RNA–Protein interactions for RNA: ENST00000493786.2

VEGFA-214, Transcript of vascular endothelial growth factor A, humanhuman

TSL 2

Gene VEGFA, Length 551 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-214ENST00000493786 CTDSP1Q9GZU7 261 aa5.37□□□□□ -1.55
VEGFA-214ENST00000493786 PRO0255Q9UI72 69 aa5.37□□□□□ -1.55
VEGFA-214ENST00000493786 IGHV4-4A0A075B6R2 117 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 TRAV26-1A0A087WT03 109 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 A0A087WWL8 130 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 A0A0J9YY99 117 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 SMIM27A0A1W2PRY6 76 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 F5H697 171 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 PAX4O43316 350 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 S100A8P05109 93 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 S100PP25815 95 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 FOXA3P55318 350 aaPredicted RBP5.36□□□□□ -1.55
VEGFA-214ENST00000493786 TCTAP57738 103 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 ZNF56Q15929 161 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 C10orf91Q5T1B1 145 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 CASC10Q5T4H9 136 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 TMEM88Q6PEY1 159 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 KCNIP4Q6PIL6 250 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 C15orf53Q8NAA6 179 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 CLRN3Q8NCR9 226 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 PRADC1Q9BSG0 188 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 CNFNQ9BYD5 112 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 RPS10P5Q9NQ39 176 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 HHLA3Q9XRX5 114 aa5.36□□□□□ -1.55
VEGFA-214ENST00000493786 A0A1B0GW15 77 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 NUDT3O95989 172 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 MGPP08493 103 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 GATA1P15976 413 aaPredicted RBP5.35□□□□□ -1.55
VEGFA-214ENST00000493786 HOXA5P20719 270 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 FHL2Q14192 279 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 RHOHQ15669 191 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 C14orf178Q8N769 122 aaPredicted RBP5.35□□□□□ -1.55
VEGFA-214ENST00000493786 POM121L12Q8N7R1 296 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 NUP35Q8NFH5 326 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 DPH3P1Q9H4G8 78 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 JPT2Q9H910 190 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 MSRB1Q9NZV6 116 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 ICOSQ9Y6W8 199 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 DNAH7Q8WXX0 4024 aa5.35□□□□□ -1.55
VEGFA-214ENST00000493786 A0A087WWC5 75 aa5.34□□□□□ -1.55
VEGFA-214ENST00000493786 TRBV6-4A0A1B0GX49 114 aa5.34□□□□□ -1.55
VEGFA-214ENST00000493786 C7orf77A4D0Y5 90 aa5.34□□□□□ -1.55
VEGFA-214ENST00000493786 H3BNG1 76 aa5.34□□□□□ -1.55
VEGFA-214ENST00000493786 H7C1H1 209 aa5.34□□□□□ -1.55
VEGFA-214ENST00000493786 K7EQD1 137 aa5.34□□□□□ -1.55
VEGFA-214ENST00000493786 CRYGDP07320 174 aa5.34□□□□□ -1.55
VEGFA-214ENST00000493786 CRYBA4P53673 196 aa5.34□□□□□ -1.55
VEGFA-214ENST00000493786 RAB4BP61018 213 aa5.34□□□□□ -1.55
VEGFA-214ENST00000493786 HBBP68871 147 aa5.34□□□□□ -1.55
VEGFA-214ENST00000493786 IMMP2LQ96T52 175 aa5.34□□□□□ -1.55
VEGFA-214ENST00000493786 SAMD10Q9BYL1 202 aa5.34□□□□□ -1.55
VEGFA-214ENST00000493786 GYPEP15421 78 aa5.33□□□□□ -1.56
VEGFA-214ENST00000493786 EVI2AP22794 236 aa5.33□□□□□ -1.56
VEGFA-214ENST00000493786 SRIP30626 198 aa5.33□□□□□ -1.56
VEGFA-214ENST00000493786 CAMPP49913 170 aa5.33□□□□□ -1.56
VEGFA-214ENST00000493786 FAM3BP58499 235 aaPredicted RBP5.33□□□□□ -1.56
VEGFA-214ENST00000493786 MRPL23Q16540 153 aaKnown RBP5.33□□□□□ -1.56
VEGFA-214ENST00000493786 UFSP1Q6NVU6 142 aa5.33□□□□□ -1.56
VEGFA-214ENST00000493786 MRPL54Q6P161 138 aaKnown RBP5.33□□□□□ -1.56
VEGFA-214ENST00000493786 SH2D6Q7Z4S9 175 aa5.33□□□□□ -1.56
VEGFA-214ENST00000493786 ATP5L2Q7Z4Y8 100 aa5.33□□□□□ -1.56
VEGFA-214ENST00000493786 SLC25A29Q8N8R3 303 aa5.33□□□□□ -1.56
VEGFA-214ENST00000493786 SREK1IP1Q8N9Q2 155 aaPredicted RBP5.33□□□□□ -1.56
VEGFA-214ENST00000493786 BTF3L4Q96K17 158 aa5.33□□□□□ -1.56
VEGFA-214ENST00000493786 TMEM242Q9NWH2 141 aa5.33□□□□□ -1.56
VEGFA-214ENST00000493786 MUC4Q99102 2169 aa5.32□□□□□ -1.56
VEGFA-214ENST00000493786 TRAV9-1A0A075B6T8 112 aa5.32□□□□□ -1.56
VEGFA-214ENST00000493786 TRBV10-1A0A0K0K1A3 114 aa5.32□□□□□ -1.56
VEGFA-214ENST00000493786 RPL36AP83881 106 aaKnown RBP5.32□□□□□ -1.56
VEGFA-214ENST00000493786 UBE2DNLQ8IWF7 75 aa5.32□□□□□ -1.56
VEGFA-214ENST00000493786 RPL36ALQ969Q0 106 aaKnown RBP5.32□□□□□ -1.56
VEGFA-214ENST00000493786 VSIG2Q96IQ7 327 aa5.32□□□□□ -1.56
VEGFA-214ENST00000493786 TMEM191AQ9H0A3 160 aa5.32□□□□□ -1.56
VEGFA-214ENST00000493786 APLNQ9ULZ1 77 aa5.32□□□□□ -1.56
VEGFA-214ENST00000493786 URGCP-MRPS24S4R325 110 aa5.32□□□□□ -1.56
VEGFA-214ENST00000493786 GAGE12JA6NER3 117 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 P0DMU3 169 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 FAM231AP0DMU4 169 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 FAM231CP0DMU5 169 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 CCL18P55774 89 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 GAGE1Q13065 139 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 GAGE4Q13068 117 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 GAGE5Q13069 117 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 GAGE13Q4V321 117 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 SUMO4Q6EEV6 95 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 NEGR1Q7Z3B1 354 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 TNFRSF18Q9Y5U5 241 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 KIF25-AS1Q9Y6Z4 181 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 STARD9Q9P2P6 4700 aa5.31□□□□□ -1.56
VEGFA-214ENST00000493786 A0A096LPF7 62 aa5.3□□□□□ -1.56
VEGFA-214ENST00000493786 LOC100131303A0A0U1RQF7 123 aa5.3□□□□□ -1.56
VEGFA-214ENST00000493786 A0A1B0GXF2 115 aa5.3□□□□□ -1.56
VEGFA-214ENST00000493786 RASL11AQ6T310 242 aa5.3□□□□□ -1.56
VEGFA-214ENST00000493786 Q6ZSN1 163 aa5.3□□□□□ -1.56
VEGFA-214ENST00000493786 AMN1Q8IY45 258 aa5.3□□□□□ -1.56
VEGFA-214ENST00000493786 ATP6V0E2Q8NHE4 81 aa5.3□□□□□ -1.56
VEGFA-214ENST00000493786 FRZBQ92765 325 aa5.3□□□□□ -1.56
VEGFA-214ENST00000493786 MRAP2Q96G30 205 aa5.3□□□□□ -1.56
VEGFA-214ENST00000493786 TRBV7-3A0A075B6L6 115 aa5.29□□□□□ -1.56
VEGFA-214ENST00000493786 TRAV26-2A0A0B4J265 109 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms