RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	TAGLN2	P37802	199 aa	Known RBP	10.28	□□□□□ -0.76
MRPL55-231	ENST00000492170	ZNF674	Q2M3X9	581 aa		10.28	□□□□□ -0.76
MRPL55-231	ENST00000492170	LELP1	Q5T871	98 aa		10.28	□□□□□ -0.76
MRPL55-231	ENST00000492170	DMBT1	Q9UGM3	2413 aa	Predicted RBP	10.28	□□□□□ -0.76
MRPL55-231	ENST00000492170	PDE6D	O43924	150 aa		10.27	□□□□□ -0.77
MRPL55-231	ENST00000492170	MGST1	P10620	155 aa	Known RBP	10.27	□□□□□ -0.77
MRPL55-231	ENST00000492170	ZNF506	Q5JVG8	444 aa		10.27	□□□□□ -0.77
MRPL55-231	ENST00000492170	ATP6V0E2	Q8NHE4	81 aa		10.27	□□□□□ -0.77
MRPL55-231	ENST00000492170	PTH2	Q96A98	100 aa		10.27	□□□□□ -0.77
MRPL55-231	ENST00000492170	TMEM70	Q9BUB7	260 aa		10.27	□□□□□ -0.77
MRPL55-231	ENST00000492170	GTSF1L	Q9H1H1	148 aa		10.27	□□□□□ -0.77
MRPL55-231	ENST00000492170	VAX2	Q9UIW0	290 aa		10.27	□□□□□ -0.77
MRPL55-231	ENST00000492170	MYCBP2	O75592	4640 aa		10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	PGPEP1L	A6NFU8	196 aa		10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	SH2D1A	O60880	128 aa		10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	IGHV3-30	P01768	117 aa		10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	IGHV3-33	P01772	117 aa		10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	SMR3B	P02814	79 aa	Predicted RBP	10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	IGHV3-30-3	P0DP02	117 aa		10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	IGHV3-30-5	P0DP03	117 aa		10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	RNASE3	P12724	160 aa	Known RBP	10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	RPL35	P42766	123 aa	Known RBP	10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	DNLZ	Q5SXM8	178 aa		10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	FAM162B	Q5T6X4	162 aa		10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170		Q8N814	137 aa		10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	DERL1	Q9BUN8	251 aa		10.26	□□□□□ -0.77
MRPL55-231	ENST00000492170	FAM229A	H3BQW9	127 aa		10.25	□□□□□ -0.77
MRPL55-231	ENST00000492170	HAMP	P81172	84 aa		10.25	□□□□□ -0.77
MRPL55-231	ENST00000492170	LAGE3	Q14657	143 aa		10.25	□□□□□ -0.77
MRPL55-231	ENST00000492170	LINC01559	Q495D7	138 aa		10.25	□□□□□ -0.77
MRPL55-231	ENST00000492170	BAGE2	Q86Y30	109 aa		10.25	□□□□□ -0.77
MRPL55-231	ENST00000492170	KRBOX1	C9JBD0	128 aa		10.24	□□□□□ -0.77
MRPL55-231	ENST00000492170	S100A4	P26447	101 aa	Known RBP	10.24	□□□□□ -0.77
MRPL55-231	ENST00000492170	TM2D2	Q9BX73	214 aa		10.24	□□□□□ -0.77
MRPL55-231	ENST00000492170	DNAH8	Q96JB1	4490 aa		10.23	□□□□□ -0.77
MRPL55-231	ENST00000492170		A8MWV9	139 aa		10.23	□□□□□ -0.77
MRPL55-231	ENST00000492170		B4DEV8	164 aa		10.23	□□□□□ -0.77
MRPL55-231	ENST00000492170	IGLV2-8	P01709	118 aa		10.23	□□□□□ -0.77
MRPL55-231	ENST00000492170	CENPW	Q5EE01	88 aa		10.23	□□□□□ -0.77
MRPL55-231	ENST00000492170	TEX261	Q6UWH6	196 aa		10.23	□□□□□ -0.77
MRPL55-231	ENST00000492170	ZFP2	Q6ZN57	461 aa		10.23	□□□□□ -0.77
MRPL55-231	ENST00000492170		Q6ZSN1	163 aa		10.23	□□□□□ -0.77
MRPL55-231	ENST00000492170	SMIM12	Q96EX1	92 aa		10.23	□□□□□ -0.77
MRPL55-231	ENST00000492170	PARL	Q9H300	379 aa		10.23	□□□□□ -0.77
MRPL55-231	ENST00000492170	IL36B	Q9NZH7	164 aa		10.23	□□□□□ -0.77
MRPL55-231	ENST00000492170	TRBV20OR9-2	A0A075B6H5	130 aa		10.22	□□□□□ -0.77
MRPL55-231	ENST00000492170	ASIP	P42127	132 aa		10.22	□□□□□ -0.77
MRPL55-231	ENST00000492170	PIK3CD-AS1	Q5SR53	167 aa		10.22	□□□□□ -0.77
MRPL55-231	ENST00000492170	SRRM2	Q9UQ35	2752 aa	Known RBP	10.22	□□□□□ -0.77
MRPL55-231	ENST00000492170	GAGE12J	A6NER3	117 aa		10.21	□□□□□ -0.77
MRPL55-231	ENST00000492170	RBFOX3	A6NFN3	312 aa		10.21	□□□□□ -0.77
MRPL55-231	ENST00000492170		M0R036	132 aa		10.21	□□□□□ -0.77
MRPL55-231	ENST00000492170	NDUFS6	O75380	124 aa	Known RBP	10.21	□□□□□ -0.77
MRPL55-231	ENST00000492170	CXCL1	P09341	107 aa		10.21	□□□□□ -0.77
MRPL55-231	ENST00000492170	GAGE1	Q13065	139 aa		10.21	□□□□□ -0.77
MRPL55-231	ENST00000492170	GAGE4	Q13068	117 aa		10.21	□□□□□ -0.77
MRPL55-231	ENST00000492170	GAGE5	Q13069	117 aa		10.21	□□□□□ -0.77
MRPL55-231	ENST00000492170	GAGE13	Q4V321	117 aa		10.21	□□□□□ -0.77
MRPL55-231	ENST00000492170	MED9	Q9NWA0	146 aa		10.21	□□□□□ -0.77
MRPL55-231	ENST00000492170	TRAV8-3	A0A0A6YYJ7	113 aa		10.2	□□□□□ -0.78
MRPL55-231	ENST00000492170	RAB19	A4D1S5	217 aa		10.2	□□□□□ -0.78
MRPL55-231	ENST00000492170	TMEM250	H0YL14	139 aa		10.2	□□□□□ -0.78
MRPL55-231	ENST00000492170	LINC00694	P0DN24	101 aa		10.2	□□□□□ -0.78
MRPL55-231	ENST00000492170	FLG2	Q5D862	2391 aa	Predicted RBP	10.2	□□□□□ -0.78
MRPL55-231	ENST00000492170	TOR2A	Q5JU69	321 aa		10.2	□□□□□ -0.78
MRPL55-231	ENST00000492170	FAM210A	Q96ND0	272 aa		10.2	□□□□□ -0.78
MRPL55-231	ENST00000492170		A0A087WWC5	75 aa		10.19	□□□□□ -0.78
MRPL55-231	ENST00000492170		H3BVH4	76 aa		10.19	□□□□□ -0.78
MRPL55-231	ENST00000492170	GNG4	P50150	75 aa		10.19	□□□□□ -0.78
MRPL55-231	ENST00000492170		Q8N3U1	123 aa		10.19	□□□□□ -0.78
MRPL55-231	ENST00000492170	GRIFIN	A4D1Z8	144 aa		10.18	□□□□□ -0.78
MRPL55-231	ENST00000492170	C19orf71	A6NCJ1	209 aa		10.18	□□□□□ -0.78
MRPL55-231	ENST00000492170	RHOD	O00212	210 aa		10.18	□□□□□ -0.78
MRPL55-231	ENST00000492170	ARMS2	P0C7Q2	107 aa		10.18	□□□□□ -0.78
MRPL55-231	ENST00000492170	PRR27	Q6MZM9	219 aa		10.18	□□□□□ -0.78
MRPL55-231	ENST00000492170	SYT8	Q8NBV8	401 aa		10.18	□□□□□ -0.78
MRPL55-231	ENST00000492170	FAM30A	Q9NZY2	134 aa		10.18	□□□□□ -0.78
MRPL55-231	ENST00000492170	TMSB15B	A0A087X1C1	80 aa		10.17	□□□□□ -0.78
MRPL55-231	ENST00000492170	RPL19	P84098	196 aa	Known RBP	10.17	□□□□□ -0.78
MRPL55-231	ENST00000492170	WFDC2	Q14508	124 aa		10.17	□□□□□ -0.78
MRPL55-231	ENST00000492170	UFSP1	Q6NVU6	142 aa		10.17	□□□□□ -0.78
MRPL55-231	ENST00000492170	DAZ4	Q86SG3	579 aa	Known RBP	10.17	□□□□□ -0.78
MRPL55-231	ENST00000492170	JPT2	Q9H910	190 aa		10.17	□□□□□ -0.78
MRPL55-231	ENST00000492170	DAZ3	Q9NR90	486 aa	Known RBP	10.17	□□□□□ -0.78
MRPL55-231	ENST00000492170	COX11	Q9Y6N1	276 aa		10.17	□□□□□ -0.78
MRPL55-231	ENST00000492170	C14orf178	Q8N769	122 aa	Predicted RBP	10.16	□□□□□ -0.78
MRPL55-231	ENST00000492170	SAMD10	Q9BYL1	202 aa		10.16	□□□□□ -0.78
MRPL55-231	ENST00000492170	BIN3	Q9NQY0	253 aa		10.16	□□□□□ -0.78
MRPL55-231	ENST00000492170	URGCP-MRPS24	S4R325	110 aa		10.16	□□□□□ -0.78
MRPL55-231	ENST00000492170	LECT2	O14960	151 aa		10.15	□□□□□ -0.78
MRPL55-231	ENST00000492170	SNAI2	O43623	268 aa		10.15	□□□□□ -0.78
MRPL55-231	ENST00000492170	FAM74A4	Q5TZK3	123 aa		10.15	□□□□□ -0.78
MRPL55-231	ENST00000492170	DMRTA1	Q5VZB9	504 aa		10.15	□□□□□ -0.78
MRPL55-231	ENST00000492170	RMI2	Q96E14	147 aa		10.15	□□□□□ -0.78
MRPL55-231	ENST00000492170	SSBP4	Q9BWG4	385 aa	Predicted RBP	10.15	□□□□□ -0.78
MRPL55-231	ENST00000492170	EIF5A2	Q9GZV4	153 aa	Known RBP	10.15	□□□□□ -0.78
MRPL55-231	ENST00000492170	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	10.14	□□□□□ -0.79
MRPL55-231	ENST00000492170	OR5AL1	P0C617	328 aa		10.14	□□□□□ -0.79
MRPL55-231	ENST00000492170		Q6ZSA8	131 aa		10.14	□□□□□ -0.79
MRPL55-231	ENST00000492170		Q9UF83	564 aa		10.14	□□□□□ -0.79

Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms