RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 SLC25A29Q8N8R3 303 aa12.46□□□□□ -0.41
PDLIM7-208ENST00000493815 TCTAP57738 103 aa12.45□□□□□ -0.42
PDLIM7-208ENST00000493815 CACNG7P62955 275 aa12.45□□□□□ -0.42
PDLIM7-208ENST00000493815 PNRC1Q12796 327 aaPredicted RBP12.45□□□□□ -0.42
PDLIM7-208ENST00000493815 SLAQ13239 276 aa12.45□□□□□ -0.42
PDLIM7-208ENST00000493815 TWIST1Q15672 202 aa12.45□□□□□ -0.42
PDLIM7-208ENST00000493815 RNF212Q495C1 297 aa12.45□□□□□ -0.42
PDLIM7-208ENST00000493815 ZFP2Q6ZN57 461 aa12.45□□□□□ -0.42
PDLIM7-208ENST00000493815 C15orf53Q8NAA6 179 aa12.45□□□□□ -0.42
PDLIM7-208ENST00000493815 SEC11CQ9BY50 192 aa12.45□□□□□ -0.42
PDLIM7-208ENST00000493815 A0A096LPF7 62 aa12.44□□□□□ -0.42
PDLIM7-208ENST00000493815 GYPEP15421 78 aa12.44□□□□□ -0.42
PDLIM7-208ENST00000493815 AP1S3Q96PC3 154 aa12.44□□□□□ -0.42
PDLIM7-208ENST00000493815 CNFNQ9BYD5 112 aa12.44□□□□□ -0.42
PDLIM7-208ENST00000493815 GFRA4Q9GZZ7 299 aa12.44□□□□□ -0.42
PDLIM7-208ENST00000493815 Q9UF83 564 aa12.44□□□□□ -0.42
PDLIM7-208ENST00000493815 LY6G6CO95867 125 aa12.43□□□□□ -0.42
PDLIM7-208ENST00000493815 EVI2AP22794 236 aa12.43□□□□□ -0.42
PDLIM7-208ENST00000493815 FOXA3P55318 350 aaPredicted RBP12.43□□□□□ -0.42
PDLIM7-208ENST00000493815 NUP35Q8NFH5 326 aa12.43□□□□□ -0.42
PDLIM7-208ENST00000493815 H3BNG1 76 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 RHODO00212 210 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 CIDEAO60543 219 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 KIF25-AS1Q9Y6Z4 181 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 SMIM27A0A1W2PRY6 76 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 K7EQD1 137 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 SMIM17P0DL12 118 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 P0DMU3 169 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 FAM231AP0DMU4 169 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 FAM231CP0DMU5 169 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 ZNF56Q15929 161 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 WDR73Q6P4I2 378 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 SLC7A5P1Q8MH63 180 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 LINC00476Q8WZB0 136 aa12.42□□□□□ -0.42
PDLIM7-208ENST00000493815 TRBV6-4A0A1B0GX49 114 aa12.41□□□□□ -0.42
PDLIM7-208ENST00000493815 FAM231BA6NCW3 169 aa12.41□□□□□ -0.42
PDLIM7-208ENST00000493815 MGPP08493 103 aa12.41□□□□□ -0.42
PDLIM7-208ENST00000493815 NAT8BQ9UHF3 227 aa12.41□□□□□ -0.42
PDLIM7-208ENST00000493815 ICOSQ9Y6W8 199 aa12.41□□□□□ -0.42
PDLIM7-208ENST00000493815 F5H697 171 aa12.4□□□□□ -0.42
PDLIM7-208ENST00000493815 MT-ND4LP03901 98 aa12.4□□□□□ -0.42
PDLIM7-208ENST00000493815 LINC00315P59091 139 aa12.4□□□□□ -0.42
PDLIM7-208ENST00000493815 C10orf91Q5T1B1 145 aa12.4□□□□□ -0.42
PDLIM7-208ENST00000493815 PRADC1Q9BSG0 188 aa12.4□□□□□ -0.42
PDLIM7-208ENST00000493815 ALMS1Q8TCU4 4167 aa12.39□□□□□ -0.43
PDLIM7-208ENST00000493815 LCE6AA0A183 80 aa12.39□□□□□ -0.43
PDLIM7-208ENST00000493815 A0A1B0GUT8 65 aa12.39□□□□□ -0.43
PDLIM7-208ENST00000493815 TRGC1P0CF51 173 aa12.39□□□□□ -0.43
PDLIM7-208ENST00000493815 RHOHQ15669 191 aa12.39□□□□□ -0.43
PDLIM7-208ENST00000493815 BORCS7Q96B45 105 aa12.39□□□□□ -0.43
PDLIM7-208ENST00000493815 PPP1R2P9O14990 202 aa12.38□□□□□ -0.43
PDLIM7-208ENST00000493815 MRPL23Q16540 153 aaKnown RBP12.38□□□□□ -0.43
PDLIM7-208ENST00000493815 LGALS9CQ6DKI2 356 aa12.38□□□□□ -0.43
PDLIM7-208ENST00000493815 CARHSP1Q9Y2V2 147 aaKnown RBP12.38□□□□□ -0.43
PDLIM7-208ENST00000493815 SACSQ9NZJ4 4579 aa12.38□□□□□ -0.43
PDLIM7-208ENST00000493815 SRIP30626 198 aa12.38□□□□□ -0.43
PDLIM7-208ENST00000493815 FAM3BP58499 235 aaPredicted RBP12.38□□□□□ -0.43
PDLIM7-208ENST00000493815 ESRGQ1W209 222 aa12.38□□□□□ -0.43
PDLIM7-208ENST00000493815 ANAPC16Q96DE5 110 aa12.38□□□□□ -0.43
PDLIM7-208ENST00000493815 GAGE12JA6NER3 117 aa12.37□□□□□ -0.43
PDLIM7-208ENST00000493815 RAB4BP61018 213 aa12.37□□□□□ -0.43
PDLIM7-208ENST00000493815 GAGE1Q13065 139 aa12.37□□□□□ -0.43
PDLIM7-208ENST00000493815 GAGE4Q13068 117 aa12.37□□□□□ -0.43
PDLIM7-208ENST00000493815 GAGE5Q13069 117 aa12.37□□□□□ -0.43
PDLIM7-208ENST00000493815 GAGE13Q4V321 117 aa12.37□□□□□ -0.43
PDLIM7-208ENST00000493815 UBE2DNLQ8IWF7 75 aa12.37□□□□□ -0.43
PDLIM7-208ENST00000493815 DPH3P1Q9H4G8 78 aa12.37□□□□□ -0.43
PDLIM7-208ENST00000493815 DNAH1Q9P2D7 4330 aa12.37□□□□□ -0.43
PDLIM7-208ENST00000493815 LINC00588Q9Y4M8 146 aa12.36□□□□□ -0.43
PDLIM7-208ENST00000493815 HYDINQ4G0P3 5121 aa12.36□□□□□ -0.43
PDLIM7-208ENST00000493815 VPS13DQ5THJ4 4388 aa12.36□□□□□ -0.43
PDLIM7-208ENST00000493815 APOC3P02656 99 aa12.35□□□□□ -0.43
PDLIM7-208ENST00000493815 SUMO4Q6EEV6 95 aa12.35□□□□□ -0.43
PDLIM7-208ENST00000493815 MRPL54Q6P161 138 aaKnown RBP12.35□□□□□ -0.43
PDLIM7-208ENST00000493815 NEGR1Q7Z3B1 354 aa12.35□□□□□ -0.43
PDLIM7-208ENST00000493815 CCL18P55774 89 aa12.35□□□□□ -0.43
PDLIM7-208ENST00000493815 RIGQ13278 110 aa12.35□□□□□ -0.43
PDLIM7-208ENST00000493815 KMT2AQ03164 3969 aa12.34□□□□□ -0.43
PDLIM7-208ENST00000493815 TRAV26-2A0A0B4J265 109 aa12.34□□□□□ -0.43
PDLIM7-208ENST00000493815 CAMPP49913 170 aa12.34□□□□□ -0.43
PDLIM7-208ENST00000493815 SMIM15Q7Z3B0 74 aa12.34□□□□□ -0.43
PDLIM7-208ENST00000493815 CLRN3Q8NCR9 226 aa12.34□□□□□ -0.43
PDLIM7-208ENST00000493815 C7orf77A4D0Y5 90 aa12.33□□□□□ -0.44
PDLIM7-208ENST00000493815 LYPD5Q6UWN5 251 aa12.33□□□□□ -0.44
PDLIM7-208ENST00000493815 ZNRF2Q8NHG8 242 aa12.33□□□□□ -0.44
PDLIM7-208ENST00000493815 M0QY20 66 aa12.32□□□□□ -0.44
PDLIM7-208ENST00000493815 NEXN-AS1Q8NBZ9 246 aa12.32□□□□□ -0.44
PDLIM7-208ENST00000493815 RPS10P5Q9NQ39 176 aa12.32□□□□□ -0.44
PDLIM7-208ENST00000493815 TRBV10-1A0A0K0K1A3 114 aa12.31□□□□□ -0.44
PDLIM7-208ENST00000493815 LINC00694P0DN24 101 aa12.31□□□□□ -0.44
PDLIM7-208ENST00000493815 AMN1Q8IY45 258 aa12.31□□□□□ -0.44
PDLIM7-208ENST00000493815 ATP6V0E2Q8NHE4 81 aa12.31□□□□□ -0.44
PDLIM7-208ENST00000493815 TMEM191AQ9H0A3 160 aa12.31□□□□□ -0.44
PDLIM7-208ENST00000493815 RYR2Q92736 4967 aa12.31□□□□□ -0.44
PDLIM7-208ENST00000493815 NDUFA5Q16718 116 aa12.3□□□□□ -0.44
PDLIM7-208ENST00000493815 GATD1Q8NB37 220 aa12.3□□□□□ -0.44
PDLIM7-208ENST00000493815 CTDSP1Q9GZU7 261 aa12.3□□□□□ -0.44
PDLIM7-208ENST00000493815 TRBV7-3A0A075B6L6 115 aa12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 GAS8-AS1O95177 125 aa12.29□□□□□ -0.44
PDLIM7-208ENST00000493815 HBBP68871 147 aa12.29□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms