RNA–Protein interactions for RNA: ENST00000493518.5

CACUL1-206, Transcript of CDK2 associated cullin domain 1, humanhuman

TSL 1 (best)

Gene CACUL1, Length 3,217 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACUL1-206ENST00000493518 LMO4P61968 165 aa11.77□□□□□ -0.52
CACUL1-206ENST00000493518 GPHB5Q86YW7 130 aa11.77□□□□□ -0.52
CACUL1-206ENST00000493518 PRRC2AP48634 2157 aaKnown RBP11.77□□□□□ -0.53
CACUL1-206ENST00000493518 NPC2P61916 151 aa11.77□□□□□ -0.53
CACUL1-206ENST00000493518 ANKRD17O75179 2603 aaKnown RBP11.77□□□□□ -0.53
CACUL1-206ENST00000493518 RBAKDNA6NC62 111 aa11.77□□□□□ -0.53
CACUL1-206ENST00000493518 J3QR89 54 aa11.77□□□□□ -0.53
CACUL1-206ENST00000493518 KLRB1Q12918 225 aa11.77□□□□□ -0.53
CACUL1-206ENST00000493518 C9orf139Q6ZV77 190 aa11.77□□□□□ -0.53
CACUL1-206ENST00000493518 OOSP1A8MZH6 123 aa11.76□□□□□ -0.53
CACUL1-206ENST00000493518 FN1P02751 2386 aaKnown RBP11.76□□□□□ -0.53
CACUL1-206ENST00000493518 PSMG4Q5JS54 123 aa11.76□□□□□ -0.53
CACUL1-206ENST00000493518 NRGNQ92686 78 aa11.76□□□□□ -0.53
CACUL1-206ENST00000493518 NF1P21359 2839 aa11.76□□□□□ -0.53
CACUL1-206ENST00000493518 RNASE3P12724 160 aaKnown RBP11.75□□□□□ -0.53
CACUL1-206ENST00000493518 NEXN-AS1Q8NBZ9 246 aa11.75□□□□□ -0.53
CACUL1-206ENST00000493518 MOB4Q9Y3A3 225 aa11.75□□□□□ -0.53
CACUL1-206ENST00000493518 TRBV7-3A0A075B6L6 115 aa11.75□□□□□ -0.53
CACUL1-206ENST00000493518 IGHV4-61A0A0C4DH41 118 aa11.75□□□□□ -0.53
CACUL1-206ENST00000493518 NDUFS8O00217 210 aa11.75□□□□□ -0.53
CACUL1-206ENST00000493518 SYT8Q8NBV8 401 aa11.75□□□□□ -0.53
CACUL1-206ENST00000493518 PSMG3-AS1Q96PY0 264 aa11.75□□□□□ -0.53
CACUL1-206ENST00000493518 MORN3Q6PF18 240 aaPredicted RBP11.74□□□□□ -0.53
CACUL1-206ENST00000493518 CLEC2AQ6UVW9 174 aa11.74□□□□□ -0.53
CACUL1-206ENST00000493518 MRAP2Q96G30 205 aa11.74□□□□□ -0.53
CACUL1-206ENST00000493518 MDFICQ9P1T7 246 aa11.74□□□□□ -0.53
CACUL1-206ENST00000493518 SDHAF1A6NFY7 115 aa11.74□□□□□ -0.53
CACUL1-206ENST00000493518 SPINK13Q1W4C9 94 aa11.74□□□□□ -0.53
CACUL1-206ENST00000493518 TOMM6Q96B49 74 aa11.74□□□□□ -0.53
CACUL1-206ENST00000493518 KNCNA6PVL3 124 aa11.73□□□□□ -0.53
CACUL1-206ENST00000493518 Q1RN00 199 aa11.73□□□□□ -0.53
CACUL1-206ENST00000493518 MXRA5Q9NR99 2828 aa11.73□□□□□ -0.53
CACUL1-206ENST00000493518 TRAV2A0A0B4J234 112 aa11.73□□□□□ -0.53
CACUL1-206ENST00000493518 F8W1H4 67 aa11.73□□□□□ -0.53
CACUL1-206ENST00000493518 C1orf122Q6ZSJ8 110 aa11.73□□□□□ -0.53
CACUL1-206ENST00000493518 ZNF580Q9UK33 172 aa11.73□□□□□ -0.53
CACUL1-206ENST00000493518 CHD6Q8TD26 2715 aa11.73□□□□□ -0.53
CACUL1-206ENST00000493518 SUMO4Q6EEV6 95 aa11.73□□□□□ -0.53
CACUL1-206ENST00000493518 KIR2DL4Q99706 377 aa11.73□□□□□ -0.53
CACUL1-206ENST00000493518 FBXL19-AS1Q494R0 122 aa11.72□□□□□ -0.53
CACUL1-206ENST00000493518 PRSS2P07478 247 aa11.72□□□□□ -0.53
CACUL1-206ENST00000493518 TSPEAR-AS2P59090 65 aa11.72□□□□□ -0.53
CACUL1-206ENST00000493518 NIPBLQ6KC79 2804 aaeCLIP11.71□□□□□ -0.53
CACUL1-206ENST00000493518 IGHV4-39P01824 125 aa11.71□□□□□ -0.53
CACUL1-206ENST00000493518 SRSF2Q01130 221 aaKnown RBP11.71□□□□□ -0.53
CACUL1-206ENST00000493518 CEMP1Q6PRD7 247 aaPredicted RBP11.71□□□□□ -0.53
CACUL1-206ENST00000493518 ACANP16112 2415 aa11.7□□□□□ -0.54
CACUL1-206ENST00000493518 TSPAN13O95857 204 aa11.7□□□□□ -0.54
CACUL1-206ENST00000493518 GNLYP22749 145 aa11.7□□□□□ -0.54
CACUL1-206ENST00000493518 ITLN2Q8WWU7 325 aaPredicted RBP11.7□□□□□ -0.54
CACUL1-206ENST00000493518 TEX15Q9BXT5 2789 aa11.7□□□□□ -0.54
CACUL1-206ENST00000493518 OVOL1O14753 267 aa11.7□□□□□ -0.54
CACUL1-206ENST00000493518 TSHBP01222 138 aa11.7□□□□□ -0.54
CACUL1-206ENST00000493518 CRYGDP07320 174 aa11.7□□□□□ -0.54
CACUL1-206ENST00000493518 P0DMU3 169 aa11.7□□□□□ -0.54
CACUL1-206ENST00000493518 FAM231AP0DMU4 169 aa11.7□□□□□ -0.54
CACUL1-206ENST00000493518 FAM231CP0DMU5 169 aa11.7□□□□□ -0.54
CACUL1-206ENST00000493518 ZNF462Q96JM2 2506 aa11.7□□□□□ -0.54
CACUL1-206ENST00000493518 PIFOQ8TCI5 191 aa11.69□□□□□ -0.54
CACUL1-206ENST00000493518 IGHV1-69DA0A0B4J2H0 117 aa11.69□□□□□ -0.54
CACUL1-206ENST00000493518 IGHV1-69P01742 117 aa11.69□□□□□ -0.54
CACUL1-206ENST00000493518 LGALS3P17931 250 aaKnown RBP11.69□□□□□ -0.54
CACUL1-206ENST00000493518 A0A0U1RRA0 63 aa11.68□□□□□ -0.54
CACUL1-206ENST00000493518 HERVK_113P61574 105 aa11.68□□□□□ -0.54
CACUL1-206ENST00000493518 NFE4Q86UQ8 179 aa11.68□□□□□ -0.54
CACUL1-206ENST00000493518 DLX4Q92988 240 aaPredicted RBP11.68□□□□□ -0.54
CACUL1-206ENST00000493518 SPXQ9BT56 116 aa11.68□□□□□ -0.54
CACUL1-206ENST00000493518 U3KQE9 123 aa11.68□□□□□ -0.54
CACUL1-206ENST00000493518 ZNRF2Q8NHG8 242 aa11.68□□□□□ -0.54
CACUL1-206ENST00000493518 DOPEY1Q5JWR5 2465 aa11.68□□□□□ -0.54
CACUL1-206ENST00000493518 LINC01546A6NGU7 62 aa11.67□□□□□ -0.54
CACUL1-206ENST00000493518 ATP5J2P56134 94 aa11.67□□□□□ -0.54
CACUL1-206ENST00000493518 NOTCH2Q04721 2471 aa11.67□□□□□ -0.54
CACUL1-206ENST00000493518 TMEM238LA0A1B0GVL6 79 aa11.67□□□□□ -0.54
CACUL1-206ENST00000493518 A6NJY4 79 aa11.67□□□□□ -0.54
CACUL1-206ENST00000493518 RNF223E7ERA6 249 aa11.67□□□□□ -0.54
CACUL1-206ENST00000493518 NBL1P41271 181 aa11.67□□□□□ -0.54
CACUL1-206ENST00000493518 SMCPP49901 116 aaPredicted RBP11.67□□□□□ -0.54
CACUL1-206ENST00000493518 PROK1P58294 105 aa11.67□□□□□ -0.54
CACUL1-206ENST00000493518 TRPT1Q86TN4 253 aaKnown RBP11.67□□□□□ -0.54
CACUL1-206ENST00000493518 TMEM190Q8WZ59 177 aa11.67□□□□□ -0.54
CACUL1-206ENST00000493518 TRAV12-1A0A0B4J245 112 aa11.66□□□□□ -0.54
CACUL1-206ENST00000493518 A8MZ25 164 aa11.66□□□□□ -0.54
CACUL1-206ENST00000493518 NDUFA4O00483 81 aa11.66□□□□□ -0.54
CACUL1-206ENST00000493518 TCL1BO95988 128 aa11.66□□□□□ -0.54
CACUL1-206ENST00000493518 SYNJ2BPP57105 145 aa11.66□□□□□ -0.54
CACUL1-206ENST00000493518 DAZ1Q9NQZ3 744 aaKnown RBP11.66□□□□□ -0.54
CACUL1-206ENST00000493518 A0A0J9YXV3 536 aa11.66□□□□□ -0.54
CACUL1-206ENST00000493518 MT-ATP8P03928 68 aa11.66□□□□□ -0.54
CACUL1-206ENST00000493518 PMVKQ15126 192 aa11.66□□□□□ -0.54
CACUL1-206ENST00000493518 KHDC1LQ5JSQ8 128 aa11.66□□□□□ -0.54
CACUL1-206ENST00000493518 DUX3Q96PT4 197 aa11.66□□□□□ -0.54
CACUL1-206ENST00000493518 FAM223BA6NKX1 122 aa11.65□□□□□ -0.54
CACUL1-206ENST00000493518 ZNF876PQ49A33 203 aa11.65□□□□□ -0.54
CACUL1-206ENST00000493518 FAM223AQ8IWN6 122 aa11.65□□□□□ -0.54
CACUL1-206ENST00000493518 IGLV4-69A0A075B6H9 119 aa11.65□□□□□ -0.54
CACUL1-206ENST00000493518 CKS1BP61024 79 aa11.65□□□□□ -0.54
CACUL1-206ENST00000493518 TAL2Q16559 108 aa11.65□□□□□ -0.54
CACUL1-206ENST00000493518 Q8N1Y9 231 aa11.65□□□□□ -0.54
CACUL1-206ENST00000493518 IGHV4-4A0A075B6R2 117 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms