RNA–Protein interactions for RNA: ENST00000491445.1

NCBP1-204, Transcript of nuclear cap binding protein subunit 1, human

TSL 3

Gene NCBP1, Length 300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NCBP1-204	ENST00000491445	RBX1	P62877	108 aa		4.14	□□□□□ -1.75
NCBP1-204	ENST00000491445	REG3A	Q06141	175 aa		4.14	□□□□□ -1.75
NCBP1-204	ENST00000491445	TMEM97	Q5BJF2	176 aa		4.14	□□□□□ -1.75
NCBP1-204	ENST00000491445	CFAP161	Q6P656	301 aa		4.14	□□□□□ -1.75
NCBP1-204	ENST00000491445	C15orf56	Q8N910	161 aa		4.14	□□□□□ -1.75
NCBP1-204	ENST00000491445	AP3S1	Q92572	193 aa		4.14	□□□□□ -1.75
NCBP1-204	ENST00000491445	SLIRP	Q9GZT3	109 aa	Known RBP	4.14	□□□□□ -1.75
NCBP1-204	ENST00000491445	TREM1	Q9NP99	234 aa		4.14	□□□□□ -1.75
NCBP1-204	ENST00000491445	LYRM2	Q9NU23	88 aa	Predicted RBP	4.14	□□□□□ -1.75
NCBP1-204	ENST00000491445		F6UZH7	168 aa		4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	PTTG1	O95997	202 aa		4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	S100A10	P60903	97 aa		4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	LSM3	P62310	102 aa	Known RBP	4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	SPCS2	Q15005	226 aa		4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	LGALSL	Q3ZCW2	172 aa	Predicted RBP	4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	SUN5	Q8TC36	379 aa		4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	MITD1	Q8WV92	249 aa		4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	DIRAS2	Q96HU8	199 aa		4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	CHCHD5	Q9BSY4	110 aa		4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	VCX3B	Q9H321	246 aa		4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	UQCC1	Q9NVA1	299 aa		4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	OR5AC2	Q9NZP5	309 aa		4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	CARHSP1	Q9Y2V2	147 aa	Known RBP	4.13	□□□□□ -1.75
NCBP1-204	ENST00000491445	GVQW2	A0A096LPI5	108 aa	Predicted RBP	4.12	□□□□□ -1.75
NCBP1-204	ENST00000491445	C7orf66	A4D0T2	115 aa		4.12	□□□□□ -1.75
NCBP1-204	ENST00000491445	IGLV7-43	P04211	117 aa		4.12	□□□□□ -1.75
NCBP1-204	ENST00000491445	ZNF80	P51504	273 aa	Predicted RBP	4.12	□□□□□ -1.75
NCBP1-204	ENST00000491445	RAN	P62826	216 aa	Known RBP	4.12	□□□□□ -1.75
NCBP1-204	ENST00000491445	PPP1R1A	Q13522	171 aa		4.12	□□□□□ -1.75
NCBP1-204	ENST00000491445	NEDD8	Q15843	81 aa		4.12	□□□□□ -1.75
NCBP1-204	ENST00000491445	CLPSL2	Q6UWE3	100 aa		4.12	□□□□□ -1.75
NCBP1-204	ENST00000491445	MIR17HG	Q75NE6	70 aa		4.12	□□□□□ -1.75
NCBP1-204	ENST00000491445	SLC25A21	Q9BQT8	299 aa	Predicted RBP	4.12	□□□□□ -1.75
NCBP1-204	ENST00000491445	JPT2	Q9H910	190 aa		4.12	□□□□□ -1.75
NCBP1-204	ENST00000491445	IL36B	Q9NZH7	164 aa		4.12	□□□□□ -1.75
NCBP1-204	ENST00000491445		A0A1B0GUV1	79 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	MBP	P02686	304 aa	Predicted RBP	4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	MT-ND6	P03923	174 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	CFC1B	P0CG36	223 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	UBE2D1	P51668	147 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	NCS1	P62166	190 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	GCSAML	Q5JQS6	135 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	DNLZ	Q5SXM8	178 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	PRR27	Q6MZM9	219 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	NTM-AS1	Q6ZSK4	140 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	C20orf203	Q8NBC4	194 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	SFRP2	Q96HF1	295 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	GFRA4	Q9GZZ7	299 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	OTOR	Q9NRC9	128 aa		4.11	□□□□□ -1.75
NCBP1-204	ENST00000491445	SERTM2	A0A1B0GWG4	89 aa		4.1	□□□□□ -1.75
NCBP1-204	ENST00000491445	GAGE12H	A6NDE8	117 aa		4.1	□□□□□ -1.75
NCBP1-204	ENST00000491445	CRYGA	P11844	174 aa		4.1	□□□□□ -1.75
NCBP1-204	ENST00000491445	S100A11	P31949	105 aa		4.1	□□□□□ -1.75
NCBP1-204	ENST00000491445	RAB2A	P61019	212 aa		4.1	□□□□□ -1.75
NCBP1-204	ENST00000491445	IQCJ	Q1A5X6	159 aa		4.1	□□□□□ -1.75
NCBP1-204	ENST00000491445	C1orf137	Q5JT78	98 aa		4.1	□□□□□ -1.75
NCBP1-204	ENST00000491445	SPANXN2	Q5MJ10	180 aa		4.1	□□□□□ -1.75
NCBP1-204	ENST00000491445	FAM162B	Q5T6X4	162 aa		4.1	□□□□□ -1.75
NCBP1-204	ENST00000491445	SREK1IP1	Q8N9Q2	155 aa	Predicted RBP	4.1	□□□□□ -1.75
NCBP1-204	ENST00000491445	NDFIP1	Q9BT67	221 aa		4.1	□□□□□ -1.75
NCBP1-204	ENST00000491445	MCUB	Q9NWR8	336 aa		4.1	□□□□□ -1.75
NCBP1-204	ENST00000491445	TRBV25-1	A0A075B6N4	114 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	IGKV3D-20	A0A0C4DH25	116 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	GCG	P01275	180 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	S100A4	P26447	101 aa	Known RBP	4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	FAU	P35544	74 aa	Known RBP	4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	PTTG1IP	P53801	180 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	BAX	Q07812	192 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	ATP6V1F	Q16864	119 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	FAM74A1	Q5RGS3	127 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	GOLT1A	Q6ZVE7	132 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	NEXN-AS1	Q8NBZ9	246 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	CMTM2	Q8TAZ6	248 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	DEDD2	Q8WXF8	326 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	BCL7B	Q9BQE9	202 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	NPCDR1	Q9BY65	106 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	NMES1	Q9C002	83 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	C11orf1	Q9H5F2	150 aa		4.09	□□□□□ -1.75
NCBP1-204	ENST00000491445	UBE2L5P	A0A1B0GUS4	154 aa		4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445		A0A1W2PNN7	141 aa		4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	C9orf170	A2RU37	121 aa		4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	OR7C2	O60412	319 aa		4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	AMT	P48728	403 aa		4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	RAB4B	P61018	213 aa		4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	VBP1	P61758	197 aa		4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	UBE2L3	P68036	154 aa	Known RBP	4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	GAGE6	Q13070	117 aa		4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	IAH1	Q2TAA2	248 aa	Predicted RBP	4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	SMUG1	Q53HV7	270 aa		4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	FAM74A4	Q5TZK3	123 aa		4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	OR5C1	Q8NGR4	320 aa		4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	MED28	Q9H204	178 aa		4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	RPP21	Q9H633	154 aa	Known RBP	4.08	□□□□□ -1.76
NCBP1-204	ENST00000491445	TRBV6-1	A0A0K0K1D8	114 aa		4.07	□□□□□ -1.76
NCBP1-204	ENST00000491445	CST7	O76096	145 aa		4.07	□□□□□ -1.76
NCBP1-204	ENST00000491445	SCGB1D2	O95969	90 aa		4.07	□□□□□ -1.76
NCBP1-204	ENST00000491445	FGF7	P21781	194 aa		4.07	□□□□□ -1.76
NCBP1-204	ENST00000491445	SULT1A1	P50225	295 aa		4.07	□□□□□ -1.76
NCBP1-204	ENST00000491445	HBG1	P69891	147 aa		4.07	□□□□□ -1.76
NCBP1-204	ENST00000491445	HBG2	P69892	147 aa		4.07	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms