RNA–Protein interactions for RNA: ENST00000491183.5

HMGN1-219, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 527 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-219ENST00000491183 XGP55808 180 aa12.04□□□□□ -0.48
HMGN1-219ENST00000491183 SFRP2Q96HF1 295 aa12.04□□□□□ -0.48
HMGN1-219ENST00000491183 Q9HAA7 133 aa12.04□□□□□ -0.48
HMGN1-219ENST00000491183 SCO2A0A1W2PP80 73 aa12.03□□□□□ -0.48
HMGN1-219ENST00000491183 KANTRA0A1W2PQU2 76 aa12.03□□□□□ -0.48
HMGN1-219ENST00000491183 TPT1P13693 172 aaKnown RBP12.03□□□□□ -0.48
HMGN1-219ENST00000491183 PHLDA3Q9Y5J5 127 aa12.03□□□□□ -0.48
HMGN1-219ENST00000491183 A0A087WWL8 130 aa12.02□□□□□ -0.49
HMGN1-219ENST00000491183 M0R381 172 aa12.02□□□□□ -0.49
HMGN1-219ENST00000491183 RHODO00212 210 aa12.02□□□□□ -0.49
HMGN1-219ENST00000491183 PSCAO43653 123 aa12.02□□□□□ -0.49
HMGN1-219ENST00000491183 H2AFB1P0C5Y9 115 aa12.02□□□□□ -0.49
HMGN1-219ENST00000491183 FAM74A4Q5TZK3 123 aa12.02□□□□□ -0.49
HMGN1-219ENST00000491183 TMUB2Q71RG4 321 aa12.02□□□□□ -0.49
HMGN1-219ENST00000491183 MLST8Q9BVC4 326 aa12.02□□□□□ -0.49
HMGN1-219ENST00000491183 S100A9P06702 114 aaKnown RBP12.01□□□□□ -0.49
HMGN1-219ENST00000491183 GCSHP23434 173 aa12□□□□□ -0.49
HMGN1-219ENST00000491183 RPL19P84098 196 aaKnown RBP12□□□□□ -0.49
HMGN1-219ENST00000491183 BAGE2Q86Y30 109 aa12□□□□□ -0.49
HMGN1-219ENST00000491183 ZFP82Q8N141 532 aa12□□□□□ -0.49
HMGN1-219ENST00000491183 PFDN1O60925 122 aa11.99□□□□□ -0.49
HMGN1-219ENST00000491183 EIF5AP63241 154 aaKnown RBP11.99□□□□□ -0.49
HMGN1-219ENST00000491183 CCL20P78556 96 aa11.99□□□□□ -0.49
HMGN1-219ENST00000491183 LAGE3Q14657 143 aa11.99□□□□□ -0.49
HMGN1-219ENST00000491183 DAZ4Q86SG3 579 aaKnown RBP11.99□□□□□ -0.49
HMGN1-219ENST00000491183 DAZ3Q9NR90 486 aaKnown RBP11.99□□□□□ -0.49
HMGN1-219ENST00000491183 A0A087WWC5 75 aa11.98□□□□□ -0.49
HMGN1-219ENST00000491183 Q8N814 137 aa11.97□□□□□ -0.49
HMGN1-219ENST00000491183 OR10AG1Q8NH19 301 aa11.97□□□□□ -0.49
HMGN1-219ENST00000491183 IGLV5-52A0A0A0MRZ9 124 aa11.96□□□□□ -0.49
HMGN1-219ENST00000491183 CXCL1P09341 107 aa11.96□□□□□ -0.49
HMGN1-219ENST00000491183 WFDC2Q14508 124 aa11.96□□□□□ -0.49
HMGN1-219ENST00000491183 SSBP4Q9BWG4 385 aaPredicted RBP11.96□□□□□ -0.49
HMGN1-219ENST00000491183 TM2D2Q9BX73 214 aa11.96□□□□□ -0.49
HMGN1-219ENST00000491183 TRAV1-1A0A0B4J248 108 aa11.95□□□□□ -0.5
HMGN1-219ENST00000491183 TRBV10-1A0A0K0K1A3 114 aa11.95□□□□□ -0.5
HMGN1-219ENST00000491183 EPM2AB3EWF7 344 aa11.95□□□□□ -0.5
HMGN1-219ENST00000491183 SNAI2O43623 268 aa11.95□□□□□ -0.5
HMGN1-219ENST00000491183 PRR27Q6MZM9 219 aa11.95□□□□□ -0.5
HMGN1-219ENST00000491183 NIT1Q86X76 327 aa11.95□□□□□ -0.5
HMGN1-219ENST00000491183 NTN5Q8WTR8 489 aaPredicted RBP11.95□□□□□ -0.5
HMGN1-219ENST00000491183 GNG13Q9P2W3 67 aa11.95□□□□□ -0.5
HMGN1-219ENST00000491183 TRAV8-3A0A0A6YYJ7 113 aa11.94□□□□□ -0.5
HMGN1-219ENST00000491183 MUC21A0A0G2JKD1 596 aa11.94□□□□□ -0.5
HMGN1-219ENST00000491183 MUC21A0A140T8X8 626 aa11.94□□□□□ -0.5
HMGN1-219ENST00000491183 RPL35P42766 123 aaKnown RBP11.94□□□□□ -0.5
HMGN1-219ENST00000491183 UBE2D3P61077 147 aa11.94□□□□□ -0.5
HMGN1-219ENST00000491183 UBE2D2P62837 147 aa11.94□□□□□ -0.5
HMGN1-219ENST00000491183 C11orf52Q96A22 123 aa11.94□□□□□ -0.5
HMGN1-219ENST00000491183 DERL1Q9BUN8 251 aa11.94□□□□□ -0.5
HMGN1-219ENST00000491183 TRBV7-3A0A075B6L6 115 aa11.93□□□□□ -0.5
HMGN1-219ENST00000491183 RAB4BP61018 213 aa11.93□□□□□ -0.5
HMGN1-219ENST00000491183 RPL36AP83881 106 aaKnown RBP11.93□□□□□ -0.5
HMGN1-219ENST00000491183 RPL36ALQ969Q0 106 aaKnown RBP11.93□□□□□ -0.5
HMGN1-219ENST00000491183 DNAJC30Q96LL9 226 aa11.93□□□□□ -0.5
HMGN1-219ENST00000491183 MANBALQ9NQG1 85 aa11.93□□□□□ -0.5
HMGN1-219ENST00000491183 OR5AL1P0C617 328 aa11.92□□□□□ -0.5
HMGN1-219ENST00000491183 OR10G8Q8NGN5 311 aa11.92□□□□□ -0.5
HMGN1-219ENST00000491183 IGLV2-8P01709 118 aa11.91□□□□□ -0.5
HMGN1-219ENST00000491183 SULT1A2P50226 295 aa11.91□□□□□ -0.5
HMGN1-219ENST00000491183 RAB5CP51148 216 aa11.91□□□□□ -0.5
HMGN1-219ENST00000491183 HAMPP81172 84 aa11.91□□□□□ -0.5
HMGN1-219ENST00000491183 TOR2AQ5JU69 321 aa11.91□□□□□ -0.5
HMGN1-219ENST00000491183 NEXN-AS1Q8NBZ9 246 aa11.91□□□□□ -0.5
HMGN1-219ENST00000491183 LECT2O14960 151 aa11.9□□□□□ -0.5
HMGN1-219ENST00000491183 SMR3BP02814 79 aaPredicted RBP11.9□□□□□ -0.5
HMGN1-219ENST00000491183 SSTP61278 116 aa11.9□□□□□ -0.5
HMGN1-219ENST00000491183 FAT1Q14517 4588 aa11.9□□□□□ -0.5
HMGN1-219ENST00000491183 SPANXN1Q5VSR9 72 aa11.9□□□□□ -0.5
HMGN1-219ENST00000491183 TCTE3Q8IZS6 198 aa11.9□□□□□ -0.5
HMGN1-219ENST00000491183 FAM30AQ9NZY2 134 aa11.9□□□□□ -0.5
HMGN1-219ENST00000491183 KLK12Q9UKR0 248 aa11.9□□□□□ -0.5
HMGN1-219ENST00000491183 KIF25-AS1Q9Y6Z4 181 aa11.9□□□□□ -0.5
HMGN1-219ENST00000491183 URGCP-MRPS24S4R325 110 aa11.9□□□□□ -0.5
HMGN1-219ENST00000491183 RAB19A4D1S5 217 aa11.89□□□□□ -0.51
HMGN1-219ENST00000491183 ZNF56Q15929 161 aa11.89□□□□□ -0.51
HMGN1-219ENST00000491183 CENPWQ5EE01 88 aa11.89□□□□□ -0.51
HMGN1-219ENST00000491183 EIF5AL1Q6IS14 154 aaKnown RBP11.89□□□□□ -0.51
HMGN1-219ENST00000491183 BAALCQ8WXS3 180 aa11.89□□□□□ -0.51
HMGN1-219ENST00000491183 TMEM70Q9BUB7 260 aa11.89□□□□□ -0.51
HMGN1-219ENST00000491183 GZMBP10144 247 aa11.88□□□□□ -0.51
HMGN1-219ENST00000491183 Q5VSD8 79 aa11.88□□□□□ -0.51
HMGN1-219ENST00000491183 A0A087WX48 190 aa11.87□□□□□ -0.51
HMGN1-219ENST00000491183 TRBV6-8A0A0A6YYG3 113 aa11.87□□□□□ -0.51
HMGN1-219ENST00000491183 C19orf71A6NCJ1 209 aa11.87□□□□□ -0.51
HMGN1-219ENST00000491183 FRZBQ92765 325 aa11.87□□□□□ -0.51
HMGN1-219ENST00000491183 CHCHD7Q9BUK0 85 aa11.87□□□□□ -0.51
HMGN1-219ENST00000491183 RBFOX3A6NFN3 312 aa11.86□□□□□ -0.51
HMGN1-219ENST00000491183 F5H697 171 aa11.86□□□□□ -0.51
HMGN1-219ENST00000491183 TEX46H3BTG2 121 aa11.86□□□□□ -0.51
HMGN1-219ENST00000491183 IGLC6P0CF74 106 aa11.86□□□□□ -0.51
HMGN1-219ENST00000491183 MEF2BQ02080 365 aaPredicted RBP11.86□□□□□ -0.51
HMGN1-219ENST00000491183 UBE2WQ96B02 151 aa11.86□□□□□ -0.51
HMGN1-219ENST00000491183 COX11Q9Y6N1 276 aa11.86□□□□□ -0.51
HMGN1-219ENST00000491183 IGKV2D-24A0A075B6R9 120 aa11.85□□□□□ -0.51
HMGN1-219ENST00000491183 C1QBP02746 253 aa11.85□□□□□ -0.51
HMGN1-219ENST00000491183 INAFM2P0DMQ5 153 aa11.85□□□□□ -0.51
HMGN1-219ENST00000491183 NTM-AS1Q6ZSK4 140 aa11.85□□□□□ -0.51
HMGN1-219ENST00000491183 SLC51BQ86UW2 128 aa11.85□□□□□ -0.51
HMGN1-219ENST00000491183 OR2D3Q8NGH3 330 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms