1
BRCA1-222ENST00000493919 S1PR3Q99500 378 aa8.82□□□□□ -1
BRCA1-222ENST00000493919 DAZ3Q9NR90 486 aaKnown RBP8.82□□□□□ -1
BRCA1-222ENST00000493919 TRBV25-1A0A075B6N4 114 aa8.81□□□□□ -1
BRCA1-222ENST00000493919 KNCNA6PVL3 124 aa8.81□□□□□ -1
BRCA1-222ENST00000493919 SERP2Q8N6R1 65 aa8.81□□□□□ -1
BRCA1-222ENST00000493919 TRBV7-6A0A0J9YX20 115 aa8.8□□□□□ -1
BRCA1-222ENST00000493919 DEFB121Q5J5C9 76 aa8.8□□□□□ -1
BRCA1-222ENST00000493919 C5orf38Q86SI9 138 aa8.8□□□□□ -1
BRCA1-222ENST00000493919 LINC00643Q86TS7 51 aa8.8□□□□□ -1
BRCA1-222ENST00000493919 TRGV9Q99603 122 aa8.8□□□□□ -1
BRCA1-222ENST00000493919 NABP2Q9BQ15 211 aa8.8□□□□□ -1
BRCA1-222ENST00000493919 SLC25A22Q9H936 323 aa8.8□□□□□ -1
BRCA1-222ENST00000493919 TRBV19A0A075B6N1 114 aa8.8□□□□□ -1
BRCA1-222ENST00000493919 TCRAP04437 139 aa8.8□□□□□ -1
BRCA1-222ENST00000493919 FXYD4P59646 89 aa8.8□□□□□ -1
BRCA1-222ENST00000493919 HERVK_113P61574 105 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 197.2 ms