RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 CEND1Q8N111 149 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 MAPK1IP1LQ8NDC0 245 aa7.17□□□□□ -1.26
NPHP3-209ENST00000493732 CSPG4Q6UVK1 2322 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 TRAV8-6A0A0B4J262 113 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 PRSS29PA6NIE9 313 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 A8MTW9 85 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 E9PLD3 99 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 SPRY2O43597 315 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 PMVKQ15126 192 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 SPINK13Q1W4C9 94 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 AMTNQ6UX39 209 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 OR5A1Q8NGJ0 315 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 Q96MF0 132 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 BBC3Q96PG8 261 aaPredicted RBP7.16□□□□□ -1.26
NPHP3-209ENST00000493732 DUX5Q96PT3 197 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 EDA2RQ9HAV5 297 aa7.16□□□□□ -1.26
NPHP3-209ENST00000493732 ZNF256Q9Y2P7 627 aaPredicted RBP7.16□□□□□ -1.26
NPHP3-209ENST00000493732 PRRC2AP48634 2157 aaKnown RBP7.16□□□□□ -1.26
NPHP3-209ENST00000493732 A0A087WWL8 130 aa7.15□□□□□ -1.26
NPHP3-209ENST00000493732 MYMXA0A1B0GTQ4 84 aa7.15□□□□□ -1.26
NPHP3-209ENST00000493732 IGKV3-20P01619 116 aa7.15□□□□□ -1.26
NPHP3-209ENST00000493732 FABP2P12104 132 aa7.15□□□□□ -1.26
NPHP3-209ENST00000493732 ZNF56Q15929 161 aa7.15□□□□□ -1.26
NPHP3-209ENST00000493732 ZNF876PQ49A33 203 aa7.15□□□□□ -1.26
NPHP3-209ENST00000493732 PTH2Q96A98 100 aa7.15□□□□□ -1.26
NPHP3-209ENST00000493732 TP53TG1Q9Y2A0 90 aa7.15□□□□□ -1.26
NPHP3-209ENST00000493732 MYO18BQ8IUG5 2567 aa7.15□□□□□ -1.26
NPHP3-209ENST00000493732 CSMD1Q96PZ7 3565 aa7.15□□□□□ -1.27
NPHP3-209ENST00000493732 TRAV12-2A0A075B6T6 113 aa7.15□□□□□ -1.27
NPHP3-209ENST00000493732 IGIPA6NJ69 53 aa7.15□□□□□ -1.27
NPHP3-209ENST00000493732 H3BUT2 72 aa7.15□□□□□ -1.27
NPHP3-209ENST00000493732 M0QY20 66 aa7.15□□□□□ -1.27
NPHP3-209ENST00000493732 CRYGDP07320 174 aa7.15□□□□□ -1.27
NPHP3-209ENST00000493732 NSUN5P1Q3KNT7 163 aa7.15□□□□□ -1.27
NPHP3-209ENST00000493732 FAM74A4Q5TZK3 123 aa7.15□□□□□ -1.27
NPHP3-209ENST00000493732 MDFICQ9P1T7 246 aa7.15□□□□□ -1.27
NPHP3-209ENST00000493732 SELENOKQ9Y6D0 94 aa7.15□□□□□ -1.27
NPHP3-209ENST00000493732 A0A1W2PPM0 123 aa7.14□□□□□ -1.27
NPHP3-209ENST00000493732 GAGE12BA1L429 117 aa7.14□□□□□ -1.27
NPHP3-209ENST00000493732 K7EP34 96 aa7.14□□□□□ -1.27
NPHP3-209ENST00000493732 SCGB2A2Q13296 93 aa7.14□□□□□ -1.27
NPHP3-209ENST00000493732 HIST1H4GQ99525 98 aa7.14□□□□□ -1.27
NPHP3-209ENST00000493732 LINC00467Q9BRT7 94 aa7.14□□□□□ -1.27
NPHP3-209ENST00000493732 ANKRD17O75179 2603 aaKnown RBP7.14□□□□□ -1.27
NPHP3-209ENST00000493732 FLNCQ14315 2725 aa7.14□□□□□ -1.27
NPHP3-209ENST00000493732 COL12A1Q99715 3063 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 TRAV25A0A0B4J276 109 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 A8MWV9 139 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 I3L3M4 83 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 SAMD5Q5TGI4 173 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 UFSP1Q6NVU6 142 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 DYNLRB2Q8TF09 96 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 CLUHP3Q96NS8 147 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 SPAG8Q99932 426 aaPredicted RBP7.13□□□□□ -1.27
NPHP3-209ENST00000493732 JPT2Q9H910 190 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 MUC4Q99102 2169 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 H3BMM0 161 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 K7ERU9 68 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 FXYD2P54710 66 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 SLURP1P55000 103 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 DEFB131AP59861 70 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 KRTAP10-9P60411 292 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 ZNF415Q09FC8 603 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 MAPKAPK5-AS1Q8N8E1 139 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 RAX2Q96IS3 184 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 CST9LQ9H4G1 147 aa7.13□□□□□ -1.27
NPHP3-209ENST00000493732 C11orf86A6NJI1 115 aa7.12□□□□□ -1.27
NPHP3-209ENST00000493732 RAB37Q96AX2 223 aa7.12□□□□□ -1.27
NPHP3-209ENST00000493732 PRADC1Q9BSG0 188 aa7.12□□□□□ -1.27
NPHP3-209ENST00000493732 TTTY13Q9BZ97 58 aa7.12□□□□□ -1.27
NPHP3-209ENST00000493732 SPCS1Q9Y6A9 102 aa7.12□□□□□ -1.27
NPHP3-209ENST00000493732 CR1P17927 2039 aa7.11□□□□□ -1.27
NPHP3-209ENST00000493732 M0R2P5 195 aa7.11□□□□□ -1.27
NPHP3-209ENST00000493732 RHODO00212 210 aa7.11□□□□□ -1.27
NPHP3-209ENST00000493732 CRYBA4P53673 196 aa7.11□□□□□ -1.27
NPHP3-209ENST00000493732 LCE2DQ5TA82 110 aaPredicted RBP7.11□□□□□ -1.27
NPHP3-209ENST00000493732 NEGR1Q7Z3B1 354 aa7.11□□□□□ -1.27
NPHP3-209ENST00000493732 SPXQ9BT56 116 aa7.11□□□□□ -1.27
NPHP3-209ENST00000493732 NHP2Q9NX24 153 aaKnown RBP7.11□□□□□ -1.27
NPHP3-209ENST00000493732 KHDC1LQ5JSQ8 128 aa7.11□□□□□ -1.27
NPHP3-209ENST00000493732 SCGB1D4Q6XE38 83 aa7.11□□□□□ -1.27
NPHP3-209ENST00000493732 TMEM61Q8N0U2 210 aa7.11□□□□□ -1.27
NPHP3-209ENST00000493732 C20orf203Q8NBC4 194 aa7.11□□□□□ -1.27
NPHP3-209ENST00000493732 KLHL30-AS1Q8NEE0 82 aa7.11□□□□□ -1.27
NPHP3-209ENST00000493732 DUX3Q96PT4 197 aa7.11□□□□□ -1.27
NPHP3-209ENST00000493732 FAM208BQ5VWN6 2430 aa7.1□□□□□ -1.27
NPHP3-209ENST00000493732 TRBV7-3A0A075B6L6 115 aa7.1□□□□□ -1.27
NPHP3-209ENST00000493732 KNCNA6PVL3 124 aa7.1□□□□□ -1.27
NPHP3-209ENST00000493732 ZNF815PA8K554 130 aa7.1□□□□□ -1.27
NPHP3-209ENST00000493732 TSHBP01222 138 aa7.1□□□□□ -1.27
NPHP3-209ENST00000493732 CMC4P56277 68 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-209ENST00000493732 DEFB114Q30KQ6 69 aa7.1□□□□□ -1.27
NPHP3-209ENST00000493732 OCIAD2Q56VL3 154 aa7.1□□□□□ -1.27
NPHP3-209ENST00000493732 NFE4Q86UQ8 179 aa7.1□□□□□ -1.27
NPHP3-209ENST00000493732 RNASE8Q8TDE3 154 aaKnown RBP7.1□□□□□ -1.27
NPHP3-209ENST00000493732 USP9YO00507 2555 aaPredicted RBP7.1□□□□□ -1.27
NPHP3-209ENST00000493732 ZNF462Q96JM2 2506 aa7.1□□□□□ -1.27
NPHP3-209ENST00000493732 SVEP1Q4LDE5 3571 aa7.1□□□□□ -1.27
NPHP3-209ENST00000493732 IGLV4-69A0A075B6H9 119 aa7.09□□□□□ -1.27
NPHP3-209ENST00000493732 A0A1B0GWB2 263 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms